RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.36■□□□□ 0.53
SSBP1-214ENST00000498107 EHMT1Q9H9B1 1298 aa18.36■□□□□ 0.53
SSBP1-214ENST00000498107 ORC3Q9UBD5 711 aaPredicted RBP18.36■□□□□ 0.53
SSBP1-214ENST00000498107 MEIS2O14770 477 aa18.35■□□□□ 0.53
SSBP1-214ENST00000498107 PPFIA3O75145 1194 aa18.35■□□□□ 0.53
SSBP1-214ENST00000498107 CTDNEP1O95476 244 aa18.35■□□□□ 0.53
SSBP1-214ENST00000498107 SNAI1O95863 264 aaPredicted RBP18.35■□□□□ 0.53
SSBP1-214ENST00000498107 FOSP01100 380 aaPredicted RBP18.35■□□□□ 0.53
SSBP1-214ENST00000498107 HMGN5P82970 282 aaKnown RBP18.35■□□□□ 0.53
SSBP1-214ENST00000498107 MTFR1Q15390 333 aa18.35■□□□□ 0.53
SSBP1-214ENST00000498107 USP17L6PQ6QN14 398 aa18.35■□□□□ 0.53
SSBP1-214ENST00000498107 FCHSD1Q86WN1 690 aa18.35■□□□□ 0.53
SSBP1-214ENST00000498107 NSUN7Q8NE18 718 aaKnown RBP18.35■□□□□ 0.53
SSBP1-214ENST00000498107 PURBQ96QR8 312 aaKnown RBP18.35■□□□□ 0.53
SSBP1-214ENST00000498107 UNC93B1Q9H1C4 597 aa18.35■□□□□ 0.53
SSBP1-214ENST00000498107 VTA1Q9NP79 307 aa18.35■□□□□ 0.53
SSBP1-214ENST00000498107 PXMP2Q9NR77 195 aa18.35■□□□□ 0.53
SSBP1-214ENST00000498107 COL20A1Q9P218 1284 aa18.35■□□□□ 0.53
SSBP1-214ENST00000498107 ASTN1O14525 1302 aa18.34■□□□□ 0.53
SSBP1-214ENST00000498107 MCM3APO60318 1980 aa18.34■□□□□ 0.53
SSBP1-214ENST00000498107 CCDC85CA6NKD9 419 aa18.34■□□□□ 0.53
SSBP1-214ENST00000498107 SEPT4O43236 478 aa18.34■□□□□ 0.53
SSBP1-214ENST00000498107 MYCP01106 439 aaPredicted RBP18.34■□□□□ 0.53
SSBP1-214ENST00000498107 GJB1P08034 283 aa18.34■□□□□ 0.53
SSBP1-214ENST00000498107 EDNRBP24530 442 aa18.34■□□□□ 0.53
SSBP1-214ENST00000498107 CNGA1P29973 690 aa18.34■□□□□ 0.53
SSBP1-214ENST00000498107 NLRP5P59047 1200 aa18.34■□□□□ 0.53
SSBP1-214ENST00000498107 AP3B2Q13367 1082 aa18.34■□□□□ 0.53
SSBP1-214ENST00000498107 ACVR2BQ13705 512 aa18.34■□□□□ 0.53
SSBP1-214ENST00000498107 GALNT17Q6IS24 598 aa18.34■□□□□ 0.53
SSBP1-214ENST00000498107 TYW1BQ6NUM6 668 aa18.34■□□□□ 0.53
SSBP1-214ENST00000498107 TMX3Q96JJ7 454 aa18.34■□□□□ 0.53
SSBP1-214ENST00000498107 PAK6Q9NQU5 681 aaPredicted RBP18.34■□□□□ 0.53
SSBP1-214ENST00000498107 ZHX1Q9UKY1 873 aaPredicted RBP18.34■□□□□ 0.53
SSBP1-214ENST00000498107 HTTP42858 3142 aa18.33■□□□□ 0.53
SSBP1-214ENST00000498107 NR3C2P08235 984 aa18.33■□□□□ 0.52
SSBP1-214ENST00000498107 AKR1A1P14550 325 aa18.33■□□□□ 0.52
SSBP1-214ENST00000498107 EIF2AK2P19525 551 aaKnown RBP18.33■□□□□ 0.52
SSBP1-214ENST00000498107 CCND3P30281 292 aaPredicted RBP18.33■□□□□ 0.52
SSBP1-214ENST00000498107 STXBP2Q15833 593 aa18.33■□□□□ 0.52
SSBP1-214ENST00000498107 XRRA1Q6P2D8 792 aa18.33■□□□□ 0.52
SSBP1-214ENST00000498107 PDCD2LQ9BRP1 358 aa18.33■□□□□ 0.52
SSBP1-214ENST00000498107 VPS54Q9P1Q0 977 aa18.33■□□□□ 0.52
SSBP1-214ENST00000498107 FAM184BQ9ULE4 1060 aa18.33■□□□□ 0.52
SSBP1-214ENST00000498107 KIF3AQ9Y496 699 aa18.33■□□□□ 0.52
SSBP1-214ENST00000498107 KIAA0100Q14667 2235 aaKnown RBP18.33■□□□□ 0.52
SSBP1-214ENST00000498107 FRMPD4Q14CM0 1322 aa18.32■□□□□ 0.52
SSBP1-214ENST00000498107 EIF3JO75822 258 aaKnown RBP18.32■□□□□ 0.52
SSBP1-214ENST00000498107 ZNF865P0CJ78 1059 aaPredicted RBP18.32■□□□□ 0.52
SSBP1-214ENST00000498107 CCND2P30279 289 aa18.32■□□□□ 0.52
SSBP1-214ENST00000498107 PGM5Q15124 567 aa18.32■□□□□ 0.52
SSBP1-214ENST00000498107 PRAMEF19Q5SWL8 479 aa18.32■□□□□ 0.52
SSBP1-214ENST00000498107 REXO1Q8N1G1 1221 aaKnown RBP18.32■□□□□ 0.52
SSBP1-214ENST00000498107 ALG1Q9BT22 464 aa18.32■□□□□ 0.52
SSBP1-214ENST00000498107 DDX20Q9UHI6 824 aaKnown RBP18.32■□□□□ 0.52
SSBP1-214ENST00000498107 STAM2O75886 525 aa18.31■□□□□ 0.52
SSBP1-214ENST00000498107 CD2BP2O95400 341 aaKnown RBP18.31■□□□□ 0.52
SSBP1-214ENST00000498107 ST3GAL1Q11201 340 aa18.31■□□□□ 0.52
SSBP1-214ENST00000498107 TRIM29Q14134 588 aa18.31■□□□□ 0.52
SSBP1-214ENST00000498107 UBE2SQ16763 222 aa18.31■□□□□ 0.52
SSBP1-214ENST00000498107 IQSEC1Q6DN90 963 aa18.31■□□□□ 0.52
SSBP1-214ENST00000498107 FAM184AQ8NB25 1140 aa18.31■□□□□ 0.52
SSBP1-214ENST00000498107 TRPV1Q8NER1 839 aa18.31■□□□□ 0.52
SSBP1-214ENST00000498107 DEFB118Q96PH6 123 aa18.31■□□□□ 0.52
SSBP1-214ENST00000498107 PCDHA6Q9UN73 950 aa18.31■□□□□ 0.52
SSBP1-214ENST00000498107 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.31■□□□□ 0.52
SSBP1-214ENST00000498107 PCDHA8Q9Y5H6 950 aa18.31■□□□□ 0.52
SSBP1-214ENST00000498107 JAK2O60674 1132 aa18.3■□□□□ 0.52
SSBP1-214ENST00000498107 SGPL1O95470 568 aa18.3■□□□□ 0.52
SSBP1-214ENST00000498107 RARBP10826 455 aa18.3■□□□□ 0.52
SSBP1-214ENST00000498107 MYCLP12524 364 aaPredicted RBP18.3■□□□□ 0.52
SSBP1-214ENST00000498107 FDPSP14324 419 aaKnown RBP18.3■□□□□ 0.52
SSBP1-214ENST00000498107 GJA8P48165 433 aa18.3■□□□□ 0.52
SSBP1-214ENST00000498107 CLK2P49760 499 aaKnown RBP18.3■□□□□ 0.52
SSBP1-214ENST00000498107 VSIG10LQ86VR7 867 aa18.3■□□□□ 0.52
SSBP1-214ENST00000498107 FBXO16Q8IX29 292 aaPredicted RBP18.3■□□□□ 0.52
SSBP1-214ENST00000498107 DAGLBQ8NCG7 672 aa18.3■□□□□ 0.52
SSBP1-214ENST00000498107 U2AF1L4Q8WU68 220 aaKnown RBP18.3■□□□□ 0.52
SSBP1-214ENST00000498107 SNX21Q969T3 373 aa18.3■□□□□ 0.52
SSBP1-214ENST00000498107 KATNBL1Q9H079 304 aa18.3■□□□□ 0.52
SSBP1-214ENST00000498107 BRMS1Q9HCU9 246 aa18.3■□□□□ 0.52
SSBP1-214ENST00000498107 PCDHA4Q9UN74 947 aa18.3■□□□□ 0.52
SSBP1-214ENST00000498107 CCDC144BQ3MJ40 725 aa18.29■□□□□ 0.52
SSBP1-214ENST00000498107 PCNX4Q63HM2 1172 aa18.29■□□□□ 0.52
SSBP1-214ENST00000498107 KCNV1Q6PIU1 500 aa18.29■□□□□ 0.52
SSBP1-214ENST00000498107 EEPD1Q7L9B9 569 aa18.29■□□□□ 0.52
SSBP1-214ENST00000498107 SCFD2Q8WU76 684 aa18.29■□□□□ 0.52
SSBP1-214ENST00000498107 ANO3Q9BYT9 981 aa18.29■□□□□ 0.52
SSBP1-214ENST00000498107 RBM47A0AV96 593 aaKnown RBP18.28■□□□□ 0.52
SSBP1-214ENST00000498107 TFRCP02786 760 aaKnown RBP18.28■□□□□ 0.52
SSBP1-214ENST00000498107 TNFAIP2Q03169 654 aa18.28■□□□□ 0.52
SSBP1-214ENST00000498107 TTLL4Q14679 1199 aa18.28■□□□□ 0.52
SSBP1-214ENST00000498107 GNPTABQ3T906 1256 aa18.28■□□□□ 0.52
SSBP1-214ENST00000498107 JAKMIP3Q5VZ66 844 aa18.28■□□□□ 0.52
SSBP1-214ENST00000498107 TAPT1Q6NXT6 567 aa18.28■□□□□ 0.52
SSBP1-214ENST00000498107 BLIDQ8IZY5 108 aa18.28■□□□□ 0.52
SSBP1-214ENST00000498107 AIFM3Q96NN9 605 aa18.28■□□□□ 0.52
SSBP1-214ENST00000498107 PHF20Q9BVI0 1012 aa18.28■□□□□ 0.52
SSBP1-214ENST00000498107 CRISPLD2Q9H0B8 497 aa18.28■□□□□ 0.52
SSBP1-214ENST00000498107 SPC25Q9HBM1 224 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms