RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 AAK1Q2M2I8 961 aa17.27■□□□□ 0.36
SEC61A1-207ENST00000498837 RRP12Q5JTH9 1297 aaKnown RBP17.27■□□□□ 0.36
SEC61A1-207ENST00000498837 NFRKBQ6P4R8 1299 aa17.27■□□□□ 0.36
SEC61A1-207ENST00000498837 RETREG2Q8NC44 543 aa17.27■□□□□ 0.36
SEC61A1-207ENST00000498837 SLC9A7Q96T83 725 aa17.27■□□□□ 0.36
SEC61A1-207ENST00000498837 FTOQ9C0B1 505 aaKnown RBP eCLIP17.27■□□□□ 0.36
SEC61A1-207ENST00000498837 SALL3Q9BXA9 1300 aa17.26■□□□□ 0.35
SEC61A1-207ENST00000498837 NKRFO15226 690 aaKnown RBP eCLIP17.26■□□□□ 0.35
SEC61A1-207ENST00000498837 RFC2P35250 354 aa17.26■□□□□ 0.35
SEC61A1-207ENST00000498837 ALX1Q15699 326 aa17.26■□□□□ 0.35
SEC61A1-207ENST00000498837 BRDTQ58F21 947 aaPredicted RBP17.26■□□□□ 0.35
SEC61A1-207ENST00000498837 SPRED2Q7Z698 418 aa17.26■□□□□ 0.35
SEC61A1-207ENST00000498837 PHOSPHO2Q8TCD6 241 aa17.26■□□□□ 0.35
SEC61A1-207ENST00000498837 SCFD2Q8WU76 684 aa17.26■□□□□ 0.35
SEC61A1-207ENST00000498837 ARNTL2Q8WYA1 636 aa17.26■□□□□ 0.35
SEC61A1-207ENST00000498837 SIP14410 1827 aa17.26■□□□□ 0.35
SEC61A1-207ENST00000498837 PITPNM1O00562 1244 aa17.25■□□□□ 0.35
SEC61A1-207ENST00000498837 ARIH2O95376 493 aa17.25■□□□□ 0.35
SEC61A1-207ENST00000498837 FGAP02671 866 aa17.25■□□□□ 0.35
SEC61A1-207ENST00000498837 TXNP10599 105 aaKnown RBP17.25■□□□□ 0.35
SEC61A1-207ENST00000498837 PDHBP11177 359 aa17.25■□□□□ 0.35
SEC61A1-207ENST00000498837 EDNRBP24530 442 aa17.25■□□□□ 0.35
SEC61A1-207ENST00000498837 CHMP4BP1P59074 171 aa17.25■□□□□ 0.35
SEC61A1-207ENST00000498837 HERC6Q8IVU3 1022 aa17.25■□□□□ 0.35
SEC61A1-207ENST00000498837 TCP11L1Q9NUJ3 509 aa17.25■□□□□ 0.35
SEC61A1-207ENST00000498837 RAD50Q92878 1312 aa17.24■□□□□ 0.35
SEC61A1-207ENST00000498837 RBAK-RBAKDNI3L0D1 243 aa17.24■□□□□ 0.35
SEC61A1-207ENST00000498837 KPNA6O60684 536 aa17.24■□□□□ 0.35
SEC61A1-207ENST00000498837 PLA2G5P39877 138 aa17.24■□□□□ 0.35
SEC61A1-207ENST00000498837 PTPN11Q06124 597 aaPredicted RBP17.24■□□□□ 0.35
SEC61A1-207ENST00000498837 BFSP2Q13515 415 aa17.24■□□□□ 0.35
SEC61A1-207ENST00000498837 DNERQ8NFT8 737 aa17.24■□□□□ 0.35
SEC61A1-207ENST00000498837 KIF28PB7ZC32 967 aa17.23■□□□□ 0.35
SEC61A1-207ENST00000498837 TLL1O43897 1013 aa17.23■□□□□ 0.35
SEC61A1-207ENST00000498837 HAND2P61296 217 aa17.23■□□□□ 0.35
SEC61A1-207ENST00000498837 ZNF543Q08ER8 600 aa17.23■□□□□ 0.35
SEC61A1-207ENST00000498837 GRB10Q13322 594 aa17.23■□□□□ 0.35
SEC61A1-207ENST00000498837 GPNMBQ14956 572 aa17.23■□□□□ 0.35
SEC61A1-207ENST00000498837 USH1GQ495M9 461 aa17.23■□□□□ 0.35
SEC61A1-207ENST00000498837 TMCO2Q7Z6W1 182 aaPredicted RBP17.23■□□□□ 0.35
SEC61A1-207ENST00000498837 FAM227BQ96M60 508 aa17.23■□□□□ 0.35
SEC61A1-207ENST00000498837 CTAGE1Q96RT6 745 aa17.23■□□□□ 0.35
SEC61A1-207ENST00000498837 MPHOSPH6Q99547 160 aaKnown RBP17.23■□□□□ 0.35
SEC61A1-207ENST00000498837 C1QTNF1Q9BXJ1 281 aa17.23■□□□□ 0.35
SEC61A1-207ENST00000498837 EPHX3Q9H6B9 360 aa17.23■□□□□ 0.35
SEC61A1-207ENST00000498837 HELLSQ9NRZ9 838 aa17.23■□□□□ 0.35
SEC61A1-207ENST00000498837 NOD1Q9Y239 953 aa17.23■□□□□ 0.35
SEC61A1-207ENST00000498837 MICAL3Q7RTP6 2002 aa17.23■□□□□ 0.35
SEC61A1-207ENST00000498837 A0A0D9SFI3 127 aa17.22■□□□□ 0.35
SEC61A1-207ENST00000498837 LPXNO60711 386 aa17.22■□□□□ 0.35
SEC61A1-207ENST00000498837 PTGISQ16647 500 aa17.22■□□□□ 0.35
SEC61A1-207ENST00000498837 CCDC62Q6P9F0 684 aa17.22■□□□□ 0.35
SEC61A1-207ENST00000498837 TBC1D5Q92609 795 aa17.22■□□□□ 0.35
SEC61A1-207ENST00000498837 EVI5LQ96CN4 794 aa17.22■□□□□ 0.35
SEC61A1-207ENST00000498837 FAM122AQ96E09 287 aa17.22■□□□□ 0.35
SEC61A1-207ENST00000498837 CPVLQ9H3G5 476 aa17.22■□□□□ 0.35
SEC61A1-207ENST00000498837 COG5Q9UP83 839 aa17.22■□□□□ 0.35
SEC61A1-207ENST00000498837 WDR19Q8NEZ3 1342 aa17.21■□□□□ 0.35
SEC61A1-207ENST00000498837 LAMA4Q16363 1823 aa17.21■□□□□ 0.35
SEC61A1-207ENST00000498837 LCHNA4D1U4 455 aa17.21■□□□□ 0.35
SEC61A1-207ENST00000498837 GOLGA8HP0CJ92 632 aa17.21■□□□□ 0.35
SEC61A1-207ENST00000498837 SNHG28P0DPA3 235 aa17.21■□□□□ 0.35
SEC61A1-207ENST00000498837 HSPD1P10809 573 aaKnown RBP17.21■□□□□ 0.35
SEC61A1-207ENST00000498837 LY6KQ17RY6 165 aa17.21■□□□□ 0.35
SEC61A1-207ENST00000498837 GDF6Q6KF10 455 aaPredicted RBP17.21■□□□□ 0.35
SEC61A1-207ENST00000498837 AFG1LQ8WV93 481 aa17.21■□□□□ 0.35
SEC61A1-207ENST00000498837 HLA-CQ95604 372 aa17.21■□□□□ 0.35
SEC61A1-207ENST00000498837 TTC14Q96N46 770 aa17.21■□□□□ 0.35
SEC61A1-207ENST00000498837 UBA5Q9GZZ9 404 aa17.21■□□□□ 0.35
SEC61A1-207ENST00000498837 PNMA2Q9UL42 364 aa17.21■□□□□ 0.35
SEC61A1-207ENST00000498837 B4DLN1 442 aa17.2■□□□□ 0.34
SEC61A1-207ENST00000498837 BAIAP3O94812 1187 aa17.2■□□□□ 0.34
SEC61A1-207ENST00000498837 KCNJ6P48051 423 aa17.2■□□□□ 0.34
SEC61A1-207ENST00000498837 MRPL12P52815 198 aaKnown RBP17.2■□□□□ 0.34
SEC61A1-207ENST00000498837 WDR5P61964 334 aaKnown RBP17.2■□□□□ 0.34
SEC61A1-207ENST00000498837 TCTN1Q2MV58 587 aa17.2■□□□□ 0.34
SEC61A1-207ENST00000498837 MCMDC2Q4G0Z9 681 aa17.2■□□□□ 0.34
SEC61A1-207ENST00000498837 ANKRD45Q5TZF3 282 aa17.2■□□□□ 0.34
SEC61A1-207ENST00000498837 SEPT14Q6ZU15 432 aa17.2■□□□□ 0.34
SEC61A1-207ENST00000498837 CHST3Q7LGC8 479 aa17.2■□□□□ 0.34
SEC61A1-207ENST00000498837 ZNF589Q86UQ0 364 aaPredicted RBP17.2■□□□□ 0.34
SEC61A1-207ENST00000498837 DHX38Q92620 1227 aaKnown RBP17.2■□□□□ 0.34
SEC61A1-207ENST00000498837 KAT2BQ92831 832 aa17.2■□□□□ 0.34
SEC61A1-207ENST00000498837 TAAR1Q96RJ0 339 aa17.2■□□□□ 0.34
SEC61A1-207ENST00000498837 BAZ2BQ9UIF8 2168 aaKnown RBP17.2■□□□□ 0.34
SEC61A1-207ENST00000498837 NLRC5Q86WI3 1866 aa17.19■□□□□ 0.34
SEC61A1-207ENST00000498837 DOCK5Q9H7D0 1870 aa17.19■□□□□ 0.34
SEC61A1-207ENST00000498837 MMP3P08254 477 aa17.19■□□□□ 0.34
SEC61A1-207ENST00000498837 DEFB103AP81534 67 aa17.19■□□□□ 0.34
SEC61A1-207ENST00000498837 ARHGAP1Q07960 439 aa17.19■□□□□ 0.34
SEC61A1-207ENST00000498837 MFSD6Q6ZSS7 791 aa17.19■□□□□ 0.34
SEC61A1-207ENST00000498837 RGS22Q8NE09 1264 aa17.19■□□□□ 0.34
SEC61A1-207ENST00000498837 CAGE1Q8TC20 777 aa17.19■□□□□ 0.34
SEC61A1-207ENST00000498837 AFAP1L1Q8TED9 768 aa17.19■□□□□ 0.34
SEC61A1-207ENST00000498837 KHSRPQ92945 711 aaKnown RBP eCLIP17.19■□□□□ 0.348e-12■■□□□ 14.3
SEC61A1-207ENST00000498837 ZKSCAN3Q9BRR0 538 aa17.19■□□□□ 0.34
SEC61A1-207ENST00000498837 LRFN3Q9BTN0 628 aa17.19■□□□□ 0.34
SEC61A1-207ENST00000498837 COL20A1Q9P218 1284 aa17.19■□□□□ 0.34
SEC61A1-207ENST00000498837 GH1P01241 217 aa17.18■□□□□ 0.34
SEC61A1-207ENST00000498837 PDE1AP54750 535 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms