RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 CDC42EP5Q6NZY7 148 aa9.24□□□□□ -0.93
CTHRC1-203ENST00000520337 Q6ZUG5 572 aa9.24□□□□□ -0.93
CTHRC1-203ENST00000520337 CHST3Q7LGC8 479 aa9.24□□□□□ -0.93
CTHRC1-203ENST00000520337 TEX11Q8IYF3 940 aa9.24□□□□□ -0.93
CTHRC1-203ENST00000520337 TEKT1Q969V4 418 aa9.24□□□□□ -0.93
CTHRC1-203ENST00000520337 ZSCAN31Q96LW9 406 aaPredicted RBP9.24□□□□□ -0.93
CTHRC1-203ENST00000520337 NACC1Q96RE7 527 aa9.24□□□□□ -0.93
CTHRC1-203ENST00000520337 SYT17Q9BSW7 474 aa9.24□□□□□ -0.93
CTHRC1-203ENST00000520337 LRRC2Q9BYS8 371 aa9.24□□□□□ -0.93
CTHRC1-203ENST00000520337 DNAJB12Q9NXW2 375 aaKnown RBP9.24□□□□□ -0.93
CTHRC1-203ENST00000520337 SERPINA10Q9UK55 444 aa9.24□□□□□ -0.93
CTHRC1-203ENST00000520337 PCDHAC2Q9Y5I4 1007 aa9.24□□□□□ -0.93
CTHRC1-203ENST00000520337 POLR2AP24928 1970 aaKnown RBP9.24□□□□□ -0.93
CTHRC1-203ENST00000520337 TCHHQ07283 1943 aa9.23□□□□□ -0.93
CTHRC1-203ENST00000520337 PRC1O43663 620 aa9.23□□□□□ -0.93
CTHRC1-203ENST00000520337 USP5P45974 858 aa9.23□□□□□ -0.93
CTHRC1-203ENST00000520337 EVCP57679 992 aa9.23□□□□□ -0.93
CTHRC1-203ENST00000520337 MFSD6Q6ZSS7 791 aa9.23□□□□□ -0.93
CTHRC1-203ENST00000520337 C8orf86Q6ZUL3 223 aa9.23□□□□□ -0.93
CTHRC1-203ENST00000520337 MAPKAPK5Q8IW41 473 aa9.23□□□□□ -0.93
CTHRC1-203ENST00000520337 IGDCC4Q8TDY8 1250 aa9.23□□□□□ -0.93
CTHRC1-203ENST00000520337 INTS4Q96HW7 963 aaKnown RBP9.23□□□□□ -0.93
CTHRC1-203ENST00000520337 SLKQ9H2G2 1235 aaPredicted RBP9.23□□□□□ -0.93
CTHRC1-203ENST00000520337 IGFLR1Q9H665 355 aa9.23□□□□□ -0.93
CTHRC1-203ENST00000520337 CNNM2Q9H8M5 875 aa9.23□□□□□ -0.93
CTHRC1-203ENST00000520337 USP40Q9NVE5 1235 aa9.23□□□□□ -0.93
CTHRC1-203ENST00000520337 MCM9Q9NXL9 1143 aa9.23□□□□□ -0.93
CTHRC1-203ENST00000520337 ZSWIM5Q9P217 1185 aa9.23□□□□□ -0.93
CTHRC1-203ENST00000520337 ARPP21Q9UBL0 812 aaPredicted RBP9.23□□□□□ -0.93
CTHRC1-203ENST00000520337 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.23□□□□□ -0.93
CTHRC1-203ENST00000520337 FLT1P17948 1338 aa9.23□□□□□ -0.93
CTHRC1-203ENST00000520337 MYO3BQ8WXR4 1341 aa9.23□□□□□ -0.93
CTHRC1-203ENST00000520337 FZD9O00144 591 aa9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 ORC4O43929 436 aa9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 ATG7O95352 703 aa9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 PCP11498 1178 aaKnown RBP9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 GRNP28799 593 aaKnown RBP9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 GATA4P43694 442 aa9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 PLCD1P51178 756 aa9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 TRDNQ13061 729 aa9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 CIAPIN1Q6FI81 312 aa9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 RALYLQ86SE5 291 aaKnown RBP9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 STK11IPQ8N1F8 1099 aa9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 NECAB1Q8N987 351 aa9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 AGBL3Q8NEM8 1001 aa9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 JDP2Q8WYK2 163 aa9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 BRF1Q92994 677 aa9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 COL26A1Q96A83 441 aa9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 PRMT6Q96LA8 375 aaPredicted RBP9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 ARID3AQ99856 593 aa9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 KRT23Q9C075 422 aa9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 RNF41Q9H4P4 317 aaPredicted RBP9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 DDX4Q9NQI0 724 aaKnown RBP9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 SH2B1Q9NRF2 756 aaPredicted RBP9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 SAP30BPQ9UHR5 308 aaKnown RBP9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 BRPF3Q9ULD4 1205 aa9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 ZMIZ1Q9ULJ6 1067 aa9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 MYH6P13533 1939 aa9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 ROBO3Q96MS0 1386 aa9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 GOLGB1Q14789 3259 aaKnown RBP9.22□□□□□ -0.93
CTHRC1-203ENST00000520337 SH2B2O14492 632 aaPredicted RBP9.21□□□□□ -0.94
CTHRC1-203ENST00000520337 HSP90AA1P07900 732 aaKnown RBP9.21□□□□□ -0.94
CTHRC1-203ENST00000520337 YBX3P16989 372 aaKnown RBP eCLIP9.21□□□□□ -0.94
CTHRC1-203ENST00000520337 APOBRQ0VD83 1088 aa9.21□□□□□ -0.94
CTHRC1-203ENST00000520337 NFIAQ12857 509 aa9.21□□□□□ -0.94
CTHRC1-203ENST00000520337 CFAP100Q494V2 611 aa9.21□□□□□ -0.94
CTHRC1-203ENST00000520337 RRP12Q5JTH9 1297 aaKnown RBP9.21□□□□□ -0.94
CTHRC1-203ENST00000520337 ARHGAP27Q6ZUM4 889 aa9.21□□□□□ -0.94
CTHRC1-203ENST00000520337 ZFPM1Q8IX07 1006 aa9.21□□□□□ -0.94
CTHRC1-203ENST00000520337 DYNLL2Q96FJ2 89 aa9.21□□□□□ -0.94
CTHRC1-203ENST00000520337 IFT43Q96FT9 208 aa9.21□□□□□ -0.94
CTHRC1-203ENST00000520337 ZBED3Q96IU2 234 aaPredicted RBP9.21□□□□□ -0.94
CTHRC1-203ENST00000520337 JPH1Q9HDC5 661 aaPredicted RBP9.21□□□□□ -0.94
CTHRC1-203ENST00000520337 SHTN1A0MZ66 631 aa9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 PFKFB2O60825 505 aa9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 EGFRP00533 1210 aa9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 POLR3DP05423 398 aaPredicted RBP9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 SLC3A2P08195 630 aaKnown RBP9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 FURINP09958 794 aa9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 PDIA3P30101 505 aaKnown RBP9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 TNIP1Q15025 636 aa9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 OCLNQ16625 522 aa9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 SLC4A8Q2Y0W8 1093 aa9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 PSAPL1Q6NUJ1 521 aa9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 CCDC83Q8IWF9 413 aa9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 ESR2Q92731 530 aa9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 CCDC97Q96F63 343 aaPredicted RBP9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 ZNF274Q96GC6 653 aaPredicted RBP9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 TMEM87BQ96K49 555 aa9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 MTA3Q9BTC8 594 aa9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 IDI2Q9BXS1 227 aa9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 OSBPL5Q9H0X9 879 aaPredicted RBP9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 LY9Q9HBG7 655 aa9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 CWC22Q9HCG8 908 aaKnown RBP9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 CHMP5Q9NZZ3 219 aa9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 FRRS1LQ9P0K9 344 aa9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 LRFN2Q9ULH4 789 aa9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 ANGEL1Q9UNK9 670 aaKnown RBP9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 GREB1LQ9C091 1923 aaPredicted RBP9.2□□□□□ -0.94
CTHRC1-203ENST00000520337 BAZ2BQ9UIF8 2168 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms