RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 RPS6P62753 249 aaKnown RBP11.37□□□□□ -0.59
TCOF1-212ENST00000513538 GPNMBQ14956 572 aa11.37□□□□□ -0.59
TCOF1-212ENST00000513538 PPP2R5BQ15173 497 aa11.37□□□□□ -0.59
TCOF1-212ENST00000513538 PWP2Q15269 919 aaKnown RBP11.37□□□□□ -0.59
TCOF1-212ENST00000513538 ALX1Q15699 326 aa11.37□□□□□ -0.59
TCOF1-212ENST00000513538 TMEM67Q5HYA8 995 aa11.37□□□□□ -0.59
TCOF1-212ENST00000513538 RRP12Q5JTH9 1297 aaKnown RBP11.37□□□□□ -0.59
TCOF1-212ENST00000513538 RNF207Q6ZRF8 634 aa11.37□□□□□ -0.59
TCOF1-212ENST00000513538 FAM227BQ96M60 508 aa11.37□□□□□ -0.59
TCOF1-212ENST00000513538 CPVLQ9H3G5 476 aa11.37□□□□□ -0.59
TCOF1-212ENST00000513538 TRANK1O15050 2925 aa11.37□□□□□ -0.59
TCOF1-212ENST00000513538 BDP1A6H8Y1 2624 aa11.36□□□□□ -0.59
TCOF1-212ENST00000513538 LPXNO60711 386 aa11.36□□□□□ -0.59
TCOF1-212ENST00000513538 FGAP02671 866 aa11.36□□□□□ -0.59
TCOF1-212ENST00000513538 SNHG28P0DPA3 235 aa11.36□□□□□ -0.59
TCOF1-212ENST00000513538 HAND2P61296 217 aa11.36□□□□□ -0.59
TCOF1-212ENST00000513538 PDE4DQ08499 809 aa11.36□□□□□ -0.59
TCOF1-212ENST00000513538 ZNF543Q08ER8 600 aa11.36□□□□□ -0.59
TCOF1-212ENST00000513538 TCTN1Q2MV58 587 aa11.36□□□□□ -0.59
TCOF1-212ENST00000513538 NFRKBQ6P4R8 1299 aa11.36□□□□□ -0.59
TCOF1-212ENST00000513538 TMCO2Q7Z6W1 182 aaPredicted RBP11.36□□□□□ -0.59
TCOF1-212ENST00000513538 ZNF589Q86UQ0 364 aaPredicted RBP11.36□□□□□ -0.59
TCOF1-212ENST00000513538 TBC1D10CQ8IV04 446 aa11.36□□□□□ -0.59
TCOF1-212ENST00000513538 HERC6Q8IVU3 1022 aa11.36□□□□□ -0.59
TCOF1-212ENST00000513538 SCFD2Q8WU76 684 aa11.36□□□□□ -0.59
TCOF1-212ENST00000513538 SLC9A7Q96T83 725 aa11.36□□□□□ -0.59
TCOF1-212ENST00000513538 TCP11L1Q9NUJ3 509 aa11.36□□□□□ -0.59
TCOF1-212ENST00000513538 U3KPZ7 1027 aaPredicted RBP11.36□□□□□ -0.59
TCOF1-212ENST00000513538 WDR19Q8NEZ3 1342 aa11.35□□□□□ -0.59
TCOF1-212ENST00000513538 SIP14410 1827 aa11.35□□□□□ -0.59
TCOF1-212ENST00000513538 LCHNA4D1U4 455 aa11.35□□□□□ -0.59
TCOF1-212ENST00000513538 PITPNM1O00562 1244 aa11.35□□□□□ -0.59
TCOF1-212ENST00000513538 RFC2P35250 354 aa11.35□□□□□ -0.59
TCOF1-212ENST00000513538 SKIV2LQ15477 1246 aaKnown RBP11.35□□□□□ -0.59
TCOF1-212ENST00000513538 CCDC62Q6P9F0 684 aa11.35□□□□□ -0.59
TCOF1-212ENST00000513538 IL27Q8NEV9 243 aa11.35□□□□□ -0.59
TCOF1-212ENST00000513538 ARNTL2Q8WYA1 636 aa11.35□□□□□ -0.59
TCOF1-212ENST00000513538 TBC1D5Q92609 795 aa11.35□□□□□ -0.59
TCOF1-212ENST00000513538 DHX38Q92620 1227 aaKnown RBP11.35□□□□□ -0.59
TCOF1-212ENST00000513538 KAT2BQ92831 832 aa11.35□□□□□ -0.59
TCOF1-212ENST00000513538 EVI5LQ96CN4 794 aa11.35□□□□□ -0.59
TCOF1-212ENST00000513538 EPHX3Q9H6B9 360 aa11.35□□□□□ -0.59
TCOF1-212ENST00000513538 HELLSQ9NRZ9 838 aa11.35□□□□□ -0.59
TCOF1-212ENST00000513538 TOMM22Q9NS69 142 aa11.35□□□□□ -0.59
TCOF1-212ENST00000513538 COL20A1Q9P218 1284 aa11.35□□□□□ -0.59
TCOF1-212ENST00000513538 XIRP2A4UGR9 3374 aa11.35□□□□□ -0.59
TCOF1-212ENST00000513538 MYH7BA7E2Y1 1941 aa11.35□□□□□ -0.59
TCOF1-212ENST00000513538 ZMYM6O95789 1325 aa11.35□□□□□ -0.59
TCOF1-212ENST00000513538 NEDD4P46934 1319 aa11.35□□□□□ -0.59
TCOF1-212ENST00000513538 NKRFO15226 690 aaKnown RBP eCLIP11.34□□□□□ -0.59
TCOF1-212ENST00000513538 GOLGA8HP0CJ92 632 aa11.34□□□□□ -0.59
TCOF1-212ENST00000513538 TXNP10599 105 aaKnown RBP11.34□□□□□ -0.59
TCOF1-212ENST00000513538 HSPD1P10809 573 aaKnown RBP11.34□□□□□ -0.59
TCOF1-212ENST00000513538 PTPN11Q06124 597 aaPredicted RBP11.34□□□□□ -0.59
TCOF1-212ENST00000513538 ARHGAP1Q07960 439 aa11.34□□□□□ -0.59
TCOF1-212ENST00000513538 GRB10Q13322 594 aa11.34□□□□□ -0.59
TCOF1-212ENST00000513538 USH1GQ495M9 461 aa11.34□□□□□ -0.59
TCOF1-212ENST00000513538 GDF6Q6KF10 455 aaPredicted RBP11.34□□□□□ -0.59
TCOF1-212ENST00000513538 DNERQ8NFT8 737 aa11.34□□□□□ -0.59
TCOF1-212ENST00000513538 PHOSPHO2Q8TCD6 241 aa11.34□□□□□ -0.59
TCOF1-212ENST00000513538 FTOQ9C0B1 505 aaKnown RBP eCLIP11.34□□□□□ -0.59
TCOF1-212ENST00000513538 TSPYL2Q9H2G4 693 aaPredicted RBP11.34□□□□□ -0.59
TCOF1-212ENST00000513538 GPHNQ9NQX3 736 aaPredicted RBP11.34□□□□□ -0.59
TCOF1-212ENST00000513538 RAD50Q92878 1312 aa11.34□□□□□ -0.59
TCOF1-212ENST00000513538 TLL1O43897 1013 aa11.33□□□□□ -0.6
TCOF1-212ENST00000513538 KPNA6O60684 536 aa11.33□□□□□ -0.6
TCOF1-212ENST00000513538 MMP3P08254 477 aa11.33□□□□□ -0.6
TCOF1-212ENST00000513538 ACTN1P12814 892 aa11.33□□□□□ -0.6
TCOF1-212ENST00000513538 PLA2G5P39877 138 aa11.33□□□□□ -0.6
TCOF1-212ENST00000513538 PDE1AP54750 535 aa11.33□□□□□ -0.6
TCOF1-212ENST00000513538 CHMP4BP1P59074 171 aa11.33□□□□□ -0.6
TCOF1-212ENST00000513538 WDR5P61964 334 aaKnown RBP11.33□□□□□ -0.6
TCOF1-212ENST00000513538 DEFB103AP81534 67 aa11.33□□□□□ -0.6
TCOF1-212ENST00000513538 NMIQ13287 307 aaPredicted RBP11.33□□□□□ -0.6
TCOF1-212ENST00000513538 PTGISQ16647 500 aa11.33□□□□□ -0.6
TCOF1-212ENST00000513538 RETREG2Q8NC44 543 aa11.33□□□□□ -0.6
TCOF1-212ENST00000513538 SYTL5Q8TDW5 730 aaPredicted RBP11.33□□□□□ -0.6
TCOF1-212ENST00000513538 AFG1LQ8WV93 481 aa11.33□□□□□ -0.6
TCOF1-212ENST00000513538 KHSRPQ92945 711 aaKnown RBP eCLIP11.33□□□□□ -0.6
TCOF1-212ENST00000513538 ZKSCAN3Q9BRR0 538 aa11.33□□□□□ -0.6
TCOF1-212ENST00000513538 MICAL3Q7RTP6 2002 aa11.33□□□□□ -0.6
TCOF1-212ENST00000513538 GTPBP6O43824 516 aaPredicted RBP11.32□□□□□ -0.6
TCOF1-212ENST00000513538 NBNO60934 754 aa11.32□□□□□ -0.6
TCOF1-212ENST00000513538 BAIAP3O94812 1187 aa11.32□□□□□ -0.6
TCOF1-212ENST00000513538 BFSP2Q13515 415 aa11.32□□□□□ -0.6
TCOF1-212ENST00000513538 CDC37Q16543 378 aaPredicted RBP11.32□□□□□ -0.6
TCOF1-212ENST00000513538 LY6KQ17RY6 165 aa11.32□□□□□ -0.6
TCOF1-212ENST00000513538 AAK1Q2M2I8 961 aa11.32□□□□□ -0.6
TCOF1-212ENST00000513538 MCMDC2Q4G0Z9 681 aa11.32□□□□□ -0.6
TCOF1-212ENST00000513538 BRDTQ58F21 947 aaPredicted RBP11.32□□□□□ -0.6
TCOF1-212ENST00000513538 ANKRD45Q5TZF3 282 aa11.32□□□□□ -0.6
TCOF1-212ENST00000513538 TRAF7Q6Q0C0 670 aa11.32□□□□□ -0.6
TCOF1-212ENST00000513538 SEPT14Q6ZU15 432 aa11.32□□□□□ -0.6
TCOF1-212ENST00000513538 SESTD1Q86VW0 696 aa11.32□□□□□ -0.6
TCOF1-212ENST00000513538 AFAP1L1Q8TED9 768 aa11.32□□□□□ -0.6
TCOF1-212ENST00000513538 GDPD5Q8WTR4 605 aa11.32□□□□□ -0.6
TCOF1-212ENST00000513538 WNT8BQ93098 351 aa11.32□□□□□ -0.6
TCOF1-212ENST00000513538 TTC14Q96N46 770 aa11.32□□□□□ -0.6
TCOF1-212ENST00000513538 TAAR1Q96RJ0 339 aa11.32□□□□□ -0.6
TCOF1-212ENST00000513538 UBA5Q9GZZ9 404 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms