RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 WFDC12Q8WWY7 111 aa9.58□□□□□ -0.88
RFC1-214ENST00000512726 ARNT2Q9HBZ2 717 aa9.58□□□□□ -0.88
RFC1-214ENST00000512726 EMC7Q9NPA0 242 aa9.58□□□□□ -0.88
RFC1-214ENST00000512726 TRBV23OR9-2A0A075B6M9 112 aa9.57□□□□□ -0.88
RFC1-214ENST00000512726 SHISA3A0PJX4 238 aa9.57□□□□□ -0.88
RFC1-214ENST00000512726 MSCO60682 206 aa9.57□□□□□ -0.88
RFC1-214ENST00000512726 ABLIM3O94929 683 aa9.57□□□□□ -0.88
RFC1-214ENST00000512726 FAM87AP0C7U9 286 aa9.57□□□□□ -0.88
RFC1-214ENST00000512726 VAV1P15498 845 aa9.57□□□□□ -0.88
RFC1-214ENST00000512726 CCND1P24385 295 aa9.57□□□□□ -0.88
RFC1-214ENST00000512726 NOS3P29474 1203 aa9.57□□□□□ -0.88
RFC1-214ENST00000512726 KPNA1P52294 538 aaPredicted RBP9.57□□□□□ -0.88
RFC1-214ENST00000512726 GFOD2Q3B7J2 385 aa9.57□□□□□ -0.88
RFC1-214ENST00000512726 PPP4R4Q6NUP7 873 aa9.57□□□□□ -0.88
RFC1-214ENST00000512726 CCDC103Q8IW40 242 aa9.57□□□□□ -0.88
RFC1-214ENST00000512726 PANK1Q8TE04 598 aa9.57□□□□□ -0.88
RFC1-214ENST00000512726 JPH3Q8WXH2 748 aaPredicted RBP9.57□□□□□ -0.88
RFC1-214ENST00000512726 TCTN2Q96GX1 697 aa9.57□□□□□ -0.88
RFC1-214ENST00000512726 SLC12A9Q9BXP2 914 aa9.57□□□□□ -0.88
RFC1-214ENST00000512726 ARNTLO00327 626 aa9.56□□□□□ -0.88
RFC1-214ENST00000512726 CT47B1P0C2W7 299 aaPredicted RBP9.56□□□□□ -0.88
RFC1-214ENST00000512726 ZNF865P0CJ78 1059 aaPredicted RBP9.56□□□□□ -0.88
RFC1-214ENST00000512726 U2AF1L5P0DN76 240 aaPredicted RBP9.56□□□□□ -0.88
RFC1-214ENST00000512726 PAMP19021 973 aa9.56□□□□□ -0.88
RFC1-214ENST00000512726 ST5P78524 1137 aa9.56□□□□□ -0.88
RFC1-214ENST00000512726 U2AF1Q01081 240 aaKnown RBP eCLIP9.56□□□□□ -0.88
RFC1-214ENST00000512726 OS9Q13438 667 aaPredicted RBP9.56□□□□□ -0.88
RFC1-214ENST00000512726 HDGFL2Q7Z4V5 671 aaPredicted RBP9.56□□□□□ -0.88
RFC1-214ENST00000512726 FAM20CQ8IXL6 584 aa9.56□□□□□ -0.88
RFC1-214ENST00000512726 MFSD4AQ8N468 514 aa9.56□□□□□ -0.88
RFC1-214ENST00000512726 MAGEB6Q8N7X4 407 aa9.56□□□□□ -0.88
RFC1-214ENST00000512726 CHTF18Q8WVB6 975 aa9.56□□□□□ -0.88
RFC1-214ENST00000512726 FBXW5Q969U6 566 aa9.56□□□□□ -0.88
RFC1-214ENST00000512726 SPOCK3Q9BQ16 436 aa9.56□□□□□ -0.88
RFC1-214ENST00000512726 GPR62Q9BZJ7 368 aa9.56□□□□□ -0.88
RFC1-214ENST00000512726 KCNF1Q9H3M0 494 aa9.56□□□□□ -0.88
RFC1-214ENST00000512726 SPTLC3Q9NUV7 552 aa9.56□□□□□ -0.88
RFC1-214ENST00000512726 NPHP3-ACAD11A0A0J9YXS1 232 aa9.55□□□□□ -0.88
RFC1-214ENST00000512726 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.55□□□□□ -0.88
RFC1-214ENST00000512726 PTPDC1A2A3K4 754 aa9.55□□□□□ -0.88
RFC1-214ENST00000512726 IGF2BP3O00425 579 aaKnown RBP eCLIP9.55□□□□□ -0.88
RFC1-214ENST00000512726 WNT9AO14904 365 aa9.55□□□□□ -0.88
RFC1-214ENST00000512726 EIF5BO60841 1220 aaKnown RBP9.55□□□□□ -0.88
RFC1-214ENST00000512726 SNUPNO95149 360 aaKnown RBP9.55□□□□□ -0.88
RFC1-214ENST00000512726 SOD2P04179 222 aa9.55□□□□□ -0.88
RFC1-214ENST00000512726 GSTM1P09488 218 aa9.55□□□□□ -0.88
RFC1-214ENST00000512726 MYBL2P10244 700 aa9.55□□□□□ -0.88
RFC1-214ENST00000512726 LCP1P13796 627 aa9.55□□□□□ -0.88
RFC1-214ENST00000512726 ATP2A2P16615 1042 aaKnown RBP9.55□□□□□ -0.88
RFC1-214ENST00000512726 DNM2P50570 870 aa9.55□□□□□ -0.88
RFC1-214ENST00000512726 SESN3P58005 492 aa9.55□□□□□ -0.88
RFC1-214ENST00000512726 TNK2Q07912 1038 aa9.55□□□□□ -0.88
RFC1-214ENST00000512726 ARHGAP44Q17R89 818 aa9.55□□□□□ -0.88
RFC1-214ENST00000512726 ABCB5Q2M3G0 1257 aa9.55□□□□□ -0.88
RFC1-214ENST00000512726 CXorf57Q6NSI4 855 aaKnown RBP9.55□□□□□ -0.88
RFC1-214ENST00000512726 SLC4A10Q6U841 1118 aa9.55□□□□□ -0.88
RFC1-214ENST00000512726 FAM214BQ7L5A3 538 aa9.55□□□□□ -0.88
RFC1-214ENST00000512726 RCBTB1Q8NDN9 531 aa9.55□□□□□ -0.88
RFC1-214ENST00000512726 AHCYL2Q96HN2 611 aaKnown RBP9.55□□□□□ -0.88
RFC1-214ENST00000512726 SCYL1Q96KG9 808 aa9.55□□□□□ -0.88
RFC1-214ENST00000512726 MMP19Q99542 508 aa9.55□□□□□ -0.88
RFC1-214ENST00000512726 RHOBTB2Q9BYZ6 727 aa9.55□□□□□ -0.88
RFC1-214ENST00000512726 GPATCH2Q9NW75 528 aa9.55□□□□□ -0.88
RFC1-214ENST00000512726 IP6K2Q9UHH9 426 aa9.55□□□□□ -0.88
RFC1-214ENST00000512726 LUC7L2Q9Y383 392 aaKnown RBP9.55□□□□□ -0.88
RFC1-214ENST00000512726 WASHC2AQ641Q2 1341 aa9.55□□□□□ -0.88
RFC1-214ENST00000512726 CCDC66A2RUB6 948 aa9.54□□□□□ -0.88
RFC1-214ENST00000512726 GNAT3A8MTJ3 354 aa9.54□□□□□ -0.88
RFC1-214ENST00000512726 FAM47E-STBD1D6RA91 191 aa9.54□□□□□ -0.88
RFC1-214ENST00000512726 RBAK-RBAKDNI3L0D1 243 aa9.54□□□□□ -0.88
RFC1-214ENST00000512726 MECP2P51608 486 aaKnown RBP9.54□□□□□ -0.88
RFC1-214ENST00000512726 OVCH1Q7RTY7 1134 aa9.54□□□□□ -0.88
RFC1-214ENST00000512726 PODNQ7Z5L7 613 aa9.54□□□□□ -0.88
RFC1-214ENST00000512726 FUBP3Q96I24 572 aaKnown RBP eCLIP9.54□□□□□ -0.88
RFC1-214ENST00000512726 SLC13A1Q9BZW2 595 aa9.54□□□□□ -0.88
RFC1-214ENST00000512726 TRIT1Q9H3H1 467 aaKnown RBP9.54□□□□□ -0.88
RFC1-214ENST00000512726 CAPN6Q9Y6Q1 641 aa9.54□□□□□ -0.88
RFC1-214ENST00000512726 PRR33A8MZF0 331 aa9.53□□□□□ -0.88
RFC1-214ENST00000512726 MYO1BO43795 1136 aa9.53□□□□□ -0.88
RFC1-214ENST00000512726 ARHGEF15O94989 841 aa9.53□□□□□ -0.88
RFC1-214ENST00000512726 ZNF205O95201 554 aa9.53□□□□□ -0.88
RFC1-214ENST00000512726 SRFP11831 508 aa9.53□□□□□ -0.88
RFC1-214ENST00000512726 KLF1Q13351 362 aaPredicted RBP9.53□□□□□ -0.88
RFC1-214ENST00000512726 BEND4Q6ZU67 534 aa9.53□□□□□ -0.88
RFC1-214ENST00000512726 C16orf59Q7L2K0 433 aa9.53□□□□□ -0.88
RFC1-214ENST00000512726 ARMC10Q8N2F6 343 aa9.53□□□□□ -0.88
RFC1-214ENST00000512726 CBARPQ8N350 705 aaPredicted RBP9.53□□□□□ -0.88
RFC1-214ENST00000512726 C2orf69Q8N8R5 385 aa9.53□□□□□ -0.88
RFC1-214ENST00000512726 IPPKQ9H8X2 491 aa9.53□□□□□ -0.88
RFC1-214ENST00000512726 PCDHA2Q9Y5H9 948 aa9.53□□□□□ -0.88
RFC1-214ENST00000512726 COMMD10Q9Y6G5 202 aa9.53□□□□□ -0.88
RFC1-214ENST00000512726 SSU72P8A0A1W2PR75 194 aa9.52□□□□□ -0.89
RFC1-214ENST00000512726 FAM155AB1AL88 458 aaPredicted RBP9.52□□□□□ -0.89
RFC1-214ENST00000512726 PCBP3P57721 371 aaKnown RBP9.52□□□□□ -0.89
RFC1-214ENST00000512726 ERVK-21P61565 698 aa9.52□□□□□ -0.89
RFC1-214ENST00000512726 CYP27C1Q4G0S4 372 aa9.52□□□□□ -0.89
RFC1-214ENST00000512726 OGFOD3Q6PK18 319 aa9.52□□□□□ -0.89
RFC1-214ENST00000512726 DZIP1LQ8IYY4 767 aaKnown RBP9.52□□□□□ -0.89
RFC1-214ENST00000512726 SLC5A5Q92911 643 aa9.52□□□□□ -0.89
RFC1-214ENST00000512726 HEXIM2Q96MH2 286 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms