RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 IGHDP01880 384 aa11.26□□□□□ -0.61
TRAPPC4-206ENST00000525303 CA3P07451 260 aa11.26□□□□□ -0.61
TRAPPC4-206ENST00000525303 FGRP09769 529 aa11.26□□□□□ -0.61
TRAPPC4-206ENST00000525303 TOP1P11387 765 aaKnown RBP11.26□□□□□ -0.61
TRAPPC4-206ENST00000525303 PWP2Q15269 919 aaKnown RBP11.26□□□□□ -0.61
TRAPPC4-206ENST00000525303 TMEM67Q5HYA8 995 aa11.26□□□□□ -0.61
TRAPPC4-206ENST00000525303 ANKRD45Q5TZF3 282 aa11.26□□□□□ -0.61
TRAPPC4-206ENST00000525303 RNF207Q6ZRF8 634 aa11.26□□□□□ -0.61
TRAPPC4-206ENST00000525303 CLEC4DQ8WXI8 215 aa11.26□□□□□ -0.61
TRAPPC4-206ENST00000525303 SALL3Q9BXA9 1300 aa11.26□□□□□ -0.61
TRAPPC4-206ENST00000525303 MICAL3Q7RTP6 2002 aa11.26□□□□□ -0.61
TRAPPC4-206ENST00000525303 KAT6AQ92794 2004 aa11.26□□□□□ -0.61
TRAPPC4-206ENST00000525303 NLRC5Q86WI3 1866 aa11.25□□□□□ -0.61
TRAPPC4-206ENST00000525303 RFXAPO00287 272 aa11.25□□□□□ -0.61
TRAPPC4-206ENST00000525303 FGAP02671 866 aa11.25□□□□□ -0.61
TRAPPC4-206ENST00000525303 PDHBP11177 359 aa11.25□□□□□ -0.61
TRAPPC4-206ENST00000525303 ACTN1P12814 892 aa11.25□□□□□ -0.61
TRAPPC4-206ENST00000525303 RPS6P62753 249 aaKnown RBP11.25□□□□□ -0.61
TRAPPC4-206ENST00000525303 TFF2Q03403 129 aa11.25□□□□□ -0.61
TRAPPC4-206ENST00000525303 PDE4DQ08499 809 aa11.25□□□□□ -0.61
TRAPPC4-206ENST00000525303 PPP2R5BQ15173 497 aa11.25□□□□□ -0.61
TRAPPC4-206ENST00000525303 ALX1Q15699 326 aa11.25□□□□□ -0.61
TRAPPC4-206ENST00000525303 NBPF20Q3BBV1 942 aa11.25□□□□□ -0.61
TRAPPC4-206ENST00000525303 BRDTQ58F21 947 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC4-206ENST00000525303 COPS5Q92905 334 aa11.25□□□□□ -0.61
TRAPPC4-206ENST00000525303 EVI5LQ96CN4 794 aa11.25□□□□□ -0.61
TRAPPC4-206ENST00000525303 MPHOSPH6Q99547 160 aaKnown RBP11.25□□□□□ -0.61
TRAPPC4-206ENST00000525303 CERS4Q9HA82 394 aa11.25□□□□□ -0.61
TRAPPC4-206ENST00000525303 HELLSQ9NRZ9 838 aa11.25□□□□□ -0.61
TRAPPC4-206ENST00000525303 RAPGEFL1Q9UHV5 662 aa11.25□□□□□ -0.61
TRAPPC4-206ENST00000525303 BAZ2BQ9UIF8 2168 aaKnown RBP11.25□□□□□ -0.61
TRAPPC4-206ENST00000525303 RAD50Q92878 1312 aa11.25□□□□□ -0.61
TRAPPC4-206ENST00000525303 A0A0D9SFI3 127 aa11.24□□□□□ -0.61
TRAPPC4-206ENST00000525303 PITPNM1O00562 1244 aa11.24□□□□□ -0.61
TRAPPC4-206ENST00000525303 NKRFO15226 690 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRAPPC4-206ENST00000525303 IQCF3P0C7M6 154 aa11.24□□□□□ -0.61
TRAPPC4-206ENST00000525303 RFC2P35250 354 aa11.24□□□□□ -0.61
TRAPPC4-206ENST00000525303 HAND2P61296 217 aa11.24□□□□□ -0.61
TRAPPC4-206ENST00000525303 NUCB1Q02818 461 aa11.24□□□□□ -0.61
TRAPPC4-206ENST00000525303 ZNF543Q08ER8 600 aa11.24□□□□□ -0.61
TRAPPC4-206ENST00000525303 SKIV2LQ15477 1246 aaKnown RBP11.24□□□□□ -0.61
TRAPPC4-206ENST00000525303 NFRKBQ6P4R8 1299 aa11.24□□□□□ -0.61
TRAPPC4-206ENST00000525303 SCFD2Q8WU76 684 aa11.24□□□□□ -0.61
TRAPPC4-206ENST00000525303 FAM227BQ96M60 508 aa11.24□□□□□ -0.61
TRAPPC4-206ENST00000525303 NECAB3Q96P71 396 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC4-206ENST00000525303 SLC9A7Q96T83 725 aa11.24□□□□□ -0.61
TRAPPC4-206ENST00000525303 TCP11L1Q9NUJ3 509 aa11.24□□□□□ -0.61
TRAPPC4-206ENST00000525303 A6NJR5 290 aa11.23□□□□□ -0.61
TRAPPC4-206ENST00000525303 KPNA6O60684 536 aa11.23□□□□□ -0.61
TRAPPC4-206ENST00000525303 TXNP10599 105 aaKnown RBP11.23□□□□□ -0.61
TRAPPC4-206ENST00000525303 HSPD1P10809 573 aaKnown RBP11.23□□□□□ -0.61
TRAPPC4-206ENST00000525303 BMP1P13497 986 aa11.23□□□□□ -0.61
TRAPPC4-206ENST00000525303 EDNRBP24530 442 aa11.23□□□□□ -0.61
TRAPPC4-206ENST00000525303 KCNQ1P51787 676 aa11.23□□□□□ -0.61
TRAPPC4-206ENST00000525303 CHMP4BP1P59074 171 aa11.23□□□□□ -0.61
TRAPPC4-206ENST00000525303 PTPN11Q06124 597 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC4-206ENST00000525303 USH1GQ495M9 461 aa11.23□□□□□ -0.61
TRAPPC4-206ENST00000525303 MCMDC2Q4G0Z9 681 aa11.23□□□□□ -0.61
TRAPPC4-206ENST00000525303 B4GALNT3Q6L9W6 998 aa11.23□□□□□ -0.61
TRAPPC4-206ENST00000525303 CHD1LQ86WJ1 897 aa11.23□□□□□ -0.61
TRAPPC4-206ENST00000525303 RETREG2Q8NC44 543 aa11.23□□□□□ -0.61
TRAPPC4-206ENST00000525303 DNERQ8NFT8 737 aa11.23□□□□□ -0.61
TRAPPC4-206ENST00000525303 FTOQ9C0B1 505 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRAPPC4-206ENST00000525303 PNMA2Q9UL42 364 aa11.23□□□□□ -0.61
TRAPPC4-206ENST00000525303 NOD1Q9Y239 953 aa11.23□□□□□ -0.61
TRAPPC4-206ENST00000525303 MTCH2Q9Y6C9 303 aa11.23□□□□□ -0.61
TRAPPC4-206ENST00000525303 ZMYM6O95789 1325 aa11.23□□□□□ -0.61
TRAPPC4-206ENST00000525303 WDR19Q8NEZ3 1342 aa11.23□□□□□ -0.61
TRAPPC4-206ENST00000525303 EPOPA6NHQ4 379 aa11.22□□□□□ -0.61
TRAPPC4-206ENST00000525303 B4DLN1 442 aa11.22□□□□□ -0.61
TRAPPC4-206ENST00000525303 GTPBP6O43824 516 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC4-206ENST00000525303 ARIH2O95376 493 aa11.22□□□□□ -0.61
TRAPPC4-206ENST00000525303 SNHG28P0DPA3 235 aa11.22□□□□□ -0.61
TRAPPC4-206ENST00000525303 POU3F3P20264 500 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC4-206ENST00000525303 MRPL12P52815 198 aaKnown RBP11.22□□□□□ -0.61
TRAPPC4-206ENST00000525303 PDE1AP54750 535 aa11.22□□□□□ -0.61
TRAPPC4-206ENST00000525303 NMIQ13287 307 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC4-206ENST00000525303 PTGISQ16647 500 aa11.22□□□□□ -0.61
TRAPPC4-206ENST00000525303 AAK1Q2M2I8 961 aa11.22□□□□□ -0.61
TRAPPC4-206ENST00000525303 KRT40Q6A162 431 aa11.22□□□□□ -0.61
TRAPPC4-206ENST00000525303 MFSD6Q6ZSS7 791 aa11.22□□□□□ -0.61
TRAPPC4-206ENST00000525303 ZNF589Q86UQ0 364 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC4-206ENST00000525303 HERC6Q8IVU3 1022 aa11.22□□□□□ -0.61
TRAPPC4-206ENST00000525303 PHOSPHO2Q8TCD6 241 aa11.22□□□□□ -0.61
TRAPPC4-206ENST00000525303 ARNTL2Q8WYA1 636 aa11.22□□□□□ -0.61
TRAPPC4-206ENST00000525303 TTC14Q96N46 770 aa11.22□□□□□ -0.61
TRAPPC4-206ENST00000525303 CPVLQ9H3G5 476 aa11.22□□□□□ -0.61
TRAPPC4-206ENST00000525303 KIF28PB7ZC32 967 aa11.21□□□□□ -0.61
TRAPPC4-206ENST00000525303 ARHGEF15O94989 841 aa11.21□□□□□ -0.61
TRAPPC4-206ENST00000525303 MMP3P08254 477 aa11.21□□□□□ -0.61
TRAPPC4-206ENST00000525303 GOLGA8HP0CJ92 632 aa11.21□□□□□ -0.61
TRAPPC4-206ENST00000525303 TAP1Q03518 808 aa11.21□□□□□ -0.61
TRAPPC4-206ENST00000525303 BFSP2Q13515 415 aa11.21□□□□□ -0.61
TRAPPC4-206ENST00000525303 TBC1D10CQ8IV04 446 aa11.21□□□□□ -0.61
TRAPPC4-206ENST00000525303 ZKSCAN3Q9BRR0 538 aa11.21□□□□□ -0.61
TRAPPC4-206ENST00000525303 LNPKQ9C0E8 428 aa11.21□□□□□ -0.61
TRAPPC4-206ENST00000525303 UBA5Q9GZZ9 404 aa11.21□□□□□ -0.61
TRAPPC4-206ENST00000525303 ATG2AQ2TAZ0 1938 aa11.21□□□□□ -0.62
TRAPPC4-206ENST00000525303 NEDD4P46934 1319 aa11.2□□□□□ -0.62
TRAPPC4-206ENST00000525303 CCDC171Q6TFL3 1326 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms