RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 EVI5LQ96CN4 794 aa15.65■□□□□ 0.1
HIF3A-214ENST00000531043 CTAGE1Q96RT6 745 aa15.65■□□□□ 0.1
HIF3A-214ENST00000531043 HELLSQ9NRZ9 838 aa15.65■□□□□ 0.1
HIF3A-214ENST00000531043 TCP11L1Q9NUJ3 509 aa15.65■□□□□ 0.1
HIF3A-214ENST00000531043 MTCH2Q9Y6C9 303 aa15.65■□□□□ 0.1
HIF3A-214ENST00000531043 MYH6P13533 1939 aa15.64■□□□□ 0.09
HIF3A-214ENST00000531043 A6NJR5 290 aa15.64■□□□□ 0.09
HIF3A-214ENST00000531043 SUPT20HL2P0C7V6 817 aa15.64■□□□□ 0.09
HIF3A-214ENST00000531043 GOLGA8HP0CJ92 632 aa15.64■□□□□ 0.09
HIF3A-214ENST00000531043 CHMP4BP1P59074 171 aa15.64■□□□□ 0.09
HIF3A-214ENST00000531043 PDE4DQ08499 809 aa15.64■□□□□ 0.09
HIF3A-214ENST00000531043 NMIQ13287 307 aaPredicted RBP15.64■□□□□ 0.09
HIF3A-214ENST00000531043 GPNMBQ14956 572 aa15.64■□□□□ 0.09
HIF3A-214ENST00000531043 PPP2R5BQ15173 497 aa15.64■□□□□ 0.09
HIF3A-214ENST00000531043 UBA5Q9GZZ9 404 aa15.64■□□□□ 0.09
HIF3A-214ENST00000531043 GPHNQ9NQX3 736 aaPredicted RBP15.64■□□□□ 0.09
HIF3A-214ENST00000531043 MYH7BA7E2Y1 1941 aa15.64■□□□□ 0.09
HIF3A-214ENST00000531043 KIAA1217Q5T5P2 1943 aa15.64■□□□□ 0.09
HIF3A-214ENST00000531043 LOC102724159A0A0B4J2E5 919 aa15.63■□□□□ 0.09
HIF3A-214ENST00000531043 PFKMP08237 780 aa15.63■□□□□ 0.09
HIF3A-214ENST00000531043 SNHG28P0DPA3 235 aa15.63■□□□□ 0.09
HIF3A-214ENST00000531043 TXNP10599 105 aaKnown RBP15.63■□□□□ 0.09
HIF3A-214ENST00000531043 TAP1Q03518 808 aa15.63■□□□□ 0.09
HIF3A-214ENST00000531043 PWP2Q15269 919 aaKnown RBP15.63■□□□□ 0.09
HIF3A-214ENST00000531043 USH1GQ495M9 461 aa15.63■□□□□ 0.09
HIF3A-214ENST00000531043 MCMDC2Q4G0Z9 681 aa15.63■□□□□ 0.09
HIF3A-214ENST00000531043 NFRKBQ6P4R8 1299 aa15.63■□□□□ 0.09
HIF3A-214ENST00000531043 TMCO2Q7Z6W1 182 aaPredicted RBP15.63■□□□□ 0.09
HIF3A-214ENST00000531043 ARNTL2Q8WYA1 636 aa15.63■□□□□ 0.09
HIF3A-214ENST00000531043 ZKSCAN3Q9BRR0 538 aa15.63■□□□□ 0.09
HIF3A-214ENST00000531043 COL20A1Q9P218 1284 aa15.63■□□□□ 0.09
HIF3A-214ENST00000531043 SKIV2LQ15477 1246 aaKnown RBP15.62■□□□□ 0.09
HIF3A-214ENST00000531043 TCTN1Q2MV58 587 aa15.62■□□□□ 0.09
HIF3A-214ENST00000531043 CCDC62Q6P9F0 684 aa15.62■□□□□ 0.09
HIF3A-214ENST00000531043 SCFD2Q8WU76 684 aa15.62■□□□□ 0.09
HIF3A-214ENST00000531043 AFG1LQ8WV93 481 aa15.62■□□□□ 0.09
HIF3A-214ENST00000531043 DHX38Q92620 1227 aaKnown RBP15.62■□□□□ 0.09
HIF3A-214ENST00000531043 FTOQ9C0B1 505 aaKnown RBP eCLIP15.62■□□□□ 0.09
HIF3A-214ENST00000531043 NEDD4P46934 1319 aa15.62■□□□□ 0.09
HIF3A-214ENST00000531043 WDR19Q8NEZ3 1342 aa15.62■□□□□ 0.09
HIF3A-214ENST00000531043 BAZ2BQ9UIF8 2168 aaKnown RBP15.61■□□□□ 0.09
HIF3A-214ENST00000531043 LCHNA4D1U4 455 aa15.61■□□□□ 0.09
HIF3A-214ENST00000531043 NKRFO15226 690 aaKnown RBP eCLIP15.61■□□□□ 0.09
HIF3A-214ENST00000531043 LY6KQ17RY6 165 aa15.61■□□□□ 0.09
HIF3A-214ENST00000531043 GDF6Q6KF10 455 aaPredicted RBP15.61■□□□□ 0.09
HIF3A-214ENST00000531043 HERC6Q8IVU3 1022 aa15.61■□□□□ 0.09
HIF3A-214ENST00000531043 RETREG2Q8NC44 543 aa15.61■□□□□ 0.09
HIF3A-214ENST00000531043 DNERQ8NFT8 737 aa15.61■□□□□ 0.09
HIF3A-214ENST00000531043 KAT2BQ92831 832 aa15.61■□□□□ 0.09
HIF3A-214ENST00000531043 TAAR1Q96RJ0 339 aa15.61■□□□□ 0.09
HIF3A-214ENST00000531043 CRBNQ96SW2 442 aa15.61■□□□□ 0.09
HIF3A-214ENST00000531043 SLC9A7Q96T83 725 aa15.61■□□□□ 0.09
HIF3A-214ENST00000531043 COL4A4P53420 1690 aaPredicted RBP15.6■□□□□ 0.09
HIF3A-214ENST00000531043 MYO7AQ13402 2215 aa15.6■□□□□ 0.09
HIF3A-214ENST00000531043 PITPNM1O00562 1244 aa15.6■□□□□ 0.09
HIF3A-214ENST00000531043 LPXNO60711 386 aa15.6■□□□□ 0.09
HIF3A-214ENST00000531043 ACTN1P12814 892 aa15.6■□□□□ 0.09
HIF3A-214ENST00000531043 POU3F3P20264 500 aaPredicted RBP15.6■□□□□ 0.09
HIF3A-214ENST00000531043 RFC2P35250 354 aa15.6■□□□□ 0.09
HIF3A-214ENST00000531043 PTGISQ16647 500 aa15.6■□□□□ 0.09
HIF3A-214ENST00000531043 SEPT14Q6ZU15 432 aa15.6■□□□□ 0.09
HIF3A-214ENST00000531043 IL27Q8NEV9 243 aa15.6■□□□□ 0.09
HIF3A-214ENST00000531043 SYTL5Q8TDW5 730 aaPredicted RBP15.6■□□□□ 0.09
HIF3A-214ENST00000531043 CCDC171Q6TFL3 1326 aa15.6■□□□□ 0.09
HIF3A-214ENST00000531043 KPNA6O60684 536 aa15.59■□□□□ 0.09
HIF3A-214ENST00000531043 MMP3P08254 477 aa15.59■□□□□ 0.09
HIF3A-214ENST00000531043 PTPN11Q06124 597 aaPredicted RBP15.59■□□□□ 0.09
HIF3A-214ENST00000531043 ARHGAP1Q07960 439 aa15.59■□□□□ 0.09
HIF3A-214ENST00000531043 GRB10Q13322 594 aa15.59■□□□□ 0.09
HIF3A-214ENST00000531043 CDC37Q16543 378 aaPredicted RBP15.59■□□□□ 0.09
HIF3A-214ENST00000531043 BRDTQ58F21 947 aaPredicted RBP15.59■□□□□ 0.09
HIF3A-214ENST00000531043 MFSD6Q6ZSS7 791 aa15.59■□□□□ 0.09
HIF3A-214ENST00000531043 CHST3Q7LGC8 479 aa15.59■□□□□ 0.09
HIF3A-214ENST00000531043 PHOSPHO2Q8TCD6 241 aa15.59■□□□□ 0.09
HIF3A-214ENST00000531043 TTC14Q96N46 770 aa15.59■□□□□ 0.09
HIF3A-214ENST00000531043 TSPYL2Q9H2G4 693 aaPredicted RBP15.59■□□□□ 0.09
HIF3A-214ENST00000531043 ZMYM6O95789 1325 aa15.59■□□□□ 0.09
HIF3A-214ENST00000531043 RAD50Q92878 1312 aa15.59■□□□□ 0.09
HIF3A-214ENST00000531043 DEFB103AP81534 67 aa15.58■□□□□ 0.08
HIF3A-214ENST00000531043 BFSP2Q13515 415 aa15.58■□□□□ 0.08
HIF3A-214ENST00000531043 RGS22Q8NE09 1264 aa15.58■□□□□ 0.08
HIF3A-214ENST00000531043 WNT8BQ93098 351 aa15.58■□□□□ 0.08
HIF3A-214ENST00000531043 LNPKQ9C0E8 428 aa15.58■□□□□ 0.08
HIF3A-214ENST00000531043 EPHX3Q9H6B9 360 aa15.58■□□□□ 0.08
HIF3A-214ENST00000531043 NOD1Q9Y239 953 aa15.58■□□□□ 0.08
HIF3A-214ENST00000531043 LAMA4Q16363 1823 aa15.58■□□□□ 0.08
HIF3A-214ENST00000531043 GTPBP6O43824 516 aaPredicted RBP15.57■□□□□ 0.08
HIF3A-214ENST00000531043 NBNO60934 754 aa15.57■□□□□ 0.08
HIF3A-214ENST00000531043 RRP1P56182 461 aaKnown RBP15.57■□□□□ 0.08
HIF3A-214ENST00000531043 WDR5P61964 334 aaKnown RBP15.57■□□□□ 0.08
HIF3A-214ENST00000531043 ADGRF4Q8IZF3 695 aa15.57■□□□□ 0.08
HIF3A-214ENST00000531043 KHSRPQ92945 711 aaKnown RBP eCLIP15.57■□□□□ 0.08
HIF3A-214ENST00000531043 RILPL2Q969X0 211 aa15.57■□□□□ 0.08
HIF3A-214ENST00000531043 HDAC6Q9UBN7 1215 aa15.57■□□□□ 0.08
HIF3A-214ENST00000531043 PNMA2Q9UL42 364 aa15.57■□□□□ 0.08
HIF3A-214ENST00000531043 TRIM6-TRIM34B2RNG4 842 aa15.56■□□□□ 0.08
HIF3A-214ENST00000531043 B4E1Z4 1266 aa15.56■□□□□ 0.08
HIF3A-214ENST00000531043 TLL1O43897 1013 aa15.56■□□□□ 0.08
HIF3A-214ENST00000531043 SORBS3O60504 671 aa15.56■□□□□ 0.08
HIF3A-214ENST00000531043 GH1P01241 217 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms