RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 BFSP2Q13515 415 aa9.7□□□□□ -0.86
SNF8-204ENST00000506104 FAM117BQ6P1L5 589 aa9.7□□□□□ -0.86
SNF8-204ENST00000506104 TMCO2Q7Z6W1 182 aaPredicted RBP9.7□□□□□ -0.86
SNF8-204ENST00000506104 PI4K2BQ8TCG2 481 aa9.7□□□□□ -0.86
SNF8-204ENST00000506104 RILPL2Q969X0 211 aa9.7□□□□□ -0.86
SNF8-204ENST00000506104 TMEM47Q9BQJ4 181 aa9.7□□□□□ -0.86
SNF8-204ENST00000506104 ZKSCAN3Q9BRR0 538 aa9.7□□□□□ -0.86
SNF8-204ENST00000506104 ALG1Q9BT22 464 aa9.7□□□□□ -0.86
SNF8-204ENST00000506104 RANBP17Q9H2T7 1088 aaKnown RBP9.7□□□□□ -0.86
SNF8-204ENST00000506104 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.7□□□□□ -0.86
SNF8-204ENST00000506104 PLA2G6O60733 806 aa9.69□□□□□ -0.86
SNF8-204ENST00000506104 PFKMP08237 780 aa9.69□□□□□ -0.86
SNF8-204ENST00000506104 COL4A4P53420 1690 aaPredicted RBP9.69□□□□□ -0.86
SNF8-204ENST00000506104 RPS6P62753 249 aaKnown RBP9.69□□□□□ -0.86
SNF8-204ENST00000506104 NKX3-2P78367 333 aa9.69□□□□□ -0.86
SNF8-204ENST00000506104 PTGISQ16647 500 aa9.69□□□□□ -0.86
SNF8-204ENST00000506104 KIAA1217Q5T5P2 1943 aa9.69□□□□□ -0.86
SNF8-204ENST00000506104 EP400NLQ6ZTU2 488 aa9.69□□□□□ -0.86
SNF8-204ENST00000506104 CCDC155Q8N6L0 562 aa9.69□□□□□ -0.86
SNF8-204ENST00000506104 SCFD2Q8WU76 684 aa9.69□□□□□ -0.86
SNF8-204ENST00000506104 BBXQ8WY36 941 aaPredicted RBP9.69□□□□□ -0.86
SNF8-204ENST00000506104 SLC9A7Q96T83 725 aa9.69□□□□□ -0.86
SNF8-204ENST00000506104 UBA5Q9GZZ9 404 aa9.69□□□□□ -0.86
SNF8-204ENST00000506104 CPVLQ9H3G5 476 aa9.69□□□□□ -0.86
SNF8-204ENST00000506104 VAT1LQ9HCJ6 419 aa9.69□□□□□ -0.86
SNF8-204ENST00000506104 SCN10AQ9Y5Y9 1956 aa9.68□□□□□ -0.86
SNF8-204ENST00000506104 PTPRSQ13332 1948 aa9.68□□□□□ -0.86
SNF8-204ENST00000506104 EPOPA6NHQ4 379 aa9.68□□□□□ -0.86
SNF8-204ENST00000506104 RBAK-RBAKDNI3L0D1 243 aa9.68□□□□□ -0.86
SNF8-204ENST00000506104 IQCF3P0C7M6 154 aa9.68□□□□□ -0.86
SNF8-204ENST00000506104 RFC2P35250 354 aa9.68□□□□□ -0.86
SNF8-204ENST00000506104 MFSD6Q6ZSS7 791 aa9.68□□□□□ -0.86
SNF8-204ENST00000506104 HERC6Q8IVU3 1022 aa9.68□□□□□ -0.86
SNF8-204ENST00000506104 GDPD5Q8WTR4 605 aa9.68□□□□□ -0.86
SNF8-204ENST00000506104 AFG1LQ8WV93 481 aa9.68□□□□□ -0.86
SNF8-204ENST00000506104 EVI5LQ96CN4 794 aa9.68□□□□□ -0.86
SNF8-204ENST00000506104 FAM227BQ96M60 508 aa9.68□□□□□ -0.86
SNF8-204ENST00000506104 PCDHB15Q9Y5E8 787 aa9.68□□□□□ -0.86
SNF8-204ENST00000506104 MTCH2Q9Y6C9 303 aa9.68□□□□□ -0.86
SNF8-204ENST00000506104 U3KPZ7 1027 aaPredicted RBP9.68□□□□□ -0.86
SNF8-204ENST00000506104 TTC28Q96AY4 2481 aa9.68□□□□□ -0.86
SNF8-204ENST00000506104 NKRFO15226 690 aaKnown RBP eCLIP9.67□□□□□ -0.86
SNF8-204ENST00000506104 ORC4O43929 436 aa9.67□□□□□ -0.86
SNF8-204ENST00000506104 KPNA6O60684 536 aa9.67□□□□□ -0.86
SNF8-204ENST00000506104 FGAP02671 866 aa9.67□□□□□ -0.86
SNF8-204ENST00000506104 PDHBP11177 359 aa9.67□□□□□ -0.86
SNF8-204ENST00000506104 BMP1P13497 986 aa9.67□□□□□ -0.86
SNF8-204ENST00000506104 TAP1Q03518 808 aa9.67□□□□□ -0.86
SNF8-204ENST00000506104 NMIQ13287 307 aaPredicted RBP9.67□□□□□ -0.86
SNF8-204ENST00000506104 GRB10Q13322 594 aa9.67□□□□□ -0.86
SNF8-204ENST00000506104 LY6KQ17RY6 165 aa9.67□□□□□ -0.86
SNF8-204ENST00000506104 MCMDC2Q4G0Z9 681 aa9.67□□□□□ -0.86
SNF8-204ENST00000506104 NFRKBQ6P4R8 1299 aa9.67□□□□□ -0.86
SNF8-204ENST00000506104 IFNLR1Q8IU57 520 aaPredicted RBP9.67□□□□□ -0.86
SNF8-204ENST00000506104 CLEC4DQ8WXI8 215 aa9.67□□□□□ -0.86
SNF8-204ENST00000506104 HLA-CQ95604 372 aa9.67□□□□□ -0.86
SNF8-204ENST00000506104 C1QTNF1Q9BXJ1 281 aa9.67□□□□□ -0.86
SNF8-204ENST00000506104 HELLSQ9NRZ9 838 aa9.67□□□□□ -0.86
SNF8-204ENST00000506104 PRUNE2Q8WUY3 3088 aa9.67□□□□□ -0.86
SNF8-204ENST00000506104 A0A0D9SFI3 127 aa9.66□□□□□ -0.86
SNF8-204ENST00000506104 FAM86C2PA6NEL3 165 aa9.66□□□□□ -0.86
SNF8-204ENST00000506104 FOXP2O15409 715 aa9.66□□□□□ -0.86
SNF8-204ENST00000506104 ARHGEF15O94989 841 aa9.66□□□□□ -0.86
SNF8-204ENST00000506104 ARIH2O95376 493 aa9.66□□□□□ -0.86
SNF8-204ENST00000506104 GH1P01241 217 aa9.66□□□□□ -0.86
SNF8-204ENST00000506104 MYCLP12524 364 aaPredicted RBP9.66□□□□□ -0.86
SNF8-204ENST00000506104 EIF2AK2P19525 551 aaKnown RBP9.66□□□□□ -0.86
SNF8-204ENST00000506104 ZNF543Q08ER8 600 aa9.66□□□□□ -0.86
SNF8-204ENST00000506104 CDC37Q16543 378 aaPredicted RBP9.66□□□□□ -0.86
SNF8-204ENST00000506104 ARHGEF16Q5VV41 709 aa9.66□□□□□ -0.86
SNF8-204ENST00000506104 GDF6Q6KF10 455 aaPredicted RBP9.66□□□□□ -0.86
SNF8-204ENST00000506104 BTNL9Q6UXG8 535 aa9.66□□□□□ -0.86
SNF8-204ENST00000506104 SPRED2Q7Z698 418 aa9.66□□□□□ -0.86
SNF8-204ENST00000506104 DHX37Q8IY37 1157 aaKnown RBP9.66□□□□□ -0.86
SNF8-204ENST00000506104 C7orf31Q8N865 590 aa9.66□□□□□ -0.86
SNF8-204ENST00000506104 MORC4Q8TE76 937 aa9.66□□□□□ -0.86
SNF8-204ENST00000506104 TBC1D5Q92609 795 aa9.66□□□□□ -0.86
SNF8-204ENST00000506104 TAAR1Q96RJ0 339 aa9.66□□□□□ -0.86
SNF8-204ENST00000506104 EPHX3Q9H6B9 360 aa9.66□□□□□ -0.86
SNF8-204ENST00000506104 KAT14Q9H8E8 782 aa9.66□□□□□ -0.86
SNF8-204ENST00000506104 ANAPC4Q9UJX5 808 aa9.66□□□□□ -0.86
SNF8-204ENST00000506104 PNMA2Q9UL42 364 aa9.66□□□□□ -0.86
SNF8-204ENST00000506104 HCN4Q9Y3Q4 1203 aa9.66□□□□□ -0.86
SNF8-204ENST00000506104 RBM47A0AV96 593 aaKnown RBP9.65□□□□□ -0.86
SNF8-204ENST00000506104 LCHNA4D1U4 455 aa9.65□□□□□ -0.86
SNF8-204ENST00000506104 CFBP00751 764 aa9.65□□□□□ -0.86
SNF8-204ENST00000506104 MMP3P08254 477 aa9.65□□□□□ -0.86
SNF8-204ENST00000506104 ZNF286BP0CG31 522 aa9.65□□□□□ -0.86
SNF8-204ENST00000506104 HSPD1P10809 573 aaKnown RBP9.65□□□□□ -0.86
SNF8-204ENST00000506104 CASTP20810 708 aaKnown RBP9.65□□□□□ -0.86
SNF8-204ENST00000506104 SSTR3P32745 418 aaPredicted RBP9.65□□□□□ -0.86
SNF8-204ENST00000506104 PLA2G5P39877 138 aa9.65□□□□□ -0.86
SNF8-204ENST00000506104 DEFB103AP81534 67 aa9.65□□□□□ -0.86
SNF8-204ENST00000506104 PTPN11Q06124 597 aaPredicted RBP9.65□□□□□ -0.86
SNF8-204ENST00000506104 B4GALNT3Q6L9W6 998 aa9.65□□□□□ -0.86
SNF8-204ENST00000506104 LRRC8DQ7L1W4 858 aa9.65□□□□□ -0.86
SNF8-204ENST00000506104 DNERQ8NFT8 737 aa9.65□□□□□ -0.86
SNF8-204ENST00000506104 PHOSPHO2Q8TCD6 241 aa9.65□□□□□ -0.86
SNF8-204ENST00000506104 ESR2Q92731 530 aa9.65□□□□□ -0.86
SNF8-204ENST00000506104 VWCEQ96DN2 955 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms