RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 HERC6Q8IVU3 1022 aa18.86■□□□□ 0.61
CXCL1-202ENST00000509101 RETREG2Q8NC44 543 aa18.86■□□□□ 0.61
CXCL1-202ENST00000509101 NKRFO15226 690 aaKnown RBP eCLIP18.85■□□□□ 0.61
CXCL1-202ENST00000509101 ORC4O43929 436 aa18.85■□□□□ 0.61
CXCL1-202ENST00000509101 CHMP4BP1P59074 171 aa18.85■□□□□ 0.61
CXCL1-202ENST00000509101 RRP12Q5JTH9 1297 aaKnown RBP18.85■□□□□ 0.61
CXCL1-202ENST00000509101 RNF207Q6ZRF8 634 aa18.85■□□□□ 0.61
CXCL1-202ENST00000509101 SPRED2Q7Z698 418 aa18.85■□□□□ 0.61
CXCL1-202ENST00000509101 PHOSPHO2Q8TCD6 241 aa18.85■□□□□ 0.61
CXCL1-202ENST00000509101 SCFD2Q8WU76 684 aa18.85■□□□□ 0.61
CXCL1-202ENST00000509101 CLEC4DQ8WXI8 215 aa18.85■□□□□ 0.61
CXCL1-202ENST00000509101 TMEM47Q9BQJ4 181 aa18.85■□□□□ 0.61
CXCL1-202ENST00000509101 ANAPC4Q9UJX5 808 aa18.85■□□□□ 0.61
CXCL1-202ENST00000509101 COG5Q9UP83 839 aa18.85■□□□□ 0.61
CXCL1-202ENST00000509101 NOD1Q9Y239 953 aa18.85■□□□□ 0.61
CXCL1-202ENST00000509101 SIP14410 1827 aa18.85■□□□□ 0.61
CXCL1-202ENST00000509101 TOP1P11387 765 aaKnown RBP18.84■□□□□ 0.61
CXCL1-202ENST00000509101 RPS6P62753 249 aaKnown RBP18.84■□□□□ 0.61
CXCL1-202ENST00000509101 BFSP2Q13515 415 aa18.84■□□□□ 0.61
CXCL1-202ENST00000509101 MPHOSPH6Q99547 160 aaKnown RBP18.84■□□□□ 0.61
CXCL1-202ENST00000509101 A6NJR5 290 aa18.83■□□□□ 0.6
CXCL1-202ENST00000509101 KIF28PB7ZC32 967 aa18.83■□□□□ 0.6
CXCL1-202ENST00000509101 ARIH2O95376 493 aa18.83■□□□□ 0.6
CXCL1-202ENST00000509101 MX1P20591 662 aa18.83■□□□□ 0.6
CXCL1-202ENST00000509101 EDNRBP24530 442 aa18.83■□□□□ 0.6
CXCL1-202ENST00000509101 KCNJ6P48051 423 aa18.83■□□□□ 0.6
CXCL1-202ENST00000509101 PTPN11Q06124 597 aaPredicted RBP18.83■□□□□ 0.6
CXCL1-202ENST00000509101 GRB10Q13322 594 aa18.83■□□□□ 0.6
CXCL1-202ENST00000509101 TLL1O43897 1013 aa18.82■□□□□ 0.6
CXCL1-202ENST00000509101 KPNA6O60684 536 aa18.82■□□□□ 0.6
CXCL1-202ENST00000509101 BAIAP3O94812 1187 aa18.82■□□□□ 0.6
CXCL1-202ENST00000509101 TXNP10599 105 aaKnown RBP18.82■□□□□ 0.6
CXCL1-202ENST00000509101 PDHBP11177 359 aa18.82■□□□□ 0.6
CXCL1-202ENST00000509101 HLA-CQ95604 372 aa18.82■□□□□ 0.6
CXCL1-202ENST00000509101 EPHX3Q9H6B9 360 aa18.82■□□□□ 0.6
CXCL1-202ENST00000509101 MYH7BA7E2Y1 1941 aa18.82■□□□□ 0.6
CXCL1-202ENST00000509101 LAMA4Q16363 1823 aa18.81■□□□□ 0.6
CXCL1-202ENST00000509101 WDR19Q8NEZ3 1342 aa18.81■□□□□ 0.6
CXCL1-202ENST00000509101 LCHNA4D1U4 455 aa18.81■□□□□ 0.6
CXCL1-202ENST00000509101 FGRP09769 529 aa18.81■□□□□ 0.6
CXCL1-202ENST00000509101 PTGISQ16647 500 aa18.81■□□□□ 0.6
CXCL1-202ENST00000509101 TMCO2Q7Z6W1 182 aaPredicted RBP18.81■□□□□ 0.6
CXCL1-202ENST00000509101 CCDC155Q8N6L0 562 aa18.81■□□□□ 0.6
CXCL1-202ENST00000509101 DNERQ8NFT8 737 aa18.81■□□□□ 0.6
CXCL1-202ENST00000509101 GDPD5Q8WTR4 605 aa18.81■□□□□ 0.6
CXCL1-202ENST00000509101 LPXNO60711 386 aa18.8■□□□□ 0.6
CXCL1-202ENST00000509101 WDR5P61964 334 aaKnown RBP18.8■□□□□ 0.6
CXCL1-202ENST00000509101 ZNF543Q08ER8 600 aa18.8■□□□□ 0.6
CXCL1-202ENST00000509101 USH1GQ495M9 461 aa18.8■□□□□ 0.6
CXCL1-202ENST00000509101 LRFN3Q9BTN0 628 aa18.8■□□□□ 0.6
CXCL1-202ENST00000509101 PNMA2Q9UL42 364 aa18.8■□□□□ 0.6
CXCL1-202ENST00000509101 SALL3Q9BXA9 1300 aa18.79■□□□□ 0.6
CXCL1-202ENST00000509101 MMP3P08254 477 aa18.79■□□□□ 0.6
CXCL1-202ENST00000509101 DEFB103AP81534 67 aa18.79■□□□□ 0.6
CXCL1-202ENST00000509101 ALX1Q15699 326 aa18.79■□□□□ 0.6
CXCL1-202ENST00000509101 GDF6Q6KF10 455 aaPredicted RBP18.79■□□□□ 0.6
CXCL1-202ENST00000509101 CAGE1Q8TC20 777 aa18.79■□□□□ 0.6
CXCL1-202ENST00000509101 AFAP1L1Q8TED9 768 aa18.79■□□□□ 0.6
CXCL1-202ENST00000509101 AFG1LQ8WV93 481 aa18.79■□□□□ 0.6
CXCL1-202ENST00000509101 CTAGE1Q96RT6 745 aa18.79■□□□□ 0.6
CXCL1-202ENST00000509101 TCP11L1Q9NUJ3 509 aa18.79■□□□□ 0.6
CXCL1-202ENST00000509101 HCN4Q9Y3Q4 1203 aa18.79■□□□□ 0.6
CXCL1-202ENST00000509101 MICAL3Q7RTP6 2002 aa18.78■□□□□ 0.6
CXCL1-202ENST00000509101 B4DLN1 442 aa18.78■□□□□ 0.6
CXCL1-202ENST00000509101 MRPL12P52815 198 aaKnown RBP18.78■□□□□ 0.6
CXCL1-202ENST00000509101 HAND2P61296 217 aa18.78■□□□□ 0.6
CXCL1-202ENST00000509101 LRRC8DQ7L1W4 858 aa18.78■□□□□ 0.6
CXCL1-202ENST00000509101 DHX38Q92620 1227 aaKnown RBP18.78■□□□□ 0.6
CXCL1-202ENST00000509101 KHSRPQ92945 711 aaKnown RBP eCLIP18.78■□□□□ 0.6
CXCL1-202ENST00000509101 ZBED2Q9BTP6 218 aa18.78■□□□□ 0.6
CXCL1-202ENST00000509101 MTUS1Q9ULD2 1270 aa18.78■□□□□ 0.6
CXCL1-202ENST00000509101 PCDHB15Q9Y5E8 787 aa18.78■□□□□ 0.6
CXCL1-202ENST00000509101 A0A0D9SFI3 127 aa18.77■□□□□ 0.6
CXCL1-202ENST00000509101 RBAK-RBAKDNI3L0D1 243 aa18.77■□□□□ 0.6
CXCL1-202ENST00000509101 FGAP02671 866 aa18.77■□□□□ 0.6
CXCL1-202ENST00000509101 SNHG28P0DPA3 235 aa18.77■□□□□ 0.6
CXCL1-202ENST00000509101 SELPP16109 830 aa18.77■□□□□ 0.6
CXCL1-202ENST00000509101 LY6KQ17RY6 165 aa18.77■□□□□ 0.6
CXCL1-202ENST00000509101 TMEM31Q5JXX7 168 aa18.77■□□□□ 0.6
CXCL1-202ENST00000509101 CCDC62Q6P9F0 684 aa18.77■□□□□ 0.6
CXCL1-202ENST00000509101 CHST3Q7LGC8 479 aa18.77■□□□□ 0.6
CXCL1-202ENST00000509101 FAM227BQ96M60 508 aa18.77■□□□□ 0.6
CXCL1-202ENST00000509101 CPVLQ9H3G5 476 aa18.77■□□□□ 0.6
CXCL1-202ENST00000509101 HELLSQ9NRZ9 838 aa18.77■□□□□ 0.6
CXCL1-202ENST00000509101 GH1P01241 217 aa18.76■□□□□ 0.59
CXCL1-202ENST00000509101 GOLGA8HP0CJ92 632 aa18.76■□□□□ 0.59
CXCL1-202ENST00000509101 HOXD11P31277 338 aaPredicted RBP18.76■□□□□ 0.59
CXCL1-202ENST00000509101 ARHGAP1Q07960 439 aa18.76■□□□□ 0.59
CXCL1-202ENST00000509101 GPNMBQ14956 572 aa18.76■□□□□ 0.59
CXCL1-202ENST00000509101 CNKSR3Q6P9H4 555 aa18.76■□□□□ 0.59
CXCL1-202ENST00000509101 SEPT14Q6ZU15 432 aa18.76■□□□□ 0.59
CXCL1-202ENST00000509101 SESTD1Q86VW0 696 aa18.76■□□□□ 0.59
CXCL1-202ENST00000509101 KAT2BQ92831 832 aa18.76■□□□□ 0.59
CXCL1-202ENST00000509101 EVI5LQ96CN4 794 aa18.76■□□□□ 0.59
CXCL1-202ENST00000509101 ZMYM6O95789 1325 aa18.75■□□□□ 0.59
CXCL1-202ENST00000509101 FAM86C2PA6NEL3 165 aa18.75■□□□□ 0.59
CXCL1-202ENST00000509101 TCTN1Q2MV58 587 aa18.75■□□□□ 0.59
CXCL1-202ENST00000509101 TBC1D10CQ8IV04 446 aa18.75■□□□□ 0.59
CXCL1-202ENST00000509101 NLRC5Q86WI3 1866 aa18.74■□□□□ 0.59
CXCL1-202ENST00000509101 NBNO60934 754 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms