RNA–Protein interactions for RNA: ENST00000529073.5

CCDC90B-211, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5 BASIC

Gene CCDC90B, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-211ENST00000529073 KIF2CQ99661 725 aa13.21□□□□□ -0.29
CCDC90B-211ENST00000529073 MTA3Q9BTC8 594 aa13.21□□□□□ -0.29
CCDC90B-211ENST00000529073 XPNPEP3Q9NQH7 507 aa13.21□□□□□ -0.29
CCDC90B-211ENST00000529073 TPCN1Q9ULQ1 816 aa13.21□□□□□ -0.29
CCDC90B-211ENST00000529073 CNPY2Q9Y2B0 182 aa13.21□□□□□ -0.29
CCDC90B-211ENST00000529073 RGS20O76081 388 aa13.2□□□□□ -0.3
CCDC90B-211ENST00000529073 AKR1A1P14550 325 aa13.2□□□□□ -0.3
CCDC90B-211ENST00000529073 KIF5BP33176 963 aa13.2□□□□□ -0.3
CCDC90B-211ENST00000529073 METAP2P50579 478 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCDC90B-211ENST00000529073 FGD1P98174 961 aa13.2□□□□□ -0.3
CCDC90B-211ENST00000529073 NTRK3Q16288 839 aa13.2□□□□□ -0.3
CCDC90B-211ENST00000529073 PKN1Q16512 942 aa13.2□□□□□ -0.3
CCDC90B-211ENST00000529073 MAP3K14Q99558 947 aa13.2□□□□□ -0.3
CCDC90B-211ENST00000529073 SENP6Q9GZR1 1112 aaPredicted RBP13.2□□□□□ -0.3
CCDC90B-211ENST00000529073 C11orf49Q9H6J7 331 aa13.2□□□□□ -0.3
CCDC90B-211ENST00000529073 PXMP2Q9NR77 195 aa13.2□□□□□ -0.3
CCDC90B-211ENST00000529073 PDRG1Q9NUG6 133 aa13.2□□□□□ -0.3
CCDC90B-211ENST00000529073 TMEM260Q9NX78 707 aa13.2□□□□□ -0.3
CCDC90B-211ENST00000529073 MRPL11Q9Y3B7 192 aaKnown RBP13.2□□□□□ -0.3
CCDC90B-211ENST00000529073 V9GY48 417 aaPredicted RBP13.2□□□□□ -0.3
CCDC90B-211ENST00000529073 STXBP3O00186 592 aa13.19□□□□□ -0.3
CCDC90B-211ENST00000529073 MEIS2O14770 477 aa13.19□□□□□ -0.3
CCDC90B-211ENST00000529073 SYN1P17600 705 aa13.19□□□□□ -0.3
CCDC90B-211ENST00000529073 C7orf61Q8IZ16 206 aa13.19□□□□□ -0.3
CCDC90B-211ENST00000529073 TMTC2Q8N394 836 aa13.19□□□□□ -0.3
CCDC90B-211ENST00000529073 NECAB1Q8N987 351 aa13.19□□□□□ -0.3
CCDC90B-211ENST00000529073 RMDN3Q96TC7 470 aa13.19□□□□□ -0.3
CCDC90B-211ENST00000529073 GJB4Q9NTQ9 266 aa13.19□□□□□ -0.3
CCDC90B-211ENST00000529073 FAM184BQ9ULE4 1060 aa13.19□□□□□ -0.3
CCDC90B-211ENST00000529073 ZMYND8Q9ULU4 1186 aaPredicted RBP13.19□□□□□ -0.3
CCDC90B-211ENST00000529073 GNEQ9Y223 722 aaKnown RBP13.19□□□□□ -0.3
CCDC90B-211ENST00000529073 CYP46A1Q9Y6A2 500 aa13.19□□□□□ -0.3
CCDC90B-211ENST00000529073 KIAA1217Q5T5P2 1943 aa13.19□□□□□ -0.3
CCDC90B-211ENST00000529073 H0YGN5 161 aa13.18□□□□□ -0.3
CCDC90B-211ENST00000529073 HMGB1P09429 215 aaKnown RBP13.18□□□□□ -0.3
CCDC90B-211ENST00000529073 CALM1P0DP23 149 aa13.18□□□□□ -0.3
CCDC90B-211ENST00000529073 CALM2P0DP24 149 aa13.18□□□□□ -0.3
CCDC90B-211ENST00000529073 CALM3P0DP25 149 aa13.18□□□□□ -0.3
CCDC90B-211ENST00000529073 RARBP10826 455 aa13.18□□□□□ -0.3
CCDC90B-211ENST00000529073 MYCLP12524 364 aaPredicted RBP13.18□□□□□ -0.3
CCDC90B-211ENST00000529073 GHRHRQ02643 423 aa13.18□□□□□ -0.3
CCDC90B-211ENST00000529073 TNFAIP2Q03169 654 aa13.18□□□□□ -0.3
CCDC90B-211ENST00000529073 PDE4DQ08499 809 aa13.18□□□□□ -0.3
CCDC90B-211ENST00000529073 CCSAPQ6IQ19 270 aaPredicted RBP13.18□□□□□ -0.3
CCDC90B-211ENST00000529073 SEPT14Q6ZU15 432 aa13.18□□□□□ -0.3
CCDC90B-211ENST00000529073 NECAB2Q7Z6G3 386 aa13.18□□□□□ -0.3
CCDC90B-211ENST00000529073 RASGRP4Q8TDF6 673 aa13.18□□□□□ -0.3
CCDC90B-211ENST00000529073 UIMC1Q96RL1 719 aa13.18□□□□□ -0.3
CCDC90B-211ENST00000529073 PDCD2LQ9BRP1 358 aa13.18□□□□□ -0.3
CCDC90B-211ENST00000529073 TM6SF1Q9BZW5 370 aa13.18□□□□□ -0.3
CCDC90B-211ENST00000529073 ABHD16BQ9H3Z7 469 aa13.18□□□□□ -0.3
CCDC90B-211ENST00000529073 A0A1W2PQ45 241 aaPredicted RBP13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 A0A1W2PQY0 241 aa13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 ASB14A6NK59 587 aa13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 DNM1LO00429 736 aa13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 CTDNEP1O95476 244 aa13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 C6orf222P0C671 652 aaPredicted RBP13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 PSMA5P28066 241 aa13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 FOSBP53539 338 aa13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 PSMC6P62333 389 aa13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 MRPS9P82933 396 aaKnown RBP13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 SCRN1Q12765 414 aa13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 SEMA3FQ13275 785 aa13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 PGM5Q15124 567 aa13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 LY6KQ17RY6 165 aa13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 ARHGEF16Q5VV41 709 aa13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 SYNE3Q6ZMZ3 975 aa13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 TLK2Q86UE8 772 aa13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 MSL3Q8N5Y2 521 aaKnown RBP13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 ZNF579Q8NAF0 562 aaKnown RBP13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 RGS22Q8NE09 1264 aa13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 KLHDC9Q8NEP7 349 aa13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 DPF3Q92784 378 aa13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 SLC26A6Q9BXS9 759 aa13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 UPF3AQ9H1J1 476 aaKnown RBP13.17□□□□□ -0.3
CCDC90B-211ENST00000529073 LTBP2Q14767 1821 aa13.16□□□□□ -0.3
CCDC90B-211ENST00000529073 GCOM1H8Y6P7 765 aaPredicted RBP13.16□□□□□ -0.3
CCDC90B-211ENST00000529073 DYNC1LI2O43237 492 aaPredicted RBP13.16□□□□□ -0.3
CCDC90B-211ENST00000529073 EPB41L2O43491 1005 aaKnown RBP13.16□□□□□ -0.3
CCDC90B-211ENST00000529073 CD2BP2O95400 341 aaKnown RBP13.16□□□□□ -0.3
CCDC90B-211ENST00000529073 NR3C2P08235 984 aa13.16□□□□□ -0.3
CCDC90B-211ENST00000529073 POLR2MP0CAP2 368 aa13.16□□□□□ -0.3
CCDC90B-211ENST00000529073 GNAQP50148 359 aa13.16□□□□□ -0.3
CCDC90B-211ENST00000529073 EVCP57679 992 aa13.16□□□□□ -0.3
CCDC90B-211ENST00000529073 KCNA10Q16322 511 aa13.16□□□□□ -0.3
CCDC90B-211ENST00000529073 TRIM60Q495X7 471 aa13.16□□□□□ -0.3
CCDC90B-211ENST00000529073 SH3RF1Q7Z6J0 888 aa13.16□□□□□ -0.3
CCDC90B-211ENST00000529073 ANKLE1Q8NAG6 615 aa13.16□□□□□ -0.3
CCDC90B-211ENST00000529073 IL17RAQ96F46 866 aa13.16□□□□□ -0.3
CCDC90B-211ENST00000529073 WDR11Q9BZH6 1224 aa13.16□□□□□ -0.3
CCDC90B-211ENST00000529073 VTA1Q9NP79 307 aa13.16□□□□□ -0.3
CCDC90B-211ENST00000529073 RBM28Q9NW13 759 aaKnown RBP13.16□□□□□ -0.3
CCDC90B-211ENST00000529073 RTEL1Q9NZ71 1219 aa13.16□□□□□ -0.3
CCDC90B-211ENST00000529073 ADD3Q9UEY8 706 aaKnown RBP13.16□□□□□ -0.3
CCDC90B-211ENST00000529073 SEC63Q9UGP8 760 aaKnown RBP13.16□□□□□ -0.3
CCDC90B-211ENST00000529073 PDE4DIPQ5VU43 2346 aa13.16□□□□□ -0.3
CCDC90B-211ENST00000529073 GRIN2DO15399 1336 aa13.15□□□□□ -0.3
CCDC90B-211ENST00000529073 FRMPD4Q14CM0 1322 aa13.15□□□□□ -0.3
CCDC90B-211ENST00000529073 RBM47A0AV96 593 aaKnown RBP13.15□□□□□ -0.3
CCDC90B-211ENST00000529073 DUSP11O75319 330 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms