RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 KCNJ14Q9UNX9 436 aa16.91■□□□□ 0.3
HDAC9-226ENST00000496026 ASTN1O14525 1302 aa16.91■□□□□ 0.3
HDAC9-226ENST00000496026 SYNGAP1Q96PV0 1343 aa16.91■□□□□ 0.3
HDAC9-226ENST00000496026 LOC102724159A0A0B4J2E5 919 aa16.9■□□□□ 0.3
HDAC9-226ENST00000496026 FOSP01100 380 aaPredicted RBP16.9■□□□□ 0.3
HDAC9-226ENST00000496026 HSP90AA1P07900 732 aaKnown RBP16.9■□□□□ 0.3
HDAC9-226ENST00000496026 GJB2P29033 226 aa16.9■□□□□ 0.3
HDAC9-226ENST00000496026 PDE4DQ08499 809 aa16.9■□□□□ 0.3
HDAC9-226ENST00000496026 TRIM32Q13049 653 aa16.9■□□□□ 0.3
HDAC9-226ENST00000496026 PWP2Q15269 919 aaKnown RBP16.9■□□□□ 0.3
HDAC9-226ENST00000496026 MCTP2Q6DN12 878 aa16.9■□□□□ 0.3
HDAC9-226ENST00000496026 GALNT17Q6IS24 598 aa16.9■□□□□ 0.3
HDAC9-226ENST00000496026 REXO1Q8N1G1 1221 aaKnown RBP16.9■□□□□ 0.3
HDAC9-226ENST00000496026 C8orf76Q96K31 380 aa16.9■□□□□ 0.3
HDAC9-226ENST00000496026 PHF20Q9BVI0 1012 aa16.9■□□□□ 0.3
HDAC9-226ENST00000496026 GJB4Q9NTQ9 266 aa16.9■□□□□ 0.3
HDAC9-226ENST00000496026 FOXD4L1Q9NU39 408 aa16.9■□□□□ 0.3
HDAC9-226ENST00000496026 TMEM260Q9NX78 707 aa16.9■□□□□ 0.3
HDAC9-226ENST00000496026 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.9■□□□□ 0.3
HDAC9-226ENST00000496026 PCDHA6Q9UN73 950 aa16.9■□□□□ 0.3
HDAC9-226ENST00000496026 PCDHA4Q9UN74 947 aa16.9■□□□□ 0.3
HDAC9-226ENST00000496026 CNPY2Q9Y2B0 182 aa16.9■□□□□ 0.3
HDAC9-226ENST00000496026 PCDHA8Q9Y5H6 950 aa16.9■□□□□ 0.3
HDAC9-226ENST00000496026 SMCHD1A6NHR9 2005 aa16.89■□□□□ 0.29
HDAC9-226ENST00000496026 MYCP01106 439 aaPredicted RBP16.89■□□□□ 0.29
HDAC9-226ENST00000496026 PRKAR2AP13861 404 aaKnown RBP16.89■□□□□ 0.29
HDAC9-226ENST00000496026 CACNB2Q08289 660 aaPredicted RBP16.89■□□□□ 0.29
HDAC9-226ENST00000496026 AP3B2Q13367 1082 aa16.89■□□□□ 0.29
HDAC9-226ENST00000496026 JAKMIP3Q5VZ66 844 aa16.89■□□□□ 0.29
HDAC9-226ENST00000496026 BLIDQ8IZY5 108 aa16.89■□□□□ 0.29
HDAC9-226ENST00000496026 PGBD1Q96JS3 809 aa16.89■□□□□ 0.29
HDAC9-226ENST00000496026 IWS1Q96ST2 819 aa16.89■□□□□ 0.29
HDAC9-226ENST00000496026 PDCD2LQ9BRP1 358 aa16.89■□□□□ 0.29
HDAC9-226ENST00000496026 BRMS1Q9HCU9 246 aa16.89■□□□□ 0.29
HDAC9-226ENST00000496026 DDX49Q9Y6V7 483 aaKnown RBP16.89■□□□□ 0.29
HDAC9-226ENST00000496026 RBBP6Q7Z6E9 1792 aaKnown RBP16.88■□□□□ 0.29
HDAC9-226ENST00000496026 SNAI1O95863 264 aaPredicted RBP16.88■□□□□ 0.29
HDAC9-226ENST00000496026 NR3C2P08235 984 aa16.88■□□□□ 0.29
HDAC9-226ENST00000496026 MYCLP12524 364 aaPredicted RBP16.88■□□□□ 0.29
HDAC9-226ENST00000496026 CLK2P49760 499 aaKnown RBP16.88■□□□□ 0.29
HDAC9-226ENST00000496026 GUCY1B3Q02153 619 aa16.88■□□□□ 0.29
HDAC9-226ENST00000496026 BECN1Q14457 450 aa16.88■□□□□ 0.29
HDAC9-226ENST00000496026 PGM5Q15124 567 aa16.88■□□□□ 0.29
HDAC9-226ENST00000496026 STXBP2Q15833 593 aa16.88■□□□□ 0.29
HDAC9-226ENST00000496026 PRAMEF19Q5SWL8 479 aa16.88■□□□□ 0.29
HDAC9-226ENST00000496026 KRT40Q6A162 431 aa16.88■□□□□ 0.29
HDAC9-226ENST00000496026 EEPD1Q7L9B9 569 aa16.88■□□□□ 0.29
HDAC9-226ENST00000496026 DAGLBQ8NCG7 672 aa16.88■□□□□ 0.29
HDAC9-226ENST00000496026 RASGRP4Q8TDF6 673 aa16.88■□□□□ 0.29
HDAC9-226ENST00000496026 INTS4Q96HW7 963 aaKnown RBP16.88■□□□□ 0.29
HDAC9-226ENST00000496026 ANO3Q9BYT9 981 aa16.88■□□□□ 0.29
HDAC9-226ENST00000496026 ZHX1Q9UKY1 873 aaPredicted RBP16.88■□□□□ 0.29
HDAC9-226ENST00000496026 ADAMTS3O15072 1205 aa16.87■□□□□ 0.29
HDAC9-226ENST00000496026 IGHA2P01877 340 aa16.87■□□□□ 0.29
HDAC9-226ENST00000496026 EDNRBP24530 442 aa16.87■□□□□ 0.29
HDAC9-226ENST00000496026 CNGA1P29973 690 aa16.87■□□□□ 0.29
HDAC9-226ENST00000496026 CCND2P30279 289 aa16.87■□□□□ 0.29
HDAC9-226ENST00000496026 KRT2P35908 639 aa16.87■□□□□ 0.29
HDAC9-226ENST00000496026 ACVR2BQ13705 512 aa16.87■□□□□ 0.29
HDAC9-226ENST00000496026 SAFBQ15424 915 aaKnown RBP eCLIP16.87■□□□□ 0.29
HDAC9-226ENST00000496026 MAP3K21Q5TCX8 1036 aa16.87■□□□□ 0.29
HDAC9-226ENST00000496026 MORC4Q8TE76 937 aa16.87■□□□□ 0.29
HDAC9-226ENST00000496026 ARMC5Q96C12 935 aa16.87■□□□□ 0.29
HDAC9-226ENST00000496026 ABHD16BQ9H3Z7 469 aa16.87■□□□□ 0.29
HDAC9-226ENST00000496026 HMX1Q9NP08 348 aaPredicted RBP16.87■□□□□ 0.29
HDAC9-226ENST00000496026 NRBP1Q9UHY1 535 aa16.87■□□□□ 0.29
HDAC9-226ENST00000496026 DOCK3Q8IZD9 2030 aa16.87■□□□□ 0.29
HDAC9-226ENST00000496026 MMP1P03956 469 aa16.86■□□□□ 0.29
HDAC9-226ENST00000496026 CYBAP13498 195 aa16.86■□□□□ 0.29
HDAC9-226ENST00000496026 NPY5RQ15761 445 aa16.86■□□□□ 0.29
HDAC9-226ENST00000496026 FBXO16Q8IX29 292 aaPredicted RBP16.86■□□□□ 0.29
HDAC9-226ENST00000496026 IL31RAQ8NI17 732 aa16.86■□□□□ 0.29
HDAC9-226ENST00000496026 ZNF333Q96JL9 665 aa16.86■□□□□ 0.29
HDAC9-226ENST00000496026 VTA1Q9NP79 307 aa16.86■□□□□ 0.29
HDAC9-226ENST00000496026 RPTORQ8N122 1335 aa16.86■□□□□ 0.29
HDAC9-226ENST00000496026 H3BQV1 296 aa16.85■□□□□ 0.29
HDAC9-226ENST00000496026 CCL5P13501 91 aa16.85■□□□□ 0.29
HDAC9-226ENST00000496026 CCND3P30281 292 aaPredicted RBP16.85■□□□□ 0.29
HDAC9-226ENST00000496026 IFFO2Q5TF58 517 aa16.85■□□□□ 0.29
HDAC9-226ENST00000496026 PCNX4Q63HM2 1172 aa16.85■□□□□ 0.29
HDAC9-226ENST00000496026 KRT25Q7Z3Z0 450 aa16.85■□□□□ 0.29
HDAC9-226ENST00000496026 DIS3L2Q8IYB7 885 aaKnown RBP16.85■□□□□ 0.29
HDAC9-226ENST00000496026 TNS4Q8IZW8 715 aa16.85■□□□□ 0.29
HDAC9-226ENST00000496026 FBXO18Q8NFZ0 1043 aa16.85■□□□□ 0.29
HDAC9-226ENST00000496026 OXER1Q8TDS5 423 aa16.85■□□□□ 0.29
HDAC9-226ENST00000496026 ZNFX1Q9P2E3 1918 aaKnown RBP16.85■□□□□ 0.29
HDAC9-226ENST00000496026 FRMPD4Q14CM0 1322 aa16.85■□□□□ 0.29
HDAC9-226ENST00000496026 CCDC194A0A1B0GVG4 234 aa16.84■□□□□ 0.29
HDAC9-226ENST00000496026 EIF3JO75822 258 aaKnown RBP16.84■□□□□ 0.29
HDAC9-226ENST00000496026 ZNF865P0CJ78 1059 aaPredicted RBP16.84■□□□□ 0.29
HDAC9-226ENST00000496026 SREBF1P36956 1147 aa16.84■□□□□ 0.29
HDAC9-226ENST00000496026 GNL2Q13823 731 aaKnown RBP16.84■□□□□ 0.29
HDAC9-226ENST00000496026 MTFR1Q15390 333 aa16.84■□□□□ 0.29
HDAC9-226ENST00000496026 LARP1BQ659C4 914 aaKnown RBP16.84■□□□□ 0.29
HDAC9-226ENST00000496026 XRRA1Q6P2D8 792 aa16.84■□□□□ 0.29
HDAC9-226ENST00000496026 VSIG10LQ86VR7 867 aa16.84■□□□□ 0.29
HDAC9-226ENST00000496026 SPRYD3Q8NCJ5 442 aa16.84■□□□□ 0.29
HDAC9-226ENST00000496026 TRPV1Q8NER1 839 aa16.84■□□□□ 0.29
HDAC9-226ENST00000496026 ZFP91Q96JP5 570 aaPredicted RBP16.84■□□□□ 0.29
HDAC9-226ENST00000496026 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms