RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 CYP2C19P33261 490 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 GJA8P48165 433 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 RGS19P49795 217 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 MRPL12P52815 198 aaKnown RBP8.42□□□□□ -1.06
GYPB-206ENST00000506516 ANAPC15P60006 121 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 TRIM32Q13049 653 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 BAATQ14032 418 aaPredicted RBP8.42□□□□□ -1.06
GYPB-206ENST00000506516 QRICH1Q2TAL8 776 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 USH1GQ495M9 461 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 MUM1L1Q5H9M0 696 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 MAP3K21Q5TCX8 1036 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 NSMFQ6X4W1 530 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 RNF207Q6ZRF8 634 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 HOMER1Q86YM7 354 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 CCDC144CPQ8IYA2 1237 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 FBXL16Q8N461 479 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 TATDN2Q93075 761 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 MTMR8Q96EF0 704 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 RRP36Q96EU6 259 aaKnown RBP8.42□□□□□ -1.06
GYPB-206ENST00000506516 TCEANC2Q96MN5 208 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 DEFB118Q96PH6 123 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 MPHOSPH6Q99547 160 aaKnown RBP8.42□□□□□ -1.06
GYPB-206ENST00000506516 TINF2Q9BSI4 451 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 MYL10Q9BUA6 226 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 TMUB1Q9BVT8 246 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.42□□□□□ -1.06
GYPB-206ENST00000506516 A1CFQ9NQ94 594 aaKnown RBP8.42□□□□□ -1.06
GYPB-206ENST00000506516 PAK6Q9NQU5 681 aaPredicted RBP8.42□□□□□ -1.06
GYPB-206ENST00000506516 CYP39A1Q9NYL5 469 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 FLRT1Q9NZU1 646 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 ADD3Q9UEY8 706 aaKnown RBP8.42□□□□□ -1.06
GYPB-206ENST00000506516 SEC63Q9UGP8 760 aaKnown RBP8.42□□□□□ -1.06
GYPB-206ENST00000506516 NRBP1Q9UHY1 535 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 NAP1L2Q9ULW6 460 aaPredicted RBP8.42□□□□□ -1.06
GYPB-206ENST00000506516 CNPY2Q9Y2B0 182 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 GTF3C3Q9Y5Q9 886 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 RLFQ13129 1914 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 HTTP42858 3142 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 MGAMO43451 1857 aa8.41□□□□□ -1.06
GYPB-206ENST00000506516 ZSWIM8A7E2V4 1837 aa8.41□□□□□ -1.06
GYPB-206ENST00000506516 A0A0G2JMZ2 1700 aa8.41□□□□□ -1.06
GYPB-206ENST00000506516 SYNGAP1Q96PV0 1343 aa8.41□□□□□ -1.06
GYPB-206ENST00000506516 PNMA6FA0A0J9YX94 578 aa8.41□□□□□ -1.06
GYPB-206ENST00000506516 KLF18A0A0U1RQI7 1052 aa8.41□□□□□ -1.06
GYPB-206ENST00000506516 PTPDC1A2A3K4 754 aa8.41□□□□□ -1.06
GYPB-206ENST00000506516 ASB14A6NK59 587 aa8.41□□□□□ -1.06
GYPB-206ENST00000506516 MSCO60682 206 aa8.41□□□□□ -1.06
GYPB-206ENST00000506516 EN2P19622 333 aaPredicted RBP8.41□□□□□ -1.06
GYPB-206ENST00000506516 RXRAP19793 462 aa8.41□□□□□ -1.06
GYPB-206ENST00000506516 RCAN1P53805 252 aa8.41□□□□□ -1.06
GYPB-206ENST00000506516 LSM11P83369 360 aaKnown RBP eCLIP8.41□□□□□ -1.06
GYPB-206ENST00000506516 COL9A3Q14050 684 aaPredicted RBP8.41□□□□□ -1.06
GYPB-206ENST00000506516 APOA5Q6Q788 366 aa8.41□□□□□ -1.06
GYPB-206ENST00000506516 MAMDC4Q6UXC1 1216 aa8.41□□□□□ -1.06
GYPB-206ENST00000506516 MICU3Q86XE3 530 aa8.41□□□□□ -1.06
GYPB-206ENST00000506516 SAMD3Q8N6K7 520 aa8.41□□□□□ -1.06
GYPB-206ENST00000506516 FAM133AQ8N9E0 248 aa8.41□□□□□ -1.06
GYPB-206ENST00000506516 U2AF1L4Q8WU68 220 aaKnown RBP8.41□□□□□ -1.06
GYPB-206ENST00000506516 CLEC4DQ8WXI8 215 aa8.41□□□□□ -1.06
GYPB-206ENST00000506516 BRF1Q92994 677 aa8.41□□□□□ -1.06
GYPB-206ENST00000506516 PIGSQ96S52 555 aa8.41□□□□□ -1.06
GYPB-206ENST00000506516 SPZ1Q9BXG8 430 aa8.41□□□□□ -1.06
GYPB-206ENST00000506516 MAP3K20Q9NYL2 800 aaKnown RBP8.41□□□□□ -1.06
GYPB-206ENST00000506516 PCDHA1Q9Y5I3 950 aa8.41□□□□□ -1.06
GYPB-206ENST00000506516 LOC102724159A0A0B4J2E5 919 aa8.4□□□□□ -1.06
GYPB-206ENST00000506516 C3orf80F5H4A9 247 aa8.4□□□□□ -1.06
GYPB-206ENST00000506516 NFIBO00712 420 aa8.4□□□□□ -1.06
GYPB-206ENST00000506516 CYTH3O43739 400 aa8.4□□□□□ -1.06
GYPB-206ENST00000506516 IGHA2P01877 340 aa8.4□□□□□ -1.06
GYPB-206ENST00000506516 CALML3P27482 149 aa8.4□□□□□ -1.06
GYPB-206ENST00000506516 CCND3P30281 292 aaPredicted RBP8.4□□□□□ -1.06
GYPB-206ENST00000506516 METAP2P50579 478 aaKnown RBP eCLIP8.4□□□□□ -1.06
GYPB-206ENST00000506516 RPS6P62753 249 aaKnown RBP8.4□□□□□ -1.06
GYPB-206ENST00000506516 CNTN2Q02246 1040 aa8.4□□□□□ -1.06
GYPB-206ENST00000506516 APOBRQ0VD83 1088 aa8.4□□□□□ -1.06
GYPB-206ENST00000506516 PWP2Q15269 919 aaKnown RBP8.4□□□□□ -1.06
GYPB-206ENST00000506516 RTN1Q16799 776 aa8.4□□□□□ -1.06
GYPB-206ENST00000506516 PRAMEF19Q5SWL8 479 aa8.4□□□□□ -1.06
GYPB-206ENST00000506516 RAB11FIP4Q86YS3 637 aa8.4□□□□□ -1.06
GYPB-206ENST00000506516 CCDC82Q8N4S0 544 aa8.4□□□□□ -1.06
GYPB-206ENST00000506516 SRBD1Q8N5C6 995 aaKnown RBP8.4□□□□□ -1.06
GYPB-206ENST00000506516 DNERQ8NFT8 737 aa8.4□□□□□ -1.06
GYPB-206ENST00000506516 PIBF1Q8WXW3 757 aa8.4□□□□□ -1.06
GYPB-206ENST00000506516 AGXT2Q9BYV1 514 aa8.4□□□□□ -1.06
GYPB-206ENST00000506516 ABHD16BQ9H3Z7 469 aa8.4□□□□□ -1.06
GYPB-206ENST00000506516 UPF2Q9HAU5 1272 aaKnown RBP8.4□□□□□ -1.06
GYPB-206ENST00000506516 PDRG1Q9NUG6 133 aa8.4□□□□□ -1.06
GYPB-206ENST00000506516 DDX20Q9UHI6 824 aaKnown RBP8.4□□□□□ -1.06
GYPB-206ENST00000506516 BRPF3Q9ULD4 1205 aa8.4□□□□□ -1.06
GYPB-206ENST00000506516 RCCD1A6NED2 376 aa8.39□□□□□ -1.07
GYPB-206ENST00000506516 SOWAHBA6NEL2 793 aa8.39□□□□□ -1.07
GYPB-206ENST00000506516 GOLGA8AA7E2F4 631 aa8.39□□□□□ -1.07
GYPB-206ENST00000506516 GOLGA8BA8MQT2 603 aa8.39□□□□□ -1.07
GYPB-206ENST00000506516 SEPT4O43236 478 aa8.39□□□□□ -1.07
GYPB-206ENST00000506516 PLEKHA8P1O95397 391 aa8.39□□□□□ -1.07
GYPB-206ENST00000506516 CFBP00751 764 aa8.39□□□□□ -1.07
GYPB-206ENST00000506516 CYBAP13498 195 aa8.39□□□□□ -1.07
GYPB-206ENST00000506516 MLLT1Q03111 559 aaPredicted RBP8.39□□□□□ -1.07
GYPB-206ENST00000506516 ACVR2BQ13705 512 aa8.39□□□□□ -1.07
GYPB-206ENST00000506516 ANKRD1Q15327 319 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms