RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 CDC37Q16543 378 aaPredicted RBP13.83□□□□□ -0.2
SPARC-206ENST00000524277 USH1GQ495M9 461 aa13.83□□□□□ -0.2
SPARC-206ENST00000524277 ADGRF4Q8IZF3 695 aa13.83□□□□□ -0.2
SPARC-206ENST00000524277 UBAC1Q9BSL1 405 aa13.83□□□□□ -0.2
SPARC-206ENST00000524277 UBA5Q9GZZ9 404 aa13.83□□□□□ -0.2
SPARC-206ENST00000524277 LRRC37A2A6NM11 1700 aa13.83□□□□□ -0.2
SPARC-206ENST00000524277 TNKSO95271 1327 aa13.83□□□□□ -0.2
SPARC-206ENST00000524277 B4E1Z4 1266 aa13.82□□□□□ -0.2
SPARC-206ENST00000524277 PITPNM1O00562 1244 aa13.82□□□□□ -0.2
SPARC-206ENST00000524277 ACTN1P12814 892 aa13.82□□□□□ -0.2
SPARC-206ENST00000524277 BFSP2Q13515 415 aa13.82□□□□□ -0.2
SPARC-206ENST00000524277 STXBP2Q15833 593 aa13.82□□□□□ -0.2
SPARC-206ENST00000524277 NBPF20Q3BBV1 942 aa13.82□□□□□ -0.2
SPARC-206ENST00000524277 TMEM63BQ5T3F8 832 aa13.82□□□□□ -0.2
SPARC-206ENST00000524277 FBXO11Q86XK2 927 aa13.82□□□□□ -0.2
SPARC-206ENST00000524277 ENAHQ8N8S7 591 aaPredicted RBP13.82□□□□□ -0.2
SPARC-206ENST00000524277 RETREG2Q8NC44 543 aa13.82□□□□□ -0.2
SPARC-206ENST00000524277 SYTL5Q8TDW5 730 aaPredicted RBP13.82□□□□□ -0.2
SPARC-206ENST00000524277 WNT8AQ9H1J5 351 aa13.82□□□□□ -0.2
SPARC-206ENST00000524277 SLC28A3Q9HAS3 691 aa13.82□□□□□ -0.2
SPARC-206ENST00000524277 SLC4A7Q9Y6M7 1214 aa13.82□□□□□ -0.2
SPARC-206ENST00000524277 DHX16O60231 1041 aaKnown RBP13.81□□□□□ -0.2
SPARC-206ENST00000524277 GH1P01241 217 aa13.81□□□□□ -0.2
SPARC-206ENST00000524277 TRDNQ13061 729 aa13.81□□□□□ -0.2
SPARC-206ENST00000524277 IFIT1BQ5T764 474 aaKnown RBP13.81□□□□□ -0.2
SPARC-206ENST00000524277 CCDC62Q6P9F0 684 aa13.81□□□□□ -0.2
SPARC-206ENST00000524277 OTOP2Q7RTS6 562 aa13.81□□□□□ -0.2
SPARC-206ENST00000524277 CCDC155Q8N6L0 562 aa13.81□□□□□ -0.2
SPARC-206ENST00000524277 EXOC6Q8TAG9 804 aa13.81□□□□□ -0.2
SPARC-206ENST00000524277 RUFY2Q8WXA3 655 aa13.81□□□□□ -0.2
SPARC-206ENST00000524277 RMDN3Q96TC7 470 aa13.81□□□□□ -0.2
SPARC-206ENST00000524277 AMNQ9BXJ7 453 aa13.81□□□□□ -0.2
SPARC-206ENST00000524277 TRMT13Q9NUP7 481 aaKnown RBP13.81□□□□□ -0.2
SPARC-206ENST00000524277 CXXC1Q9P0U4 656 aaPredicted RBP13.81□□□□□ -0.2
SPARC-206ENST00000524277 UMODL1Q5DID0 1318 aa13.81□□□□□ -0.2
SPARC-206ENST00000524277 LCTP09848 1927 aa13.8□□□□□ -0.2
SPARC-206ENST00000524277 CDH23Q9H251 3354 aa13.8□□□□□ -0.2
SPARC-206ENST00000524277 GRXCR1A8MXD5 290 aa13.8□□□□□ -0.2
SPARC-206ENST00000524277 EIF3JO75822 258 aaKnown RBP13.8□□□□□ -0.2
SPARC-206ENST00000524277 PARNO95453 639 aaKnown RBP13.8□□□□□ -0.2
SPARC-206ENST00000524277 CASTP20810 708 aaKnown RBP13.8□□□□□ -0.2
SPARC-206ENST00000524277 PTGS1P23219 599 aa13.8□□□□□ -0.2
SPARC-206ENST00000524277 PBX2P40425 430 aa13.8□□□□□ -0.2
SPARC-206ENST00000524277 QRICH1Q2TAL8 776 aa13.8□□□□□ -0.2
SPARC-206ENST00000524277 FAM47CQ5HY64 1035 aa13.8□□□□□ -0.2
SPARC-206ENST00000524277 ARHGEF16Q5VV41 709 aa13.8□□□□□ -0.2
SPARC-206ENST00000524277 KCNV1Q6PIU1 500 aa13.8□□□□□ -0.2
SPARC-206ENST00000524277 PHOSPHO2Q8TCD6 241 aa13.8□□□□□ -0.2
SPARC-206ENST00000524277 JMJD4Q9H9V9 463 aa13.8□□□□□ -0.2
SPARC-206ENST00000524277 PCDHA11Q9Y5I1 949 aa13.8□□□□□ -0.2
SPARC-206ENST00000524277 CYP2C9P11712 490 aa13.79□□□□□ -0.2
SPARC-206ENST00000524277 GHRHRQ02643 423 aa13.79□□□□□ -0.2
SPARC-206ENST00000524277 DGKDQ16760 1214 aa13.79□□□□□ -0.2
SPARC-206ENST00000524277 SESTD1Q86VW0 696 aa13.79□□□□□ -0.2
SPARC-206ENST00000524277 CAGE1Q8TC20 777 aa13.79□□□□□ -0.2
SPARC-206ENST00000524277 EMID1Q96A84 441 aaPredicted RBP13.79□□□□□ -0.2
SPARC-206ENST00000524277 SCLYQ96I15 445 aa13.79□□□□□ -0.2
SPARC-206ENST00000524277 TAAR1Q96RJ0 339 aa13.79□□□□□ -0.2
SPARC-206ENST00000524277 NOD1Q9Y239 953 aa13.79□□□□□ -0.2
SPARC-206ENST00000524277 U3KPZ7 1027 aaPredicted RBP13.79□□□□□ -0.2
SPARC-206ENST00000524277 MYO9BQ13459 2157 aa13.79□□□□□ -0.2
SPARC-206ENST00000524277 SCN10AQ9Y5Y9 1956 aa13.78□□□□□ -0.2
SPARC-206ENST00000524277 ERICH2A1L162 156 aa13.78□□□□□ -0.2
SPARC-206ENST00000524277 ZBBXA8MT70 800 aa13.78□□□□□ -0.2
SPARC-206ENST00000524277 ZBTB5O15062 677 aa13.78□□□□□ -0.2
SPARC-206ENST00000524277 NR3C2P08235 984 aa13.78□□□□□ -0.2
SPARC-206ENST00000524277 ATP2A2P16615 1042 aaKnown RBP13.78□□□□□ -0.2
SPARC-206ENST00000524277 LAMC2Q13753 1193 aa13.78□□□□□ -0.2
SPARC-206ENST00000524277 TJAP1Q5JTD0 557 aa13.78□□□□□ -0.2
SPARC-206ENST00000524277 SEPT14Q6ZU15 432 aa13.78□□□□□ -0.2
SPARC-206ENST00000524277 ATXN2LQ8WWM7 1075 aaKnown RBP13.78□□□□□ -0.2
SPARC-206ENST00000524277 TBC1D5Q92609 795 aa13.78□□□□□ -0.2
SPARC-206ENST00000524277 COPS5Q92905 334 aa13.78□□□□□ -0.2
SPARC-206ENST00000524277 MTMR8Q96EF0 704 aa13.78□□□□□ -0.2
SPARC-206ENST00000524277 YTHDC1Q96MU7 727 aaKnown RBP13.78□□□□□ -0.2
SPARC-206ENST00000524277 SLC9A7Q96T83 725 aa13.78□□□□□ -0.2
SPARC-206ENST00000524277 KATNAL1Q9BW62 490 aa13.78□□□□□ -0.2
SPARC-206ENST00000524277 NKX2-4Q9H2Z4 354 aa13.78□□□□□ -0.2
SPARC-206ENST00000524277 CPVLQ9H3G5 476 aa13.78□□□□□ -0.2
SPARC-206ENST00000524277 PRDM12Q9H4Q4 367 aa13.78□□□□□ -0.2
SPARC-206ENST00000524277 VAT1LQ9HCJ6 419 aa13.78□□□□□ -0.2
SPARC-206ENST00000524277 KIF28PB7ZC32 967 aa13.77□□□□□ -0.21
SPARC-206ENST00000524277 KLRF2D3W0D1 207 aa13.77□□□□□ -0.21
SPARC-206ENST00000524277 BAIAP3O94812 1187 aa13.77□□□□□ -0.21
SPARC-206ENST00000524277 ARIH2O95376 493 aa13.77□□□□□ -0.21
SPARC-206ENST00000524277 MMP3P08254 477 aa13.77□□□□□ -0.21
SPARC-206ENST00000524277 IQCF3P0C7M6 154 aa13.77□□□□□ -0.21
SPARC-206ENST00000524277 TGFB3P10600 412 aa13.77□□□□□ -0.21
SPARC-206ENST00000524277 HSD17B4P51659 736 aa13.77□□□□□ -0.21
SPARC-206ENST00000524277 ARHGAP1Q07960 439 aa13.77□□□□□ -0.21
SPARC-206ENST00000524277 SART3Q15020 963 aaKnown RBP13.77□□□□□ -0.21
SPARC-206ENST00000524277 SEC23AQ15436 765 aa13.77□□□□□ -0.21
SPARC-206ENST00000524277 LAMA4Q16363 1823 aa13.77□□□□□ -0.21
SPARC-206ENST00000524277 PTGISQ16647 500 aa13.77□□□□□ -0.21
SPARC-206ENST00000524277 LY6KQ17RY6 165 aa13.77□□□□□ -0.21
SPARC-206ENST00000524277 TMEM67Q5HYA8 995 aa13.77□□□□□ -0.21
SPARC-206ENST00000524277 TTC22Q5TAA0 569 aa13.77□□□□□ -0.21
SPARC-206ENST00000524277 AFAP1L1Q8TED9 768 aa13.77□□□□□ -0.21
SPARC-206ENST00000524277 PRUNE2Q8WUY3 3088 aa13.77□□□□□ -0.21
SPARC-206ENST00000524277 AFG1LQ8WV93 481 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms