RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 GDPD2Q9HCC8 539 aa15.93■□□□□ 0.14
SERF1B-204ENST00000506542 HMX1Q9NP08 348 aaPredicted RBP15.93■□□□□ 0.14
SERF1B-204ENST00000506542 V9GY48 417 aaPredicted RBP15.93■□□□□ 0.14
SERF1B-204ENST00000506542 ASTN1O14525 1302 aa15.93■□□□□ 0.14
SERF1B-204ENST00000506542 KLRF2D3W0D1 207 aa15.92■□□□□ 0.14
SERF1B-204ENST00000506542 GJB1P08034 283 aa15.92■□□□□ 0.14
SERF1B-204ENST00000506542 CNGA1P29973 690 aa15.92■□□□□ 0.14
SERF1B-204ENST00000506542 GJA8P48165 433 aa15.92■□□□□ 0.14
SERF1B-204ENST00000506542 CDC37Q16543 378 aaPredicted RBP15.92■□□□□ 0.14
SERF1B-204ENST00000506542 ASPRV1Q53RT3 343 aa15.92■□□□□ 0.14
SERF1B-204ENST00000506542 GPATCH4Q5T3I0 446 aaKnown RBP15.92■□□□□ 0.14
SERF1B-204ENST00000506542 NSMFQ6X4W1 530 aa15.92■□□□□ 0.14
SERF1B-204ENST00000506542 DIS3LQ8TF46 1054 aaKnown RBP15.92■□□□□ 0.14
SERF1B-204ENST00000506542 ACAD9Q9H845 621 aa15.92■□□□□ 0.14
SERF1B-204ENST00000506542 RPTORQ8N122 1335 aa15.92■□□□□ 0.14
SERF1B-204ENST00000506542 DNAJC25-GNG10A0A024R161 153 aa15.92■□□□□ 0.14
SERF1B-204ENST00000506542 FIBPO43427 364 aa15.92■□□□□ 0.14
SERF1B-204ENST00000506542 PPP1R11O60927 126 aaPredicted RBP15.92■□□□□ 0.14
SERF1B-204ENST00000506542 SGPL1O95470 568 aa15.92■□□□□ 0.14
SERF1B-204ENST00000506542 MLLT1Q03111 559 aaPredicted RBP15.92■□□□□ 0.14
SERF1B-204ENST00000506542 CSPP1Q1MSJ5 1256 aa15.92■□□□□ 0.14
SERF1B-204ENST00000506542 QRICH1Q2TAL8 776 aa15.92■□□□□ 0.14
SERF1B-204ENST00000506542 BRAPQ7Z569 592 aa15.92■□□□□ 0.14
SERF1B-204ENST00000506542 LENG1Q96BZ8 264 aaPredicted RBP15.92■□□□□ 0.14
SERF1B-204ENST00000506542 PCDH10Q9P2E7 1040 aa15.92■□□□□ 0.14
SERF1B-204ENST00000506542 CYTH3O43739 400 aa15.91■□□□□ 0.14
SERF1B-204ENST00000506542 TFRCP02786 760 aaKnown RBP15.91■□□□□ 0.14
SERF1B-204ENST00000506542 MMP1P03956 469 aa15.91■□□□□ 0.14
SERF1B-204ENST00000506542 CYBAP13498 195 aa15.91■□□□□ 0.14
SERF1B-204ENST00000506542 XBP1P17861 261 aa15.91■□□□□ 0.14
SERF1B-204ENST00000506542 SMARCA1P28370 1054 aa15.91■□□□□ 0.14
SERF1B-204ENST00000506542 MFSD14CQ5VZR4 134 aa15.91■□□□□ 0.14
SERF1B-204ENST00000506542 SLC30A10Q6XR72 485 aa15.91■□□□□ 0.14
SERF1B-204ENST00000506542 CHST13Q8NET6 341 aa15.91■□□□□ 0.14
SERF1B-204ENST00000506542 CLEC4DQ8WXI8 215 aa15.91■□□□□ 0.14
SERF1B-204ENST00000506542 TBC1D5Q92609 795 aa15.91■□□□□ 0.14
SERF1B-204ENST00000506542 SPZ1Q9BXG8 430 aa15.91■□□□□ 0.14
SERF1B-204ENST00000506542 SCAND2PQ9GZW5 306 aaPredicted RBP15.91■□□□□ 0.14
SERF1B-204ENST00000506542 CEP290O15078 2479 aa15.9■□□□□ 0.14
SERF1B-204ENST00000506542 hCG_1642624A0A1W2PR95 340 aa15.9■□□□□ 0.14
SERF1B-204ENST00000506542 SOWAHBA6NEL2 793 aa15.9■□□□□ 0.14
SERF1B-204ENST00000506542 KIF28PB7ZC32 967 aa15.9■□□□□ 0.14
SERF1B-204ENST00000506542 FDX1P10109 184 aa15.9■□□□□ 0.14
SERF1B-204ENST00000506542 SCG2P13521 617 aa15.9■□□□□ 0.14
SERF1B-204ENST00000506542 PTGS1P23219 599 aa15.9■□□□□ 0.14
SERF1B-204ENST00000506542 COPB2P35606 906 aa15.9■□□□□ 0.14
SERF1B-204ENST00000506542 PFKFB3Q16875 520 aaPredicted RBP15.9■□□□□ 0.14
SERF1B-204ENST00000506542 KLHL40Q2TBA0 621 aa15.9■□□□□ 0.14
SERF1B-204ENST00000506542 OLFML2BQ68BL8 750 aa15.9■□□□□ 0.14
SERF1B-204ENST00000506542 ATL3Q6DD88 541 aa15.9■□□□□ 0.14
SERF1B-204ENST00000506542 HOMER1Q86YM7 354 aa15.9■□□□□ 0.14
SERF1B-204ENST00000506542 ELP1O95163 1332 aa15.89■□□□□ 0.14
SERF1B-204ENST00000506542 U2AF2P26368 475 aaKnown RBP eCLIP15.89■□□□□ 0.13
SERF1B-204ENST00000506542 BAATQ14032 418 aaPredicted RBP15.89■□□□□ 0.13
SERF1B-204ENST00000506542 LHX8Q68G74 356 aa15.89■□□□□ 0.13
SERF1B-204ENST00000506542 TRMT44Q8IYL2 757 aaKnown RBP15.89■□□□□ 0.13
SERF1B-204ENST00000506542 PIGSQ96S52 555 aa15.89■□□□□ 0.13
SERF1B-204ENST00000506542 TINF2Q9BSI4 451 aa15.89■□□□□ 0.13
SERF1B-204ENST00000506542 CYP39A1Q9NYL5 469 aa15.89■□□□□ 0.13
SERF1B-204ENST00000506542 CFAP45Q9UL16 551 aa15.89■□□□□ 0.13
SERF1B-204ENST00000506542 KCNJ14Q9UNX9 436 aa15.89■□□□□ 0.13
SERF1B-204ENST00000506542 SNAI1O95863 264 aaPredicted RBP15.89■□□□□ 0.13
SERF1B-204ENST00000506542 MNX1P50219 401 aaPredicted RBP15.89■□□□□ 0.13
SERF1B-204ENST00000506542 SAFBQ15424 915 aaKnown RBP eCLIP15.89■□□□□ 0.13
SERF1B-204ENST00000506542 FAM133AQ8N9E0 248 aa15.89■□□□□ 0.13
SERF1B-204ENST00000506542 ZNF396Q96N95 335 aaPredicted RBP15.89■□□□□ 0.13
SERF1B-204ENST00000506542 PHF20Q9BVI0 1012 aa15.89■□□□□ 0.13
SERF1B-204ENST00000506542 VPS54Q9P1Q0 977 aa15.89■□□□□ 0.13
SERF1B-204ENST00000506542 TFIP11Q9UBB9 837 aaKnown RBP15.89■□□□□ 0.13
SERF1B-204ENST00000506542 FBXO40Q9UH90 709 aa15.89■□□□□ 0.13
SERF1B-204ENST00000506542 LRRC37A2A6NM11 1700 aa15.88■□□□□ 0.13
SERF1B-204ENST00000506542 ALPK3Q96L96 1907 aa15.88■□□□□ 0.13
SERF1B-204ENST00000506542 POTEB2H3BUK9 544 aa15.88■□□□□ 0.13
SERF1B-204ENST00000506542 MBD3O95983 291 aa15.88■□□□□ 0.13
SERF1B-204ENST00000506542 CALML3P27482 149 aa15.88■□□□□ 0.13
SERF1B-204ENST00000506542 MYSM1Q5VVJ2 828 aa15.88■□□□□ 0.13
SERF1B-204ENST00000506542 DIS3L2Q8IYB7 885 aaKnown RBP15.88■□□□□ 0.13
SERF1B-204ENST00000506542 GPT2Q8TD30 523 aa15.88■□□□□ 0.13
SERF1B-204ENST00000506542 CRISPLD2Q9H0B8 497 aa15.88■□□□□ 0.13
SERF1B-204ENST00000506542 FOXP1Q9H334 677 aaPredicted RBP15.88■□□□□ 0.13
SERF1B-204ENST00000506542 SLC5A4Q9NY91 659 aa15.88■□□□□ 0.13
SERF1B-204ENST00000506542 ADCY6O43306 1168 aa15.87■□□□□ 0.13
SERF1B-204ENST00000506542 GADD45BO75293 160 aaPredicted RBP15.87■□□□□ 0.13
SERF1B-204ENST00000506542 IRX5P78411 483 aaPredicted RBP15.87■□□□□ 0.13
SERF1B-204ENST00000506542 GNL2Q13823 731 aaKnown RBP15.87■□□□□ 0.13
SERF1B-204ENST00000506542 TKFCQ3LXA3 575 aa15.87■□□□□ 0.13
SERF1B-204ENST00000506542 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.87■□□□□ 0.13
SERF1B-204ENST00000506542 EEPD1Q7L9B9 569 aa15.87■□□□□ 0.13
SERF1B-204ENST00000506542 LEO1Q8WVC0 666 aaPredicted RBP15.87■□□□□ 0.13
SERF1B-204ENST00000506542 SPATA32Q96LK8 384 aa15.87■□□□□ 0.13
SERF1B-204ENST00000506542 USP28Q96RU2 1077 aa15.87■□□□□ 0.13
SERF1B-204ENST00000506542 RIOX1Q9H6W3 641 aa15.87■□□□□ 0.13
SERF1B-204ENST00000506542 SH3GLB2Q9NR46 395 aa15.87■□□□□ 0.13
SERF1B-204ENST00000506542 RANBP2P49792 3224 aaKnown RBP15.87■□□□□ 0.13
SERF1B-204ENST00000506542 BTBD18B2RXH4 712 aa15.86■□□□□ 0.13
SERF1B-204ENST00000506542 OPLAHO14841 1288 aa15.86■□□□□ 0.13
SERF1B-204ENST00000506542 FARP2O94887 1054 aaPredicted RBP15.86■□□□□ 0.13
SERF1B-204ENST00000506542 MYCNP04198 464 aaPredicted RBP15.86■□□□□ 0.13
SERF1B-204ENST00000506542 UBE2HP62256 183 aa15.86■□□□□ 0.13
SERF1B-204ENST00000506542 TMEM63BQ5T3F8 832 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms