RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 RCAN1P53805 252 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 ZNF543Q08ER8 600 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 TOB2Q14106 344 aaPredicted RBP9.74□□□□□ -0.85
VPS13B-210ENST00000521932 COG2Q14746 738 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 FAM83BQ5T0W9 1011 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 BTNL9Q6UXG8 535 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 LBX2Q6XYB7 198 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 Q6ZVU0 165 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 CATIPQ7Z7H3 387 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 TCEANC2Q96MN5 208 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 ASCC2Q9H1I8 757 aaPredicted RBP9.74□□□□□ -0.85
VPS13B-210ENST00000521932 TMPRSS4Q9NRS4 437 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 PDRG1Q9NUG6 133 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 RNF186Q9NXI6 227 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 SAGE1Q9NXZ1 904 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 NXF1Q9UBU9 619 aaKnown RBP9.74□□□□□ -0.85
VPS13B-210ENST00000521932 CDV3Q9UKY7 258 aaKnown RBP9.74□□□□□ -0.85
VPS13B-210ENST00000521932 BRPF3Q9ULD4 1205 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 ADAMTS5Q9UNA0 930 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 MYPNQ86TC9 1320 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 MYH4Q9Y623 1939 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 PALM3A6NDB9 673 aaPredicted RBP9.73□□□□□ -0.85
VPS13B-210ENST00000521932 TLR2O60603 784 aa9.73□□□□□ -0.85
VPS13B-210ENST00000521932 DDAH1O94760 285 aa9.73□□□□□ -0.85
VPS13B-210ENST00000521932 BMP2P12643 396 aa9.73□□□□□ -0.85
VPS13B-210ENST00000521932 FGD1P98174 961 aa9.73□□□□□ -0.85
VPS13B-210ENST00000521932 PPP2R5BQ15173 497 aa9.73□□□□□ -0.85
VPS13B-210ENST00000521932 ANKRD1Q15327 319 aa9.73□□□□□ -0.85
VPS13B-210ENST00000521932 GPATCH4Q5T3I0 446 aaKnown RBP9.73□□□□□ -0.85
VPS13B-210ENST00000521932 APOA5Q6Q788 366 aa9.73□□□□□ -0.85
VPS13B-210ENST00000521932 ZNF654Q8IZM8 581 aa9.73□□□□□ -0.85
VPS13B-210ENST00000521932 PRPF38AQ8NAV1 312 aaKnown RBP9.73□□□□□ -0.85
VPS13B-210ENST00000521932 CHURC1Q8WUH1 139 aa9.73□□□□□ -0.85
VPS13B-210ENST00000521932 BRF1Q92994 677 aa9.73□□□□□ -0.85
VPS13B-210ENST00000521932 NUP88Q99567 741 aaPredicted RBP9.73□□□□□ -0.85
VPS13B-210ENST00000521932 P2RX7Q99572 595 aaKnown RBP9.73□□□□□ -0.85
VPS13B-210ENST00000521932 MAD2L2Q9UI95 211 aa9.73□□□□□ -0.85
VPS13B-210ENST00000521932 FEM1BQ9UK73 627 aa9.73□□□□□ -0.85
VPS13B-210ENST00000521932 SLC12A7Q9Y666 1083 aa9.73□□□□□ -0.85
VPS13B-210ENST00000521932 ESPNB1AK53 854 aa9.72□□□□□ -0.85
VPS13B-210ENST00000521932 FLOT1O75955 427 aa9.72□□□□□ -0.85
VPS13B-210ENST00000521932 PARP1P09874 1014 aaKnown RBP9.72□□□□□ -0.85
VPS13B-210ENST00000521932 CYP2C8P10632 490 aa9.72□□□□□ -0.85
VPS13B-210ENST00000521932 SMARCA1P28370 1054 aa9.72□□□□□ -0.85
VPS13B-210ENST00000521932 GCLCP48506 637 aaPredicted RBP9.72□□□□□ -0.85
VPS13B-210ENST00000521932 STAT2P52630 851 aa9.72□□□□□ -0.85
VPS13B-210ENST00000521932 HERVK_113P62684 666 aa9.72□□□□□ -0.85
VPS13B-210ENST00000521932 IRX3P78415 501 aaPredicted RBP9.72□□□□□ -0.85
VPS13B-210ENST00000521932 RABEP1Q15276 862 aa9.72□□□□□ -0.85
VPS13B-210ENST00000521932 TAF1CQ15572 869 aaPredicted RBP9.72□□□□□ -0.85
VPS13B-210ENST00000521932 ASPRV1Q53RT3 343 aa9.72□□□□□ -0.85
VPS13B-210ENST00000521932 C17orf99Q6UX52 265 aa9.72□□□□□ -0.85
VPS13B-210ENST00000521932 SYNE3Q6ZMZ3 975 aa9.72□□□□□ -0.85
VPS13B-210ENST00000521932 NFXL1Q6ZNB6 911 aa9.72□□□□□ -0.85
VPS13B-210ENST00000521932 KCTD1Q719H9 257 aa9.72□□□□□ -0.85
VPS13B-210ENST00000521932 RASGRP2Q7LDG7 609 aa9.72□□□□□ -0.85
VPS13B-210ENST00000521932 FAM160B2Q86V87 743 aa9.72□□□□□ -0.85
VPS13B-210ENST00000521932 FANCBQ8NB91 859 aa9.72□□□□□ -0.85
VPS13B-210ENST00000521932 GTF3C2Q8WUA4 911 aaPredicted RBP9.72□□□□□ -0.85
VPS13B-210ENST00000521932 ZNF274Q96GC6 653 aaPredicted RBP9.72□□□□□ -0.85
VPS13B-210ENST00000521932 PARK7Q99497 189 aaKnown RBP9.72□□□□□ -0.85
VPS13B-210ENST00000521932 ZFYVE28Q9HCC9 887 aa9.72□□□□□ -0.85
VPS13B-210ENST00000521932 PPP1R9AQ9ULJ8 1098 aa9.72□□□□□ -0.85
VPS13B-210ENST00000521932 ADGRA2Q96PE1 1338 aa9.72□□□□□ -0.85
VPS13B-210ENST00000521932 KLF18A0A0U1RQI7 1052 aa9.71□□□□□ -0.86
VPS13B-210ENST00000521932 ZBBXA8MT70 800 aa9.71□□□□□ -0.86
VPS13B-210ENST00000521932 TMEM232C9JQI7 657 aa9.71□□□□□ -0.86
VPS13B-210ENST00000521932 ZBTB43O43298 467 aa9.71□□□□□ -0.86
VPS13B-210ENST00000521932 TRPA1O75762 1119 aa9.71□□□□□ -0.86
VPS13B-210ENST00000521932 PDIA3P30101 505 aaKnown RBP9.71□□□□□ -0.86
VPS13B-210ENST00000521932 KIF5BP33176 963 aa9.71□□□□□ -0.86
VPS13B-210ENST00000521932 AK2P54819 239 aa9.71□□□□□ -0.86
VPS13B-210ENST00000521932 RAB15P59190 212 aa9.71□□□□□ -0.86
VPS13B-210ENST00000521932 APOBRQ0VD83 1088 aa9.71□□□□□ -0.86
VPS13B-210ENST00000521932 CRHR2Q13324 411 aa9.71□□□□□ -0.86
VPS13B-210ENST00000521932 GRM4Q14833 912 aa9.71□□□□□ -0.86
VPS13B-210ENST00000521932 NOM1Q5C9Z4 860 aaKnown RBP9.71□□□□□ -0.86
VPS13B-210ENST00000521932 TTBK2Q6IQ55 1244 aa9.71□□□□□ -0.86
VPS13B-210ENST00000521932 STAG2Q8N3U4 1231 aa9.71□□□□□ -0.86
VPS13B-210ENST00000521932 MB21D1Q8N884 522 aa9.71□□□□□ -0.86
VPS13B-210ENST00000521932 SMCR8Q8TEV9 937 aaPredicted RBP9.71□□□□□ -0.86
VPS13B-210ENST00000521932 SLF1Q9BQI6 1058 aa9.71□□□□□ -0.86
VPS13B-210ENST00000521932 TANGO6Q9C0B7 1094 aa9.71□□□□□ -0.86
VPS13B-210ENST00000521932 PRM3Q9NNZ6 103 aa9.71□□□□□ -0.86
VPS13B-210ENST00000521932 FBXO28Q9NVF7 368 aa9.71□□□□□ -0.86
VPS13B-210ENST00000521932 PGPEP1Q9NXJ5 209 aa9.71□□□□□ -0.86
VPS13B-210ENST00000521932 RBPJLQ9UBG7 517 aa9.71□□□□□ -0.86
VPS13B-210ENST00000521932 DNMT3LQ9UJW3 386 aa9.71□□□□□ -0.86
VPS13B-210ENST00000521932 MTMR7Q9Y216 660 aa9.71□□□□□ -0.86
VPS13B-210ENST00000521932 KLRF2D3W0D1 207 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 VWA5AO00534 786 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 ATP2A1O14983 1001 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 TBC1D8O95759 1140 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 GOLGA8HP0CJ92 632 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 BCRP11274 1271 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 GNAQP50148 359 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 CCDC96Q2M329 555 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 NBPF20Q3BBV1 942 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 REPS2Q8NFH8 660 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 CTCFLQ8NI51 663 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms