RNA–Protein interactions for RNA: ENST00000512901.6

LINC01550-203, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 2,192 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-203ENST00000512901 TMEM87AQ8NBN3 555 aa11.9□□□□□ -0.5
LINC01550-203ENST00000512901 SHCBP1Q8NEM2 672 aa11.9□□□□□ -0.5
LINC01550-203ENST00000512901 MAF1Q9H063 256 aa11.9□□□□□ -0.5
LINC01550-203ENST00000512901 MROH8Q9H579 483 aa11.9□□□□□ -0.5
LINC01550-203ENST00000512901 ZFYVE28Q9HCC9 887 aa11.9□□□□□ -0.5
LINC01550-203ENST00000512901 CYP39A1Q9NYL5 469 aa11.9□□□□□ -0.5
LINC01550-203ENST00000512901 MORF4L1Q9UBU8 362 aa11.9□□□□□ -0.5
LINC01550-203ENST00000512901 PFASO15067 1338 aa11.9□□□□□ -0.5
LINC01550-203ENST00000512901 MARCKSP29966 332 aaPredicted RBP11.89□□□□□ -0.51
LINC01550-203ENST00000512901 ZNF76P36508 570 aa11.89□□□□□ -0.51
LINC01550-203ENST00000512901 USP11P51784 963 aa11.89□□□□□ -0.51
LINC01550-203ENST00000512901 UBXN2AP68543 259 aa11.89□□□□□ -0.51
LINC01550-203ENST00000512901 KCTD2Q14681 263 aa11.89□□□□□ -0.51
LINC01550-203ENST00000512901 PTPAQ15257 358 aa11.89□□□□□ -0.51
LINC01550-203ENST00000512901 FAM110CQ1W6H9 321 aa11.89□□□□□ -0.51
LINC01550-203ENST00000512901 REM2Q8IYK8 340 aaPredicted RBP11.89□□□□□ -0.51
LINC01550-203ENST00000512901 COL20A1Q9P218 1284 aa11.89□□□□□ -0.51
LINC01550-203ENST00000512901 CPA4Q9UI42 421 aa11.89□□□□□ -0.51
LINC01550-203ENST00000512901 NEMFO60524 1076 aa11.89□□□□□ -0.51
LINC01550-203ENST00000512901 TDP2O95551 362 aa11.89□□□□□ -0.51
LINC01550-203ENST00000512901 ALDH1A1P00352 501 aa11.89□□□□□ -0.51
LINC01550-203ENST00000512901 GCFC2P16383 781 aaKnown RBP11.89□□□□□ -0.51
LINC01550-203ENST00000512901 PTGDRQ13258 359 aa11.89□□□□□ -0.51
LINC01550-203ENST00000512901 ORC2Q13416 577 aaPredicted RBP11.89□□□□□ -0.51
LINC01550-203ENST00000512901 TAAR1Q96RJ0 339 aa11.89□□□□□ -0.51
LINC01550-203ENST00000512901 RMDN3Q96TC7 470 aa11.89□□□□□ -0.51
LINC01550-203ENST00000512901 MMP19Q99542 508 aa11.89□□□□□ -0.51
LINC01550-203ENST00000512901 PORCNQ9H237 461 aa11.89□□□□□ -0.51
LINC01550-203ENST00000512901 EFCC1Q9HA90 598 aa11.89□□□□□ -0.51
LINC01550-203ENST00000512901 LMBRD1Q9NUN5 540 aa11.89□□□□□ -0.51
LINC01550-203ENST00000512901 PPP6R2O75170 966 aa11.88□□□□□ -0.51
LINC01550-203ENST00000512901 FCER1AP12319 257 aa11.88□□□□□ -0.51
LINC01550-203ENST00000512901 EIF2AK2P19525 551 aaKnown RBP11.88□□□□□ -0.51
LINC01550-203ENST00000512901 ARHGEF16Q5VV41 709 aa11.88□□□□□ -0.51
LINC01550-203ENST00000512901 POTEB2H3BUK9 544 aa11.88□□□□□ -0.51
LINC01550-203ENST00000512901 MARCH6O60337 910 aa11.88□□□□□ -0.51
LINC01550-203ENST00000512901 TLR2O60603 784 aa11.88□□□□□ -0.51
LINC01550-203ENST00000512901 HTRA3P83110 453 aa11.88□□□□□ -0.51
LINC01550-203ENST00000512901 ATP2C1P98194 919 aaPredicted RBP11.88□□□□□ -0.51
LINC01550-203ENST00000512901 CRHR2Q13324 411 aa11.88□□□□□ -0.51
LINC01550-203ENST00000512901 PPP4R3AQ6IN85 833 aa11.88□□□□□ -0.51
LINC01550-203ENST00000512901 PURBQ96QR8 312 aaKnown RBP11.88□□□□□ -0.51
LINC01550-203ENST00000512901 PXMP2Q9NR77 195 aa11.88□□□□□ -0.51
LINC01550-203ENST00000512901 DDX25Q9UHL0 483 aaKnown RBP11.88□□□□□ -0.51
LINC01550-203ENST00000512901 IVNS1ABPQ9Y6Y0 642 aa11.88□□□□□ -0.51
LINC01550-203ENST00000512901 ADGRA2Q96PE1 1338 aa11.87□□□□□ -0.51
LINC01550-203ENST00000512901 LAD1O00515 517 aa11.87□□□□□ -0.51
LINC01550-203ENST00000512901 CA12O43570 354 aa11.87□□□□□ -0.51
LINC01550-203ENST00000512901 GADD45BO75293 160 aaPredicted RBP11.87□□□□□ -0.51
LINC01550-203ENST00000512901 CYP3A4P08684 503 aa11.87□□□□□ -0.51
LINC01550-203ENST00000512901 UBE2HP62256 183 aa11.87□□□□□ -0.51
LINC01550-203ENST00000512901 MOXD1Q6UVY6 613 aa11.87□□□□□ -0.51
LINC01550-203ENST00000512901 POTEDQ86YR6 584 aa11.87□□□□□ -0.51
LINC01550-203ENST00000512901 KRI1Q8N9T8 703 aaKnown RBP11.87□□□□□ -0.51
LINC01550-203ENST00000512901 NSUN6Q8TEA1 469 aaKnown RBP11.87□□□□□ -0.51
LINC01550-203ENST00000512901 CRYGNQ8WXF5 182 aa11.87□□□□□ -0.51
LINC01550-203ENST00000512901 R3HDMLQ9H3Y0 253 aa11.87□□□□□ -0.51
LINC01550-203ENST00000512901 PCDHA7Q9UN72 937 aa11.87□□□□□ -0.51
LINC01550-203ENST00000512901 MRVI1Q9Y6F6 885 aa11.87□□□□□ -0.51
LINC01550-203ENST00000512901 RPTORQ8N122 1335 aa11.87□□□□□ -0.51
LINC01550-203ENST00000512901 ZNFX1Q9P2E3 1918 aaKnown RBP11.87□□□□□ -0.51
LINC01550-203ENST00000512901 OR52Z1P0C646 297 aa11.86□□□□□ -0.51
LINC01550-203ENST00000512901 BCRP11274 1271 aa11.86□□□□□ -0.51
LINC01550-203ENST00000512901 MYCLP12524 364 aaPredicted RBP11.86□□□□□ -0.51
LINC01550-203ENST00000512901 MAPK4P31152 587 aa11.86□□□□□ -0.51
LINC01550-203ENST00000512901 VEGFBP49765 207 aa11.86□□□□□ -0.51
LINC01550-203ENST00000512901 CALCRLQ16602 461 aa11.86□□□□□ -0.51
LINC01550-203ENST00000512901 PRR16Q569H4 304 aa11.86□□□□□ -0.51
LINC01550-203ENST00000512901 PDCD2LQ9BRP1 358 aa11.86□□□□□ -0.51
LINC01550-203ENST00000512901 ADD3Q9UEY8 706 aaKnown RBP11.86□□□□□ -0.51
LINC01550-203ENST00000512901 PLXNB2O15031 1838 aa11.86□□□□□ -0.51
LINC01550-203ENST00000512901 SLC37A4O43826 429 aa11.86□□□□□ -0.51
LINC01550-203ENST00000512901 EDIL3O43854 480 aa11.86□□□□□ -0.51
LINC01550-203ENST00000512901 CUTAO60888 179 aa11.86□□□□□ -0.51
LINC01550-203ENST00000512901 CIITAP33076 1130 aa11.86□□□□□ -0.51
LINC01550-203ENST00000512901 MAP2K2P36507 400 aa11.86□□□□□ -0.51
LINC01550-203ENST00000512901 CNTN2Q02246 1040 aa11.86□□□□□ -0.51
LINC01550-203ENST00000512901 PGM5Q15124 567 aa11.86□□□□□ -0.51
LINC01550-203ENST00000512901 PCNX4Q63HM2 1172 aa11.86□□□□□ -0.51
LINC01550-203ENST00000512901 C17orf99Q6UX52 265 aa11.86□□□□□ -0.51
LINC01550-203ENST00000512901 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.86□□□□□ -0.51
LINC01550-203ENST00000512901 DNERQ8NFT8 737 aa11.86□□□□□ -0.51
LINC01550-203ENST00000512901 FERMT2Q96AC1 680 aa11.86□□□□□ -0.51
LINC01550-203ENST00000512901 TMEM60Q9H2L4 133 aa11.86□□□□□ -0.51
LINC01550-203ENST00000512901 DDX49Q9Y6V7 483 aaKnown RBP11.86□□□□□ -0.51
LINC01550-203ENST00000512901 FRMPD4Q14CM0 1322 aa11.86□□□□□ -0.51
LINC01550-203ENST00000512901 LCTP09848 1927 aa11.85□□□□□ -0.51
LINC01550-203ENST00000512901 CYP3A7-CYP3A51PA0A087WV96 503 aa11.85□□□□□ -0.51
LINC01550-203ENST00000512901 STRNO43815 780 aa11.85□□□□□ -0.51
LINC01550-203ENST00000512901 ECM2O94769 699 aaPredicted RBP11.85□□□□□ -0.51
LINC01550-203ENST00000512901 PGK2P07205 417 aa11.85□□□□□ -0.51
LINC01550-203ENST00000512901 PTPREP23469 700 aa11.85□□□□□ -0.51
LINC01550-203ENST00000512901 CYP3A7P24462 503 aa11.85□□□□□ -0.51
LINC01550-203ENST00000512901 CCND2P30279 289 aa11.85□□□□□ -0.51
LINC01550-203ENST00000512901 ARL6IP4Q66PJ3 421 aaKnown RBP11.85□□□□□ -0.51
LINC01550-203ENST00000512901 ADALQ6DHV7 355 aa11.85□□□□□ -0.51
LINC01550-203ENST00000512901 DTHD1Q6ZMT9 781 aa11.85□□□□□ -0.51
LINC01550-203ENST00000512901 IL31RAQ8NI17 732 aa11.85□□□□□ -0.51
LINC01550-203ENST00000512901 ZFP91Q96JP5 570 aaPredicted RBP11.85□□□□□ -0.51
LINC01550-203ENST00000512901 CLIC6Q96NY7 704 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms