RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 RGS2P41220 211 aa15.51■□□□□ 0.07
CPNE1-227ENST00000498056 ALDH5A1P51649 535 aaPredicted RBP15.51■□□□□ 0.07
CPNE1-227ENST00000498056 CAP1Q01518 475 aa15.51■□□□□ 0.07
CPNE1-227ENST00000498056 PRKCZQ05513 592 aa15.51■□□□□ 0.07
CPNE1-227ENST00000498056 NONOQ15233 471 aaKnown RBP eCLIP15.51■□□□□ 0.07
CPNE1-227ENST00000498056 MORN1Q5T089 497 aa15.51■□□□□ 0.07
CPNE1-227ENST00000498056 PIK3AP1Q6ZUJ8 805 aa15.51■□□□□ 0.07
CPNE1-227ENST00000498056 KRT25Q7Z3Z0 450 aa15.51■□□□□ 0.07
CPNE1-227ENST00000498056 FAM133AQ8N9E0 248 aa15.51■□□□□ 0.07
CPNE1-227ENST00000498056 TAAR1Q96RJ0 339 aa15.51■□□□□ 0.07
CPNE1-227ENST00000498056 RMDN3Q96TC7 470 aa15.51■□□□□ 0.07
CPNE1-227ENST00000498056 PXMP2Q9NR77 195 aa15.51■□□□□ 0.07
CPNE1-227ENST00000498056 MAP3K20Q9NYL2 800 aaKnown RBP15.51■□□□□ 0.07
CPNE1-227ENST00000498056 ASTN1O14525 1302 aa15.5■□□□□ 0.07
CPNE1-227ENST00000498056 DNAJC25-GNG10A0A024R161 153 aa15.5■□□□□ 0.07
CPNE1-227ENST00000498056 FOSP01100 380 aaPredicted RBP15.5■□□□□ 0.07
CPNE1-227ENST00000498056 CTCFP49711 727 aaPredicted RBP15.5■□□□□ 0.07
CPNE1-227ENST00000498056 ARHGEF6Q15052 776 aa15.5■□□□□ 0.07
CPNE1-227ENST00000498056 ARHGEF16Q5VV41 709 aa15.5■□□□□ 0.07
CPNE1-227ENST00000498056 NOSTRINQ8IVI9 506 aa15.5■□□□□ 0.07
CPNE1-227ENST00000498056 MAF1Q9H063 256 aa15.5■□□□□ 0.07
CPNE1-227ENST00000498056 FOXP1Q9H334 677 aaPredicted RBP15.5■□□□□ 0.07
CPNE1-227ENST00000498056 SLC5A4Q9NY91 659 aa15.5■□□□□ 0.07
CPNE1-227ENST00000498056 ADD3Q9UEY8 706 aaKnown RBP15.5■□□□□ 0.07
CPNE1-227ENST00000498056 GABRQQ9UN88 632 aa15.5■□□□□ 0.07
CPNE1-227ENST00000498056 TRIM17Q9Y577 477 aa15.5■□□□□ 0.07
CPNE1-227ENST00000498056 FRMPD4Q14CM0 1322 aa15.49■□□□□ 0.07
CPNE1-227ENST00000498056 RPTORQ8N122 1335 aa15.49■□□□□ 0.07
CPNE1-227ENST00000498056 M0R2N6 131 aa15.49■□□□□ 0.07
CPNE1-227ENST00000498056 COBLO75128 1261 aa15.49■□□□□ 0.07
CPNE1-227ENST00000498056 ZSCAN22P10073 491 aaPredicted RBP15.49■□□□□ 0.07
CPNE1-227ENST00000498056 FLT3LGP49771 235 aa15.49■□□□□ 0.07
CPNE1-227ENST00000498056 INF2Q27J81 1249 aa15.49■□□□□ 0.07
CPNE1-227ENST00000498056 EARS2Q5JPH6 523 aaKnown RBP15.49■□□□□ 0.07
CPNE1-227ENST00000498056 MCTP2Q6DN12 878 aa15.49■□□□□ 0.07
CPNE1-227ENST00000498056 TEX2Q8IWB9 1127 aa15.49■□□□□ 0.07
CPNE1-227ENST00000498056 DNERQ8NFT8 737 aa15.49■□□□□ 0.07
CPNE1-227ENST00000498056 IL31RAQ8NI17 732 aa15.49■□□□□ 0.07
CPNE1-227ENST00000498056 TNFRSF25Q93038 417 aa15.49■□□□□ 0.07
CPNE1-227ENST00000498056 FGD4Q96M96 766 aa15.49■□□□□ 0.07
CPNE1-227ENST00000498056 MPHOSPH6Q99547 160 aaKnown RBP15.49■□□□□ 0.07
CPNE1-227ENST00000498056 SOWAHBA6NEL2 793 aa15.48■□□□□ 0.07
CPNE1-227ENST00000498056 F13A1P00488 732 aa15.48■□□□□ 0.07
CPNE1-227ENST00000498056 MYCLP12524 364 aaPredicted RBP15.48■□□□□ 0.07
CPNE1-227ENST00000498056 HOXD10P28358 340 aa15.48■□□□□ 0.07
CPNE1-227ENST00000498056 LBX1P52954 281 aa15.48■□□□□ 0.07
CPNE1-227ENST00000498056 PGM5Q15124 567 aa15.48■□□□□ 0.07
CPNE1-227ENST00000498056 ZNF792Q3KQV3 632 aa15.48■□□□□ 0.07
CPNE1-227ENST00000498056 NPLOC4Q8TAT6 608 aa15.48■□□□□ 0.07
CPNE1-227ENST00000498056 NSUN6Q8TEA1 469 aaKnown RBP15.48■□□□□ 0.07
CPNE1-227ENST00000498056 TBCKQ8TEA7 893 aa15.48■□□□□ 0.07
CPNE1-227ENST00000498056 MAML3Q96JK9 1138 aa15.48■□□□□ 0.07
CPNE1-227ENST00000498056 PDCD2LQ9BRP1 358 aa15.48■□□□□ 0.07
CPNE1-227ENST00000498056 SRRDQ9UH36 339 aa15.48■□□□□ 0.07
CPNE1-227ENST00000498056 NOL7Q9UMY1 257 aaKnown RBP15.48■□□□□ 0.07
CPNE1-227ENST00000498056 DDX49Q9Y6V7 483 aaKnown RBP15.48■□□□□ 0.07
CPNE1-227ENST00000498056 GNRH1P01148 92 aa15.47■□□□□ 0.07
CPNE1-227ENST00000498056 CCND2P30279 289 aa15.47■□□□□ 0.07
CPNE1-227ENST00000498056 DDIT3P35638 169 aa15.47■□□□□ 0.07
CPNE1-227ENST00000498056 SREBF1P36956 1147 aa15.47■□□□□ 0.07
CPNE1-227ENST00000498056 ARHGAP4P98171 946 aa15.47■□□□□ 0.07
CPNE1-227ENST00000498056 PDE4DQ08499 809 aa15.47■□□□□ 0.07
CPNE1-227ENST00000498056 RESTQ13127 1097 aa15.47■□□□□ 0.07
CPNE1-227ENST00000498056 OTOP1Q7RTM1 612 aa15.47■□□□□ 0.07
CPNE1-227ENST00000498056 BRAPQ7Z569 592 aa15.47■□□□□ 0.07
CPNE1-227ENST00000498056 RAET1EQ8TD07 263 aa15.47■□□□□ 0.07
CPNE1-227ENST00000498056 USP6NLQ92738 828 aa15.47■□□□□ 0.07
CPNE1-227ENST00000498056 ASB14A6NK59 587 aa15.46■□□□□ 0.07
CPNE1-227ENST00000498056 B4DLN1 442 aa15.46■□□□□ 0.07
CPNE1-227ENST00000498056 PDIA4P13667 645 aaKnown RBP15.46■□□□□ 0.07
CPNE1-227ENST00000498056 ATP2B1P20020 1258 aa15.46■□□□□ 0.07
CPNE1-227ENST00000498056 U2AF2P26368 475 aaKnown RBP eCLIP15.46■□□□□ 0.07
CPNE1-227ENST00000498056 CCL14Q16627 93 aa15.46■□□□□ 0.07
CPNE1-227ENST00000498056 LETM2Q2VYF4 491 aa15.46■□□□□ 0.07
CPNE1-227ENST00000498056 ARMCX2Q7L311 632 aa15.46■□□□□ 0.07
CPNE1-227ENST00000498056 NEK8Q86SG6 692 aa15.46■□□□□ 0.07
CPNE1-227ENST00000498056 ZFP91Q96JP5 570 aaPredicted RBP15.46■□□□□ 0.07
CPNE1-227ENST00000498056 GJD2Q9UKL4 321 aa15.46■□□□□ 0.07
CPNE1-227ENST00000498056 BRD1O95696 1058 aa15.45■□□□□ 0.06
CPNE1-227ENST00000498056 NR3C2P08235 984 aa15.45■□□□□ 0.06
CPNE1-227ENST00000498056 HOXC6P09630 235 aa15.45■□□□□ 0.06
CPNE1-227ENST00000498056 ZNF76P36508 570 aa15.45■□□□□ 0.06
CPNE1-227ENST00000498056 NUCB2P80303 420 aa15.45■□□□□ 0.06
CPNE1-227ENST00000498056 FOXD4L6Q3SYB3 417 aaPredicted RBP15.45■□□□□ 0.06
CPNE1-227ENST00000498056 PCNX4Q63HM2 1172 aa15.45■□□□□ 0.06
CPNE1-227ENST00000498056 FOXD4L3Q6VB84 417 aaPredicted RBP15.45■□□□□ 0.06
CPNE1-227ENST00000498056 EEPD1Q7L9B9 569 aa15.45■□□□□ 0.06
CPNE1-227ENST00000498056 ZNF467Q7Z7K2 595 aaPredicted RBP15.45■□□□□ 0.06
CPNE1-227ENST00000498056 FBXO16Q8IX29 292 aaPredicted RBP15.45■□□□□ 0.06
CPNE1-227ENST00000498056 TRIB2Q92519 343 aa15.45■□□□□ 0.06
CPNE1-227ENST00000498056 FLRT1Q9NZU1 646 aa15.45■□□□□ 0.06
CPNE1-227ENST00000498056 CIZ1Q9ULV3 898 aaPredicted RBP15.45■□□□□ 0.06
CPNE1-227ENST00000498056 DIS3Q9Y2L1 958 aaKnown RBP15.45■□□□□ 0.06
CPNE1-227ENST00000498056 MYH9P35579 1960 aaKnown RBP15.44■□□□□ 0.06
CPNE1-227ENST00000498056 TDP2O95551 362 aa15.44■□□□□ 0.06
CPNE1-227ENST00000498056 ELNP15502 786 aa15.44■□□□□ 0.06
CPNE1-227ENST00000498056 PRMT2P55345 433 aa15.44■□□□□ 0.06
CPNE1-227ENST00000498056 TTC38Q5R3I4 469 aa15.44■□□□□ 0.06
CPNE1-227ENST00000498056 MYSM1Q5VVJ2 828 aa15.44■□□□□ 0.06
CPNE1-227ENST00000498056 FAM173BQ6P4H8 233 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms