RNA–Protein interactions for RNA: ENST00000515658.1

COL4A5-210, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-210ENST00000515658 TCEANC2Q96MN5 208 aa11.56□□□□□ -0.56
COL4A5-210ENST00000515658 UBAC1Q9BSL1 405 aa11.56□□□□□ -0.56
COL4A5-210ENST00000515658 PHF24Q9UPV7 400 aa11.56□□□□□ -0.56
COL4A5-210ENST00000515658 NR2E3Q9Y5X4 410 aa11.56□□□□□ -0.56
COL4A5-210ENST00000515658 TRIM43BA6NCK2 446 aa11.55□□□□□ -0.56
COL4A5-210ENST00000515658 GRXCR2A6NFK2 248 aa11.55□□□□□ -0.56
COL4A5-210ENST00000515658 IFIT3O14879 490 aaKnown RBP11.55□□□□□ -0.56
COL4A5-210ENST00000515658 PARP1P09874 1014 aaKnown RBP11.55□□□□□ -0.56
COL4A5-210ENST00000515658 FDX1P10109 184 aa11.55□□□□□ -0.56
COL4A5-210ENST00000515658 RXRAP19793 462 aa11.55□□□□□ -0.56
COL4A5-210ENST00000515658 ALDH5A1P51649 535 aaPredicted RBP11.55□□□□□ -0.56
COL4A5-210ENST00000515658 RPS6P62753 249 aaKnown RBP11.55□□□□□ -0.56
COL4A5-210ENST00000515658 SNX17Q15036 470 aa11.55□□□□□ -0.56
COL4A5-210ENST00000515658 NECTIN1Q15223 517 aa11.55□□□□□ -0.56
COL4A5-210ENST00000515658 KCNA10Q16322 511 aa11.55□□□□□ -0.56
COL4A5-210ENST00000515658 BMP2KLQ5H9B9 411 aa11.55□□□□□ -0.56
COL4A5-210ENST00000515658 CREB3L3Q68CJ9 461 aa11.55□□□□□ -0.56
COL4A5-210ENST00000515658 SMYD5Q6GMV2 418 aa11.55□□□□□ -0.56
COL4A5-210ENST00000515658 CMTR1Q8N1G2 835 aaKnown RBP11.55□□□□□ -0.56
COL4A5-210ENST00000515658 PIBF1Q8WXW3 757 aa11.55□□□□□ -0.56
COL4A5-210ENST00000515658 COPS5Q92905 334 aa11.55□□□□□ -0.56
COL4A5-210ENST00000515658 TRIM43Q96BQ3 446 aaPredicted RBP11.55□□□□□ -0.56
COL4A5-210ENST00000515658 LRCH3Q96II8 777 aa11.55□□□□□ -0.56
COL4A5-210ENST00000515658 CNNM2Q9H8M5 875 aa11.55□□□□□ -0.56
COL4A5-210ENST00000515658 LY9Q9HBG7 655 aa11.55□□□□□ -0.56
COL4A5-210ENST00000515658 ANO2Q9NQ90 1003 aa11.55□□□□□ -0.56
COL4A5-210ENST00000515658 NRBP1Q9UHY1 535 aa11.55□□□□□ -0.56
COL4A5-210ENST00000515658 FAM184BQ9ULE4 1060 aa11.55□□□□□ -0.56
COL4A5-210ENST00000515658 PALM3A6NDB9 673 aaPredicted RBP11.54□□□□□ -0.56
COL4A5-210ENST00000515658 KBTBD13C9JR72 458 aa11.54□□□□□ -0.56
COL4A5-210ENST00000515658 KLRF2D3W0D1 207 aa11.54□□□□□ -0.56
COL4A5-210ENST00000515658 ARIH2O95376 493 aa11.54□□□□□ -0.56
COL4A5-210ENST00000515658 CPA1P15085 419 aa11.54□□□□□ -0.56
COL4A5-210ENST00000515658 ACLYP53396 1101 aa11.54□□□□□ -0.56
COL4A5-210ENST00000515658 TLE2Q04725 743 aa11.54□□□□□ -0.56
COL4A5-210ENST00000515658 TROAPQ12815 778 aa11.54□□□□□ -0.56
COL4A5-210ENST00000515658 GRM4Q14833 912 aa11.54□□□□□ -0.56
COL4A5-210ENST00000515658 ADCK5Q3MIX3 580 aa11.54□□□□□ -0.56
COL4A5-210ENST00000515658 ASPRV1Q53RT3 343 aa11.54□□□□□ -0.56
COL4A5-210ENST00000515658 TMEM67Q5HYA8 995 aa11.54□□□□□ -0.56
COL4A5-210ENST00000515658 GPATCH4Q5T3I0 446 aaKnown RBP11.54□□□□□ -0.56
COL4A5-210ENST00000515658 MSL3Q8N5Y2 521 aaKnown RBP11.54□□□□□ -0.56
COL4A5-210ENST00000515658 ARRDC4Q8NCT1 418 aa11.54□□□□□ -0.56
COL4A5-210ENST00000515658 MORC4Q8TE76 937 aa11.54□□□□□ -0.56
COL4A5-210ENST00000515658 MTMR8Q96EF0 704 aa11.54□□□□□ -0.56
COL4A5-210ENST00000515658 CCDC136Q96JN2 1154 aa11.54□□□□□ -0.56
COL4A5-210ENST00000515658 TAAR1Q96RJ0 339 aa11.54□□□□□ -0.56
COL4A5-210ENST00000515658 PIGSQ96S52 555 aa11.54□□□□□ -0.56
COL4A5-210ENST00000515658 KRTAP3-3Q9BYR6 98 aa11.54□□□□□ -0.56
COL4A5-210ENST00000515658 KRTAP3-2Q9BYR7 98 aa11.54□□□□□ -0.56
COL4A5-210ENST00000515658 UPF3AQ9H1J1 476 aaKnown RBP11.54□□□□□ -0.56
COL4A5-210ENST00000515658 ABHD16BQ9H3Z7 469 aa11.54□□□□□ -0.56
COL4A5-210ENST00000515658 PDLIM7Q9NR12 457 aa11.54□□□□□ -0.56
COL4A5-210ENST00000515658 GNEQ9Y223 722 aaKnown RBP11.54□□□□□ -0.56
COL4A5-210ENST00000515658 WDR19Q8NEZ3 1342 aa11.54□□□□□ -0.56
COL4A5-210ENST00000515658 BAZ2BQ9UIF8 2168 aaKnown RBP11.53□□□□□ -0.56
COL4A5-210ENST00000515658 hCG_1642624A0A1W2PR95 340 aa11.53□□□□□ -0.56
COL4A5-210ENST00000515658 PRC1O43663 620 aa11.53□□□□□ -0.56
COL4A5-210ENST00000515658 DUSP11O75319 330 aaKnown RBP11.53□□□□□ -0.56
COL4A5-210ENST00000515658 PLEKHA8P1O95397 391 aa11.53□□□□□ -0.56
COL4A5-210ENST00000515658 C6orf222P0C671 652 aaPredicted RBP11.53□□□□□ -0.56
COL4A5-210ENST00000515658 EPHB4P54760 987 aa11.53□□□□□ -0.56
COL4A5-210ENST00000515658 RNF207Q6ZRF8 634 aa11.53□□□□□ -0.56
COL4A5-210ENST00000515658 HOMER1Q86YM7 354 aa11.53□□□□□ -0.56
COL4A5-210ENST00000515658 NCOA7Q8NI08 942 aa11.53□□□□□ -0.56
COL4A5-210ENST00000515658 SYTL5Q8TDW5 730 aaPredicted RBP11.53□□□□□ -0.56
COL4A5-210ENST00000515658 PRDM5Q9NQX1 630 aaPredicted RBP11.53□□□□□ -0.56
COL4A5-210ENST00000515658 GRIN2DO15399 1336 aa11.53□□□□□ -0.56
COL4A5-210ENST00000515658 LAMA2P24043 3122 aaKnown RBP11.53□□□□□ -0.56
COL4A5-210ENST00000515658 SH2B2O14492 632 aaPredicted RBP11.52□□□□□ -0.57
COL4A5-210ENST00000515658 DYNC1LI2O43237 492 aaPredicted RBP11.52□□□□□ -0.57
COL4A5-210ENST00000515658 DHX16O60231 1041 aaKnown RBP11.52□□□□□ -0.57
COL4A5-210ENST00000515658 PQBP1O60828 265 aaKnown RBP11.52□□□□□ -0.57
COL4A5-210ENST00000515658 ASGR1P07306 291 aa11.52□□□□□ -0.57
COL4A5-210ENST00000515658 CAPN2P17655 700 aa11.52□□□□□ -0.57
COL4A5-210ENST00000515658 EDNRBP24530 442 aa11.52□□□□□ -0.57
COL4A5-210ENST00000515658 HOXA13P31271 388 aaPredicted RBP11.52□□□□□ -0.57
COL4A5-210ENST00000515658 MLLT3P42568 568 aaPredicted RBP11.52□□□□□ -0.57
COL4A5-210ENST00000515658 GJA9P57773 515 aa11.52□□□□□ -0.57
COL4A5-210ENST00000515658 PSMC6P62333 389 aa11.52□□□□□ -0.57
COL4A5-210ENST00000515658 TNFAIP2Q03169 654 aa11.52□□□□□ -0.57
COL4A5-210ENST00000515658 WTAPQ15007 396 aa11.52□□□□□ -0.57
COL4A5-210ENST00000515658 CXCL17Q6UXB2 119 aa11.52□□□□□ -0.57
COL4A5-210ENST00000515658 RALYLQ86SE5 291 aaKnown RBP11.52□□□□□ -0.57
COL4A5-210ENST00000515658 IL31RAQ8NI17 732 aa11.52□□□□□ -0.57
COL4A5-210ENST00000515658 ASB14A6NK59 587 aa11.51□□□□□ -0.57
COL4A5-210ENST00000515658 ARHGAP33O14559 1287 aa11.51□□□□□ -0.57
COL4A5-210ENST00000515658 FAAP100Q0VG06 881 aa11.51□□□□□ -0.57
COL4A5-210ENST00000515658 TRDNQ13061 729 aa11.51□□□□□ -0.57
COL4A5-210ENST00000515658 CCDC178Q5BJE1 867 aa11.51□□□□□ -0.57
COL4A5-210ENST00000515658 GNASQ5JWF2 1037 aa11.51□□□□□ -0.57
COL4A5-210ENST00000515658 C9orf50Q5SZB4 431 aa11.51□□□□□ -0.57
COL4A5-210ENST00000515658 KIAA1211Q6ZU35 1233 aa11.51□□□□□ -0.57
COL4A5-210ENST00000515658 NOL8Q76FK4 1167 aaKnown RBP11.51□□□□□ -0.57
COL4A5-210ENST00000515658 RNF180Q86T96 592 aa11.51□□□□□ -0.57
COL4A5-210ENST00000515658 TLK2Q86UE8 772 aa11.51□□□□□ -0.57
COL4A5-210ENST00000515658 FBXO11Q86XK2 927 aa11.51□□□□□ -0.57
COL4A5-210ENST00000515658 ZNF654Q8IZM8 581 aa11.51□□□□□ -0.57
COL4A5-210ENST00000515658 NUP133Q8WUM0 1156 aa11.51□□□□□ -0.57
COL4A5-210ENST00000515658 GPKOWQ92917 476 aaPredicted RBP eCLIP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms