RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 SYTL5Q8TDW5 730 aaPredicted RBP10.18□□□□□ -0.78
CSMD1-208ENST00000520561 TBC1D5Q92609 795 aa10.18□□□□□ -0.78
CSMD1-208ENST00000520561 A1CFQ9NQ94 594 aaKnown RBP10.18□□□□□ -0.78
CSMD1-208ENST00000520561 CYP39A1Q9NYL5 469 aa10.18□□□□□ -0.78
CSMD1-208ENST00000520561 RCOR1Q9UKL0 485 aa10.18□□□□□ -0.78
CSMD1-208ENST00000520561 MORC2Q9Y6X9 1032 aaPredicted RBP10.18□□□□□ -0.78
CSMD1-208ENST00000520561 FRMPD4Q14CM0 1322 aa10.17□□□□□ -0.78
CSMD1-208ENST00000520561 RPTORQ8N122 1335 aa10.17□□□□□ -0.78
CSMD1-208ENST00000520561 ADGRA2Q96PE1 1338 aa10.17□□□□□ -0.78
CSMD1-208ENST00000520561 POTEB2H3BUK9 544 aa10.17□□□□□ -0.78
CSMD1-208ENST00000520561 LAD1O00515 517 aa10.17□□□□□ -0.78
CSMD1-208ENST00000520561 ZNF76P36508 570 aa10.17□□□□□ -0.78
CSMD1-208ENST00000520561 TM4SF4P48230 202 aa10.17□□□□□ -0.78
CSMD1-208ENST00000520561 USP11P51784 963 aa10.17□□□□□ -0.78
CSMD1-208ENST00000520561 UBE2HP62256 183 aa10.17□□□□□ -0.78
CSMD1-208ENST00000520561 ATP2C1P98194 919 aaPredicted RBP10.17□□□□□ -0.78
CSMD1-208ENST00000520561 BAATQ14032 418 aaPredicted RBP10.17□□□□□ -0.78
CSMD1-208ENST00000520561 KCTD2Q14681 263 aa10.17□□□□□ -0.78
CSMD1-208ENST00000520561 PTPAQ15257 358 aa10.17□□□□□ -0.78
CSMD1-208ENST00000520561 ARHGEF16Q5VV41 709 aa10.17□□□□□ -0.78
CSMD1-208ENST00000520561 PPP4R3AQ6IN85 833 aa10.17□□□□□ -0.78
CSMD1-208ENST00000520561 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.17□□□□□ -0.78
CSMD1-208ENST00000520561 KRI1Q8N9T8 703 aaKnown RBP10.17□□□□□ -0.78
CSMD1-208ENST00000520561 RMDN3Q96TC7 470 aa10.17□□□□□ -0.78
CSMD1-208ENST00000520561 MMP19Q99542 508 aa10.17□□□□□ -0.78
CSMD1-208ENST00000520561 DDX25Q9UHL0 483 aaKnown RBP10.17□□□□□ -0.78
CSMD1-208ENST00000520561 IVNS1ABPQ9Y6Y0 642 aa10.17□□□□□ -0.78
CSMD1-208ENST00000520561 THSD7BQ9C0I4 1608 aa10.17□□□□□ -0.78
CSMD1-208ENST00000520561 SMCHD1A6NHR9 2005 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 MYH7BA7E2Y1 1941 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 TCHHQ07283 1943 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 WNT7AO00755 349 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 MARCH6O60337 910 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 TLR2O60603 784 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 AOC2O75106 756 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 TDP2O95551 362 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 MBD3O95983 291 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 CYP3A4P08684 503 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 OR52Z1P0C646 297 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 FCER1AP12319 257 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 EIF2AK2P19525 551 aaKnown RBP10.16□□□□□ -0.78
CSMD1-208ENST00000520561 MARCKSP29966 332 aaPredicted RBP10.16□□□□□ -0.78
CSMD1-208ENST00000520561 CCND2P30279 289 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 MAPK4P31152 587 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 SETQ01105 290 aaPredicted RBP10.16□□□□□ -0.78
CSMD1-208ENST00000520561 PTGDRQ13258 359 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 CALCRLQ16602 461 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 Q3C1V9 767 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 DNERQ8NFT8 737 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 FERMT2Q96AC1 680 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 TAAR1Q96RJ0 339 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 MPHOSPH6Q99547 160 aaKnown RBP10.16□□□□□ -0.78
CSMD1-208ENST00000520561 EFCC1Q9HA90 598 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 PXMP2Q9NR77 195 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 LMBRD1Q9NUN5 540 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 COL20A1Q9P218 1284 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 ADD3Q9UEY8 706 aaKnown RBP10.16□□□□□ -0.78
CSMD1-208ENST00000520561 CPA4Q9UI42 421 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 PLXNB2O15031 1838 aa10.16□□□□□ -0.78
CSMD1-208ENST00000520561 ZNF236Q9UL36 1845 aa10.15□□□□□ -0.78
CSMD1-208ENST00000520561 CYP3A7-CYP3A51PA0A087WV96 503 aa10.15□□□□□ -0.78
CSMD1-208ENST00000520561 B4DLN1 442 aa10.15□□□□□ -0.78
CSMD1-208ENST00000520561 CA12O43570 354 aa10.15□□□□□ -0.78
CSMD1-208ENST00000520561 SLC37A4O43826 429 aa10.15□□□□□ -0.78
CSMD1-208ENST00000520561 CUTAO60888 179 aa10.15□□□□□ -0.78
CSMD1-208ENST00000520561 BCRP11274 1271 aa10.15□□□□□ -0.78
CSMD1-208ENST00000520561 CYP3A7P24462 503 aa10.15□□□□□ -0.78
CSMD1-208ENST00000520561 CIITAP33076 1130 aa10.15□□□□□ -0.78
CSMD1-208ENST00000520561 PRPHP41219 470 aa10.15□□□□□ -0.78
CSMD1-208ENST00000520561 UBXN2AP68543 259 aa10.15□□□□□ -0.78
CSMD1-208ENST00000520561 CRHR2Q13324 411 aa10.15□□□□□ -0.78
CSMD1-208ENST00000520561 TMEM266Q2M3C6 531 aa10.15□□□□□ -0.78
CSMD1-208ENST00000520561 TPRNQ4KMQ1 711 aa10.15□□□□□ -0.78
CSMD1-208ENST00000520561 PRR16Q569H4 304 aa10.15□□□□□ -0.78
CSMD1-208ENST00000520561 PCNX4Q63HM2 1172 aa10.15□□□□□ -0.78
CSMD1-208ENST00000520561 ARL6IP4Q66PJ3 421 aaKnown RBP10.15□□□□□ -0.78
CSMD1-208ENST00000520561 XRRA1Q6P2D8 792 aa10.15□□□□□ -0.78
CSMD1-208ENST00000520561 POTEDQ86YR6 584 aa10.15□□□□□ -0.78
CSMD1-208ENST00000520561 NSUN6Q8TEA1 469 aaKnown RBP10.15□□□□□ -0.78
CSMD1-208ENST00000520561 CRYGNQ8WXF5 182 aa10.15□□□□□ -0.78
CSMD1-208ENST00000520561 ZIC5Q96T25 663 aa10.15□□□□□ -0.78
CSMD1-208ENST00000520561 PDCD2LQ9BRP1 358 aa10.15□□□□□ -0.78
CSMD1-208ENST00000520561 PORCNQ9H237 461 aa10.15□□□□□ -0.78
CSMD1-208ENST00000520561 PCDHA7Q9UN72 937 aa10.15□□□□□ -0.78
CSMD1-208ENST00000520561 A0A1W2PQ27 194 aa10.14□□□□□ -0.79
CSMD1-208ENST00000520561 A0A1W2PQ64 194 aa10.14□□□□□ -0.79
CSMD1-208ENST00000520561 A0A1W2PQD8 194 aa10.14□□□□□ -0.79
CSMD1-208ENST00000520561 GADD45BO75293 160 aaPredicted RBP10.14□□□□□ -0.79
CSMD1-208ENST00000520561 MYCLP12524 364 aaPredicted RBP10.14□□□□□ -0.79
CSMD1-208ENST00000520561 PTPREP23469 700 aa10.14□□□□□ -0.79
CSMD1-208ENST00000520561 MAP2K2P36507 400 aa10.14□□□□□ -0.79
CSMD1-208ENST00000520561 ALDH5A1P51649 535 aaPredicted RBP10.14□□□□□ -0.79
CSMD1-208ENST00000520561 PGM5Q15124 567 aa10.14□□□□□ -0.79
CSMD1-208ENST00000520561 SKOR2Q2VWA4 1001 aaPredicted RBP10.14□□□□□ -0.79
CSMD1-208ENST00000520561 Q4G0T1 1027 aa10.14□□□□□ -0.79
CSMD1-208ENST00000520561 ADALQ6DHV7 355 aa10.14□□□□□ -0.79
CSMD1-208ENST00000520561 DTHD1Q6ZMT9 781 aa10.14□□□□□ -0.79
CSMD1-208ENST00000520561 CCDC73Q6ZRK6 1079 aa10.14□□□□□ -0.79
CSMD1-208ENST00000520561 GPR142Q7Z601 462 aa10.14□□□□□ -0.79
CSMD1-208ENST00000520561 PLEKHH3Q7Z736 793 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms