RNA–Protein interactions for RNA: ENST00000502724.5

PRDM2-211, Transcript of PR/SET domain 2, humanhuman

TSL 4

Gene PRDM2, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-211ENST00000502724 RMDN3Q96TC7 470 aa11.7□□□□□ -0.54
PRDM2-211ENST00000502724 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.7□□□□□ -0.54
PRDM2-211ENST00000502724 VTA1Q9NP79 307 aa11.7□□□□□ -0.54
PRDM2-211ENST00000502724 RIC8AQ9NPQ8 531 aa11.7□□□□□ -0.54
PRDM2-211ENST00000502724 PAK6Q9NQU5 681 aaPredicted RBP11.7□□□□□ -0.54
PRDM2-211ENST00000502724 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.7□□□□□ -0.54
PRDM2-211ENST00000502724 FLRT1Q9NZU1 646 aa11.7□□□□□ -0.54
PRDM2-211ENST00000502724 LCTP09848 1927 aa11.69□□□□□ -0.54
PRDM2-211ENST00000502724 SOWAHBA6NEL2 793 aa11.69□□□□□ -0.54
PRDM2-211ENST00000502724 SMCO2A6NFE2 343 aa11.69□□□□□ -0.54
PRDM2-211ENST00000502724 CCDC85CA6NKD9 419 aa11.69□□□□□ -0.54
PRDM2-211ENST00000502724 STXBP3O00186 592 aa11.69□□□□□ -0.54
PRDM2-211ENST00000502724 CYP2C19P33261 490 aa11.69□□□□□ -0.54
PRDM2-211ENST00000502724 STXBP2Q15833 593 aa11.69□□□□□ -0.54
PRDM2-211ENST00000502724 NOL8Q76FK4 1167 aaKnown RBP11.69□□□□□ -0.54
PRDM2-211ENST00000502724 GPKOWQ92917 476 aaPredicted RBP eCLIP11.69□□□□□ -0.54
PRDM2-211ENST00000502724 LARP6Q9BRS8 491 aaKnown RBP11.69□□□□□ -0.54
PRDM2-211ENST00000502724 ZMYND12Q9H0C1 365 aa11.69□□□□□ -0.54
PRDM2-211ENST00000502724 FAM184BQ9ULE4 1060 aa11.69□□□□□ -0.54
PRDM2-211ENST00000502724 HTTP42858 3142 aa11.68□□□□□ -0.54
PRDM2-211ENST00000502724 hCG_1642624A0A1W2PR95 340 aa11.68□□□□□ -0.54
PRDM2-211ENST00000502724 OPLAHO14841 1288 aa11.68□□□□□ -0.54
PRDM2-211ENST00000502724 EIF3JO75822 258 aaKnown RBP11.68□□□□□ -0.54
PRDM2-211ENST00000502724 EDNRBP24530 442 aa11.68□□□□□ -0.54
PRDM2-211ENST00000502724 CNGA1P29973 690 aa11.68□□□□□ -0.54
PRDM2-211ENST00000502724 CCND2P30279 289 aa11.68□□□□□ -0.54
PRDM2-211ENST00000502724 GJA8P48165 433 aa11.68□□□□□ -0.54
PRDM2-211ENST00000502724 ACVR2BQ13705 512 aa11.68□□□□□ -0.54
PRDM2-211ENST00000502724 TRIM29Q14134 588 aa11.68□□□□□ -0.54
PRDM2-211ENST00000502724 PKN1Q16512 942 aa11.68□□□□□ -0.54
PRDM2-211ENST00000502724 GNPTABQ3T906 1256 aa11.68□□□□□ -0.54
PRDM2-211ENST00000502724 KCNV1Q6PIU1 500 aa11.68□□□□□ -0.54
PRDM2-211ENST00000502724 ANKLE1Q8NAG6 615 aa11.68□□□□□ -0.54
PRDM2-211ENST00000502724 UNC93B1Q9H1C4 597 aa11.68□□□□□ -0.54
PRDM2-211ENST00000502724 SPC25Q9HBM1 224 aa11.68□□□□□ -0.54
PRDM2-211ENST00000502724 BRMS1Q9HCU9 246 aa11.68□□□□□ -0.54
PRDM2-211ENST00000502724 PXMP2Q9NR77 195 aa11.68□□□□□ -0.54
PRDM2-211ENST00000502724 DDX20Q9UHI6 824 aaKnown RBP11.68□□□□□ -0.54
PRDM2-211ENST00000502724 ZHX1Q9UKY1 873 aaPredicted RBP11.68□□□□□ -0.54
PRDM2-211ENST00000502724 MCM3APO60318 1980 aa11.68□□□□□ -0.54
PRDM2-211ENST00000502724 KIAA0100Q14667 2235 aaKnown RBP11.67□□□□□ -0.54
PRDM2-211ENST00000502724 FRMPD4Q14CM0 1322 aa11.67□□□□□ -0.54
PRDM2-211ENST00000502724 MEIS2O14770 477 aa11.67□□□□□ -0.54
PRDM2-211ENST00000502724 NKRFO15226 690 aaKnown RBP eCLIP11.67□□□□□ -0.544e-6■■□□□ 14.1
PRDM2-211ENST00000502724 SGPL1O95470 568 aa11.67□□□□□ -0.54
PRDM2-211ENST00000502724 SNAI1O95863 264 aaPredicted RBP11.67□□□□□ -0.54
PRDM2-211ENST00000502724 NR3C2P08235 984 aa11.67□□□□□ -0.54
PRDM2-211ENST00000502724 RARBP10826 455 aa11.67□□□□□ -0.54
PRDM2-211ENST00000502724 TAL1P17542 331 aaPredicted RBP11.67□□□□□ -0.54
PRDM2-211ENST00000502724 HOXA13P31271 388 aaPredicted RBP11.67□□□□□ -0.54
PRDM2-211ENST00000502724 MTFR1Q15390 333 aa11.67□□□□□ -0.54
PRDM2-211ENST00000502724 IQSEC1Q6DN90 963 aa11.67□□□□□ -0.54
PRDM2-211ENST00000502724 FCHSD1Q86WN1 690 aa11.67□□□□□ -0.54
PRDM2-211ENST00000502724 REXO1Q8N1G1 1221 aaKnown RBP11.67□□□□□ -0.54
PRDM2-211ENST00000502724 U2AF1L4Q8WU68 220 aaKnown RBP11.67□□□□□ -0.54
PRDM2-211ENST00000502724 SCFD2Q8WU76 684 aa11.67□□□□□ -0.54
PRDM2-211ENST00000502724 FGD4Q96M96 766 aa11.67□□□□□ -0.54
PRDM2-211ENST00000502724 TAAR1Q96RJ0 339 aa11.67□□□□□ -0.54
PRDM2-211ENST00000502724 PDCD2LQ9BRP1 358 aa11.67□□□□□ -0.54
PRDM2-211ENST00000502724 ORC3Q9UBD5 711 aaPredicted RBP11.67□□□□□ -0.54
PRDM2-211ENST00000502724 Q9Y3F1 56 aa11.67□□□□□ -0.54
PRDM2-211ENST00000502724 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.67□□□□□ -0.54
PRDM2-211ENST00000502724 ZNF865P0CJ78 1059 aaPredicted RBP11.66□□□□□ -0.54
PRDM2-211ENST00000502724 EIF2AK2P19525 551 aaKnown RBP11.66□□□□□ -0.54
PRDM2-211ENST00000502724 CCND3P30281 292 aaPredicted RBP11.66□□□□□ -0.54
PRDM2-211ENST00000502724 NLRP5P59047 1200 aa11.66□□□□□ -0.54
PRDM2-211ENST00000502724 TRIM32Q13049 653 aa11.66□□□□□ -0.54
PRDM2-211ENST00000502724 TTLL4Q14679 1199 aa11.66□□□□□ -0.54
PRDM2-211ENST00000502724 PGM5Q15124 567 aa11.66□□□□□ -0.54
PRDM2-211ENST00000502724 USP17L6PQ6QN14 398 aa11.66□□□□□ -0.54
PRDM2-211ENST00000502724 NECAB1Q8N987 351 aa11.66□□□□□ -0.54
PRDM2-211ENST00000502724 FAM184AQ8NB25 1140 aa11.66□□□□□ -0.54
PRDM2-211ENST00000502724 DAGLBQ8NCG7 672 aa11.66□□□□□ -0.54
PRDM2-211ENST00000502724 ARRDC4Q8NCT1 418 aa11.66□□□□□ -0.54
PRDM2-211ENST00000502724 NSUN7Q8NE18 718 aaKnown RBP11.66□□□□□ -0.54
PRDM2-211ENST00000502724 TBC1D5Q92609 795 aa11.66□□□□□ -0.54
PRDM2-211ENST00000502724 CDHR1Q96JP9 859 aa11.66□□□□□ -0.54
PRDM2-211ENST00000502724 DEFB118Q96PH6 123 aa11.66□□□□□ -0.54
PRDM2-211ENST00000502724 LRRC37A2A6NM11 1700 aa11.66□□□□□ -0.54
PRDM2-211ENST00000502724 KIAA1217Q5T5P2 1943 aa11.65□□□□□ -0.54
PRDM2-211ENST00000502724 RBM47A0AV96 593 aaKnown RBP11.65□□□□□ -0.54
PRDM2-211ENST00000502724 MAFGO15525 162 aa11.65□□□□□ -0.54
PRDM2-211ENST00000502724 DUSP11O75319 330 aaKnown RBP11.65□□□□□ -0.54
PRDM2-211ENST00000502724 LARGE1O95461 756 aa11.65□□□□□ -0.54
PRDM2-211ENST00000502724 TFRCP02786 760 aaKnown RBP11.65□□□□□ -0.54
PRDM2-211ENST00000502724 TGFB3P10600 412 aa11.65□□□□□ -0.54
PRDM2-211ENST00000502724 TNFAIP2Q03169 654 aa11.65□□□□□ -0.54
PRDM2-211ENST00000502724 CCDC144BQ3MJ40 725 aa11.65□□□□□ -0.54
PRDM2-211ENST00000502724 BRDTQ58F21 947 aaPredicted RBP11.65□□□□□ -0.54
PRDM2-211ENST00000502724 PCNX4Q63HM2 1172 aa11.65□□□□□ -0.54
PRDM2-211ENST00000502724 RNF180Q86T96 592 aa11.65□□□□□ -0.54
PRDM2-211ENST00000502724 NLRX1Q86UT6 975 aa11.65□□□□□ -0.54
PRDM2-211ENST00000502724 VSIG10LQ86VR7 867 aa11.65□□□□□ -0.54
PRDM2-211ENST00000502724 CCDC83Q8IWF9 413 aa11.65□□□□□ -0.54
PRDM2-211ENST00000502724 ALG1Q9BT22 464 aa11.65□□□□□ -0.54
PRDM2-211ENST00000502724 CRISPLD2Q9H0B8 497 aa11.65□□□□□ -0.54
PRDM2-211ENST00000502724 COL20A1Q9P218 1284 aa11.65□□□□□ -0.54
PRDM2-211ENST00000502724 OGDHLQ9ULD0 1010 aa11.65□□□□□ -0.54
PRDM2-211ENST00000502724 PCDHA6Q9UN73 950 aa11.65□□□□□ -0.54
PRDM2-211ENST00000502724 PCDHA4Q9UN74 947 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms