RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 SYT3Q9BQG1 590 aa7.57□□□□□ -1.2
TRAPPC13-209ENST00000508304 BCL11AQ9H165 835 aa7.57□□□□□ -1.2
TRAPPC13-209ENST00000508304 PCDH18Q9HCL0 1135 aa7.57□□□□□ -1.2
TRAPPC13-209ENST00000508304 CGGBP1Q9UFW8 167 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC13-209ENST00000508304 SRRDQ9UH36 339 aa7.57□□□□□ -1.2
TRAPPC13-209ENST00000508304 INVSQ9Y283 1065 aa7.57□□□□□ -1.2
TRAPPC13-209ENST00000508304 TRBV23OR9-2A0A075B6M9 112 aa7.56□□□□□ -1.2
TRAPPC13-209ENST00000508304 NPHP3-ACAD11A0A0J9YXS1 232 aa7.56□□□□□ -1.2
TRAPPC13-209ENST00000508304 C7orf72A4D263 438 aa7.56□□□□□ -1.2
TRAPPC13-209ENST00000508304 SUV39H1O43463 412 aa7.56□□□□□ -1.2
TRAPPC13-209ENST00000508304 NTRK1P04629 796 aa7.56□□□□□ -1.2
TRAPPC13-209ENST00000508304 EPHX1P07099 455 aa7.56□□□□□ -1.2
TRAPPC13-209ENST00000508304 ZNF76P36508 570 aa7.56□□□□□ -1.2
TRAPPC13-209ENST00000508304 AMPD2Q01433 879 aa7.56□□□□□ -1.2
TRAPPC13-209ENST00000508304 GRB10Q13322 594 aa7.56□□□□□ -1.2
TRAPPC13-209ENST00000508304 GNPTABQ3T906 1256 aa7.56□□□□□ -1.2
TRAPPC13-209ENST00000508304 HEATR6Q6AI08 1181 aaKnown RBP7.56□□□□□ -1.2
TRAPPC13-209ENST00000508304 LGI4Q8N135 537 aa7.56□□□□□ -1.2
TRAPPC13-209ENST00000508304 ARHGEF39Q8N4T4 335 aa7.56□□□□□ -1.2
TRAPPC13-209ENST00000508304 KYQ8NBH2 561 aa7.56□□□□□ -1.2
TRAPPC13-209ENST00000508304 USP33Q8TEY7 942 aa7.56□□□□□ -1.2
TRAPPC13-209ENST00000508304 SLC12A7Q9Y666 1083 aa7.56□□□□□ -1.2
TRAPPC13-209ENST00000508304 NPHS1O60500 1241 aa7.55□□□□□ -1.2
TRAPPC13-209ENST00000508304 PPM1BO75688 479 aa7.55□□□□□ -1.2
TRAPPC13-209ENST00000508304 RBM10P98175 930 aaKnown RBP7.55□□□□□ -1.2
TRAPPC13-209ENST00000508304 ZNF394Q53GI3 561 aa7.55□□□□□ -1.2
TRAPPC13-209ENST00000508304 PRR31Q5SQ13 230 aa7.55□□□□□ -1.2
TRAPPC13-209ENST00000508304 ETV3LQ6ZN32 361 aa7.55□□□□□ -1.2
TRAPPC13-209ENST00000508304 MIB1Q86YT6 1006 aa7.55□□□□□ -1.2
TRAPPC13-209ENST00000508304 PLEKHO2Q8TD55 490 aa7.55□□□□□ -1.2
TRAPPC13-209ENST00000508304 RCC1LQ96I51 464 aaKnown RBP7.55□□□□□ -1.2
TRAPPC13-209ENST00000508304 PHAXQ9H814 394 aaKnown RBP7.55□□□□□ -1.2
TRAPPC13-209ENST00000508304 PCDHGB7Q9Y5F8 929 aa7.55□□□□□ -1.2
TRAPPC13-209ENST00000508304 MROH6A6NGR9 719 aa7.54□□□□□ -1.2
TRAPPC13-209ENST00000508304 FSHBP01225 129 aa7.54□□□□□ -1.2
TRAPPC13-209ENST00000508304 FUCA1P04066 466 aa7.54□□□□□ -1.2
TRAPPC13-209ENST00000508304 FANCCQ00597 558 aa7.54□□□□□ -1.2
TRAPPC13-209ENST00000508304 ADAT2Q7Z6V5 191 aaKnown RBP7.54□□□□□ -1.2
TRAPPC13-209ENST00000508304 DCP2Q8IU60 420 aaKnown RBP7.54□□□□□ -1.2
TRAPPC13-209ENST00000508304 DVL3Q92997 716 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC13-209ENST00000508304 FGD4Q96M96 766 aa7.54□□□□□ -1.2
TRAPPC13-209ENST00000508304 SLC7A5Q01650 507 aa7.53□□□□□ -1.2
TRAPPC13-209ENST00000508304 C9orf131Q5VYM1 1079 aa7.53□□□□□ -1.2
TRAPPC13-209ENST00000508304 MBLAC2Q68D91 279 aa7.53□□□□□ -1.2
TRAPPC13-209ENST00000508304 BORAQ6PGQ7 559 aa7.53□□□□□ -1.2
TRAPPC13-209ENST00000508304 CCDC81Q6ZN84 652 aa7.53□□□□□ -1.2
TRAPPC13-209ENST00000508304 FAM26EQ8N5C1 309 aa7.53□□□□□ -1.2
TRAPPC13-209ENST00000508304 TTLL6Q8N841 843 aa7.53□□□□□ -1.2
TRAPPC13-209ENST00000508304 KLHL6Q8WZ60 621 aa7.53□□□□□ -1.2
TRAPPC13-209ENST00000508304 SORCS2Q96PQ0 1159 aa7.53□□□□□ -1.2
TRAPPC13-209ENST00000508304 PCDHB10Q9UN67 800 aa7.53□□□□□ -1.2
TRAPPC13-209ENST00000508304 COL9A2Q14055 689 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC13-209ENST00000508304 FAM124AQ86V42 546 aa7.52□□□□□ -1.21
TRAPPC13-209ENST00000508304 C19orf47Q8N9M1 422 aaKnown RBP7.52□□□□□ -1.21
TRAPPC13-209ENST00000508304 TXNDC5Q8NBS9 432 aaKnown RBP7.52□□□□□ -1.21
TRAPPC13-209ENST00000508304 CHST13Q8NET6 341 aa7.52□□□□□ -1.21
TRAPPC13-209ENST00000508304 DPF3Q92784 378 aa7.52□□□□□ -1.21
TRAPPC13-209ENST00000508304 METTL5Q9NRN9 209 aaKnown RBP7.52□□□□□ -1.21
TRAPPC13-209ENST00000508304 A0A1W2PQH9 124 aa7.51□□□□□ -1.21
TRAPPC13-209ENST00000508304 SGSM2O43147 1006 aa7.51□□□□□ -1.21
TRAPPC13-209ENST00000508304 ITGA1P56199 1179 aa7.51□□□□□ -1.21
TRAPPC13-209ENST00000508304 RACK1P63244 317 aaKnown RBP7.51□□□□□ -1.21
TRAPPC13-209ENST00000508304 MCTP2Q6DN12 878 aa7.51□□□□□ -1.21
TRAPPC13-209ENST00000508304 ZNF513Q8N8E2 541 aaPredicted RBP7.51□□□□□ -1.21
TRAPPC13-209ENST00000508304 COPS5Q92905 334 aa7.51□□□□□ -1.21
TRAPPC13-209ENST00000508304 CRBNQ96SW2 442 aa7.51□□□□□ -1.21
TRAPPC13-209ENST00000508304 MMP19Q99542 508 aa7.51□□□□□ -1.21
TRAPPC13-209ENST00000508304 SCAND2PQ9GZW5 306 aaPredicted RBP7.51□□□□□ -1.21
TRAPPC13-209ENST00000508304 AP5M1Q9H0R1 490 aa7.51□□□□□ -1.21
TRAPPC13-209ENST00000508304 GZF1Q9H116 711 aaPredicted RBP7.51□□□□□ -1.21
TRAPPC13-209ENST00000508304 ST6GALNAC2Q9UJ37 374 aa7.51□□□□□ -1.21
TRAPPC13-209ENST00000508304 C6P13671 934 aa7.5□□□□□ -1.21
TRAPPC13-209ENST00000508304 CDSNQ15517 529 aa7.5□□□□□ -1.21
TRAPPC13-209ENST00000508304 GLB1LQ6UWU2 654 aa7.5□□□□□ -1.21
TRAPPC13-209ENST00000508304 CD300LDQ6UXZ3 194 aa7.5□□□□□ -1.21
TRAPPC13-209ENST00000508304 LIMS2Q7Z4I7 341 aa7.5□□□□□ -1.21
TRAPPC13-209ENST00000508304 GINM1Q9NU53 330 aa7.5□□□□□ -1.21
TRAPPC13-209ENST00000508304 MARCH2Q9P0N8 246 aa7.5□□□□□ -1.21
TRAPPC13-209ENST00000508304 CLEC1BQ9P126 229 aa7.5□□□□□ -1.21
TRAPPC13-209ENST00000508304 ZNF536O15090 1300 aa7.5□□□□□ -1.21
TRAPPC13-209ENST00000508304 PLS3P13797 630 aa7.49□□□□□ -1.21
TRAPPC13-209ENST00000508304 TACR2P21452 398 aa7.49□□□□□ -1.21
TRAPPC13-209ENST00000508304 GIPRP48546 466 aa7.49□□□□□ -1.21
TRAPPC13-209ENST00000508304 STK32CQ86UX6 486 aa7.49□□□□□ -1.21
TRAPPC13-209ENST00000508304 ZC3H18Q86VM9 953 aaKnown RBP7.49□□□□□ -1.21
TRAPPC13-209ENST00000508304 Q8N1X5 172 aa7.49□□□□□ -1.21
TRAPPC13-209ENST00000508304 SEC14L1Q92503 715 aa7.49□□□□□ -1.21
TRAPPC13-209ENST00000508304 BACH2Q9BYV9 841 aa7.49□□□□□ -1.21
TRAPPC13-209ENST00000508304 DDX41Q9UJV9 622 aaKnown RBP7.49□□□□□ -1.21
TRAPPC13-209ENST00000508304 SUGT1Q9Y2Z0 365 aa7.49□□□□□ -1.21
TRAPPC13-209ENST00000508304 TSC22D4Q9Y3Q8 395 aa7.49□□□□□ -1.21
TRAPPC13-209ENST00000508304 C9orf118A6NHY6 69 aa7.48□□□□□ -1.21
TRAPPC13-209ENST00000508304 DDX3XO00571 662 aaKnown RBP eCLIP7.48□□□□□ -1.21
TRAPPC13-209ENST00000508304 B4GALT3O60512 393 aa7.48□□□□□ -1.21
TRAPPC13-209ENST00000508304 SLC6A11P48066 632 aa7.48□□□□□ -1.21
TRAPPC13-209ENST00000508304 SOX9P48436 509 aa7.48□□□□□ -1.21
TRAPPC13-209ENST00000508304 EIF6P56537 245 aaKnown RBP7.48□□□□□ -1.21
TRAPPC13-209ENST00000508304 SPRED1Q7Z699 444 aa7.48□□□□□ -1.21
TRAPPC13-209ENST00000508304 FAM126BQ8IXS8 530 aa7.48□□□□□ -1.21
TRAPPC13-209ENST00000508304 SH3RF3Q8TEJ3 882 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms