RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 PDE4DQ08499 809 aa20.87■□□□□ 0.93
DDR1-254ENST00000504679 TRIM32Q13049 653 aa20.87■□□□□ 0.93
DDR1-254ENST00000504679 MCTP2Q6DN12 878 aa20.87■□□□□ 0.93
DDR1-254ENST00000504679 ARMCX2Q7L311 632 aa20.87■□□□□ 0.93
DDR1-254ENST00000504679 FAM184AQ8NB25 1140 aa20.87■□□□□ 0.93
DDR1-254ENST00000504679 ZNF333Q96JL9 665 aa20.87■□□□□ 0.93
DDR1-254ENST00000504679 AIFM3Q96NN9 605 aa20.87■□□□□ 0.93
DDR1-254ENST00000504679 ABHD16BQ9H3Z7 469 aa20.87■□□□□ 0.93
DDR1-254ENST00000504679 PXMP2Q9NR77 195 aa20.87■□□□□ 0.93
DDR1-254ENST00000504679 NRBP1Q9UHY1 535 aa20.87■□□□□ 0.93
DDR1-254ENST00000504679 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.87■□□□□ 0.93
DDR1-254ENST00000504679 SPDYE3A6NKU9 549 aa20.86■□□□□ 0.93
DDR1-254ENST00000504679 SNAI1O95863 264 aaPredicted RBP20.86■□□□□ 0.93
DDR1-254ENST00000504679 UBE2SQ16763 222 aa20.86■□□□□ 0.93
DDR1-254ENST00000504679 PRAMEF19Q5SWL8 479 aa20.86■□□□□ 0.93
DDR1-254ENST00000504679 MAP3K21Q5TCX8 1036 aa20.86■□□□□ 0.93
DDR1-254ENST00000504679 GALNT17Q6IS24 598 aa20.86■□□□□ 0.93
DDR1-254ENST00000504679 MORC4Q8TE76 937 aa20.86■□□□□ 0.93
DDR1-254ENST00000504679 EHMT1Q9H9B1 1298 aa20.86■□□□□ 0.93
DDR1-254ENST00000504679 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.86■□□□□ 0.93
DDR1-254ENST00000504679 RBBP6Q7Z6E9 1792 aaKnown RBP20.86■□□□□ 0.93
DDR1-254ENST00000504679 ASTN1O14525 1302 aa20.85■□□□□ 0.93
DDR1-254ENST00000504679 MYCP01106 439 aaPredicted RBP20.85■□□□□ 0.93
DDR1-254ENST00000504679 CNGA1P29973 690 aa20.85■□□□□ 0.93
DDR1-254ENST00000504679 TRIM29Q14134 588 aa20.85■□□□□ 0.93
DDR1-254ENST00000504679 STXBP2Q15833 593 aa20.85■□□□□ 0.93
DDR1-254ENST00000504679 TMEM106CQ9BVX2 250 aa20.85■□□□□ 0.93
DDR1-254ENST00000504679 RNF208Q9H0X6 261 aa20.85■□□□□ 0.93
DDR1-254ENST00000504679 PCDHA6Q9UN73 950 aa20.85■□□□□ 0.93
DDR1-254ENST00000504679 KIF3AQ9Y496 699 aa20.85■□□□□ 0.93
DDR1-254ENST00000504679 PCDHA8Q9Y5H6 950 aa20.85■□□□□ 0.93
DDR1-254ENST00000504679 HTTP42858 3142 aa20.84■□□□□ 0.93
DDR1-254ENST00000504679 K7ELQ4 463 aaPredicted RBP20.84■□□□□ 0.93
DDR1-254ENST00000504679 NR3C2P08235 984 aa20.84■□□□□ 0.93
DDR1-254ENST00000504679 CCL5P13501 91 aa20.84■□□□□ 0.93
DDR1-254ENST00000504679 EIF2AK2P19525 551 aaKnown RBP20.84■□□□□ 0.93
DDR1-254ENST00000504679 ACVR2BQ13705 512 aa20.84■□□□□ 0.93
DDR1-254ENST00000504679 MTFR1Q15390 333 aa20.84■□□□□ 0.93
DDR1-254ENST00000504679 HSCBQ8IWL3 235 aa20.84■□□□□ 0.93
DDR1-254ENST00000504679 ABHD8Q96I13 439 aa20.84■□□□□ 0.93
DDR1-254ENST00000504679 PDCD2LQ9BRP1 358 aa20.84■□□□□ 0.93
DDR1-254ENST00000504679 PCDHA4Q9UN74 947 aa20.84■□□□□ 0.93
DDR1-254ENST00000504679 CENPFP49454 3210 aa20.83■□□□□ 0.93
DDR1-254ENST00000504679 EIF3JO75822 258 aaKnown RBP20.83■□□□□ 0.93
DDR1-254ENST00000504679 MYCLP12524 364 aaPredicted RBP20.83■□□□□ 0.93
DDR1-254ENST00000504679 CYBAP13498 195 aa20.83■□□□□ 0.93
DDR1-254ENST00000504679 EDNRBP24530 442 aa20.83■□□□□ 0.93
DDR1-254ENST00000504679 CLK2P49760 499 aaKnown RBP20.83■□□□□ 0.93
DDR1-254ENST00000504679 AP3B2Q13367 1082 aa20.83■□□□□ 0.93
DDR1-254ENST00000504679 CUL4AQ13619 759 aa20.83■□□□□ 0.93
DDR1-254ENST00000504679 PGM5Q15124 567 aa20.83■□□□□ 0.93
DDR1-254ENST00000504679 REXO1Q8N1G1 1221 aaKnown RBP20.83■□□□□ 0.93
DDR1-254ENST00000504679 PHF20Q9BVI0 1012 aa20.83■□□□□ 0.93
DDR1-254ENST00000504679 UNC93B1Q9H1C4 597 aa20.83■□□□□ 0.93
DDR1-254ENST00000504679 KCNJ14Q9UNX9 436 aa20.83■□□□□ 0.93
DDR1-254ENST00000504679 SMC3Q9UQE7 1217 aa20.83■□□□□ 0.93
DDR1-254ENST00000504679 LCTP09848 1927 aa20.82■□□□□ 0.92
DDR1-254ENST00000504679 CCND2P30279 289 aa20.82■□□□□ 0.92
DDR1-254ENST00000504679 CCND3P30281 292 aaPredicted RBP20.82■□□□□ 0.92
DDR1-254ENST00000504679 JAKMIP3Q5VZ66 844 aa20.82■□□□□ 0.92
DDR1-254ENST00000504679 EEPD1Q7L9B9 569 aa20.82■□□□□ 0.92
DDR1-254ENST00000504679 VSIG10LQ86VR7 867 aa20.82■□□□□ 0.92
DDR1-254ENST00000504679 BLIDQ8IZY5 108 aa20.82■□□□□ 0.92
DDR1-254ENST00000504679 TRPV1Q8NER1 839 aa20.82■□□□□ 0.92
DDR1-254ENST00000504679 SHISA4Q96DD7 197 aa20.82■□□□□ 0.92
DDR1-254ENST00000504679 VTA1Q9NP79 307 aa20.82■□□□□ 0.92
DDR1-254ENST00000504679 ZHX1Q9UKY1 873 aaPredicted RBP20.82■□□□□ 0.92
DDR1-254ENST00000504679 MCM3APO60318 1980 aa20.81■□□□□ 0.92
DDR1-254ENST00000504679 ZNF865P0CJ78 1059 aaPredicted RBP20.81■□□□□ 0.92
DDR1-254ENST00000504679 IQSEC1Q6DN90 963 aa20.81■□□□□ 0.92
DDR1-254ENST00000504679 XRRA1Q6P2D8 792 aa20.81■□□□□ 0.92
DDR1-254ENST00000504679 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.81■□□□□ 0.92
DDR1-254ENST00000504679 TMEM260Q9NX78 707 aa20.81■□□□□ 0.92
DDR1-254ENST00000504679 FAM184BQ9ULE4 1060 aa20.81■□□□□ 0.92
DDR1-254ENST00000504679 DDX49Q9Y6V7 483 aaKnown RBP20.81■□□□□ 0.92
DDR1-254ENST00000504679 SEPT4O43236 478 aa20.8■□□□□ 0.92
DDR1-254ENST00000504679 MSCO60682 206 aa20.8■□□□□ 0.92
DDR1-254ENST00000504679 STAM2O75886 525 aa20.8■□□□□ 0.92
DDR1-254ENST00000504679 CCDC144BQ3MJ40 725 aa20.8■□□□□ 0.92
DDR1-254ENST00000504679 DAGLBQ8NCG7 672 aa20.8■□□□□ 0.92
DDR1-254ENST00000504679 C8orf76Q96K31 380 aa20.8■□□□□ 0.92
DDR1-254ENST00000504679 KATNBL1Q9H079 304 aa20.8■□□□□ 0.92
DDR1-254ENST00000504679 BRMS1Q9HCU9 246 aa20.8■□□□□ 0.92
DDR1-254ENST00000504679 GJB4Q9NTQ9 266 aa20.8■□□□□ 0.92
DDR1-254ENST00000504679 FRMPD4Q14CM0 1322 aa20.79■□□□□ 0.92
DDR1-254ENST00000504679 AKR1A1P14550 325 aa20.79■□□□□ 0.92
DDR1-254ENST00000504679 GJB2P29033 226 aa20.79■□□□□ 0.92
DDR1-254ENST00000504679 SAFBQ15424 915 aaKnown RBP eCLIP20.79■□□□□ 0.92
DDR1-254ENST00000504679 PCNX4Q63HM2 1172 aa20.79■□□□□ 0.92
DDR1-254ENST00000504679 KRT40Q6A162 431 aa20.79■□□□□ 0.92
DDR1-254ENST00000504679 TAPT1Q6NXT6 567 aa20.79■□□□□ 0.92
DDR1-254ENST00000504679 INTS4Q96HW7 963 aaKnown RBP20.79■□□□□ 0.92
DDR1-254ENST00000504679 ANO3Q9BYT9 981 aa20.79■□□□□ 0.92
DDR1-254ENST00000504679 PAK6Q9NQU5 681 aaPredicted RBP20.79■□□□□ 0.92
DDR1-254ENST00000504679 CCDC85CA6NKD9 419 aa20.78■□□□□ 0.92
DDR1-254ENST00000504679 ADAMTS3O15072 1205 aa20.78■□□□□ 0.92
DDR1-254ENST00000504679 GJB1P08034 283 aa20.78■□□□□ 0.92
DDR1-254ENST00000504679 CAPN2P17655 700 aa20.78■□□□□ 0.92
DDR1-254ENST00000504679 FOSBP53539 338 aa20.78■□□□□ 0.92
DDR1-254ENST00000504679 SEPT14Q6ZU15 432 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms