RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 SLC9A7Q96T83 725 aa17.18■□□□□ 0.34
PCCB-219ENST00000494742 RNF41Q9H4P4 317 aaPredicted RBP17.18■□□□□ 0.34
PCCB-219ENST00000494742 CHD7Q9P2D1 2997 aa17.18■□□□□ 0.34
PCCB-219ENST00000494742 A0A0D9SFI3 127 aa17.17■□□□□ 0.34
PCCB-219ENST00000494742 MFAP1P55081 439 aaKnown RBP17.17■□□□□ 0.34
PCCB-219ENST00000494742 SCN5AQ14524 2016 aa17.17■□□□□ 0.34
PCCB-219ENST00000494742 TTLL4Q14679 1199 aa17.17■□□□□ 0.34
PCCB-219ENST00000494742 AAK1Q2M2I8 961 aa17.17■□□□□ 0.34
PCCB-219ENST00000494742 FAM47CQ5HY64 1035 aa17.17■□□□□ 0.34
PCCB-219ENST00000494742 RETREG2Q8NC44 543 aa17.17■□□□□ 0.34
PCCB-219ENST00000494742 IQCF3P0C7M6 154 aa17.16■□□□□ 0.34
PCCB-219ENST00000494742 TXNP10599 105 aaKnown RBP17.16■□□□□ 0.34
PCCB-219ENST00000494742 MYOGP15173 224 aa17.16■□□□□ 0.34
PCCB-219ENST00000494742 BFSP2Q13515 415 aa17.16■□□□□ 0.34
PCCB-219ENST00000494742 HDAC1Q13547 482 aaPredicted RBP17.16■□□□□ 0.34
PCCB-219ENST00000494742 CCDC178Q5BJE1 867 aa17.16■□□□□ 0.34
PCCB-219ENST00000494742 DEFB128Q7Z7B8 93 aa17.16■□□□□ 0.34
PCCB-219ENST00000494742 DGKHQ86XP1 1220 aa17.16■□□□□ 0.34
PCCB-219ENST00000494742 ESR2Q92731 530 aa17.16■□□□□ 0.34
PCCB-219ENST00000494742 UHRF1Q96T88 793 aaPredicted RBP17.16■□□□□ 0.34
PCCB-219ENST00000494742 CCDC171Q6TFL3 1326 aa17.16■□□□□ 0.34
PCCB-219ENST00000494742 BAIAP3O94812 1187 aa17.15■□□□□ 0.34
PCCB-219ENST00000494742 CCDC155Q8N6L0 562 aa17.15■□□□□ 0.34
PCCB-219ENST00000494742 TRANK1O15050 2925 aa17.15■□□□□ 0.34
PCCB-219ENST00000494742 KIF28PB7ZC32 967 aa17.14■□□□□ 0.33
PCCB-219ENST00000494742 GTPBP6O43824 516 aaPredicted RBP17.14■□□□□ 0.33
PCCB-219ENST00000494742 CA3P07451 260 aa17.14■□□□□ 0.33
PCCB-219ENST00000494742 HAND2P61296 217 aa17.14■□□□□ 0.33
PCCB-219ENST00000494742 NMIQ13287 307 aaPredicted RBP17.14■□□□□ 0.33
PCCB-219ENST00000494742 CCDC62Q6P9F0 684 aa17.14■□□□□ 0.33
PCCB-219ENST00000494742 ZNF589Q86UQ0 364 aaPredicted RBP17.14■□□□□ 0.33
PCCB-219ENST00000494742 SESTD1Q86VW0 696 aa17.14■□□□□ 0.33
PCCB-219ENST00000494742 CAGE1Q8TC20 777 aa17.14■□□□□ 0.33
PCCB-219ENST00000494742 NOD1Q9Y239 953 aa17.14■□□□□ 0.33
PCCB-219ENST00000494742 KIAA1217Q5T5P2 1943 aa17.13■□□□□ 0.33
PCCB-219ENST00000494742 LAMA4Q16363 1823 aa17.13■□□□□ 0.33
PCCB-219ENST00000494742 PARNO95453 639 aaKnown RBP17.13■□□□□ 0.33
PCCB-219ENST00000494742 COL9A1P20849 921 aa17.13■□□□□ 0.33
PCCB-219ENST00000494742 TBC1D10CQ8IV04 446 aa17.13■□□□□ 0.33
PCCB-219ENST00000494742 HERC6Q8IVU3 1022 aa17.13■□□□□ 0.33
PCCB-219ENST00000494742 NSUN6Q8TEA1 469 aaKnown RBP17.13■□□□□ 0.33
PCCB-219ENST00000494742 AFAP1L1Q8TED9 768 aa17.13■□□□□ 0.33
PCCB-219ENST00000494742 COPS5Q92905 334 aa17.13■□□□□ 0.33
PCCB-219ENST00000494742 IWS1Q96ST2 819 aa17.13■□□□□ 0.33
PCCB-219ENST00000494742 FTOQ9C0B1 505 aaKnown RBP eCLIP17.13■□□□□ 0.33
PCCB-219ENST00000494742 ABCB11O95342 1321 aa17.13■□□□□ 0.33
PCCB-219ENST00000494742 BDP1A6H8Y1 2624 aa17.12■□□□□ 0.33
PCCB-219ENST00000494742 ZNF213O14771 459 aa17.12■□□□□ 0.33
PCCB-219ENST00000494742 GH1P01241 217 aa17.12■□□□□ 0.33
PCCB-219ENST00000494742 BMP1P13497 986 aa17.12■□□□□ 0.33
PCCB-219ENST00000494742 RRP1P56182 461 aaKnown RBP17.12■□□□□ 0.33
PCCB-219ENST00000494742 USH1GQ495M9 461 aa17.12■□□□□ 0.33
PCCB-219ENST00000494742 IQCA1Q86XH1 822 aa17.12■□□□□ 0.33
PCCB-219ENST00000494742 MCF2L2Q86YR7 1114 aa17.12■□□□□ 0.33
PCCB-219ENST00000494742 ANKS1AQ92625 1134 aa17.12■□□□□ 0.33
PCCB-219ENST00000494742 COG5Q9UP83 839 aa17.12■□□□□ 0.33
PCCB-219ENST00000494742 MTCH2Q9Y6C9 303 aa17.12■□□□□ 0.33
PCCB-219ENST00000494742 NCOR1O75376 2440 aa17.12■□□□□ 0.33
PCCB-219ENST00000494742 TRIM6-TRIM34B2RNG4 842 aa17.11■□□□□ 0.33
PCCB-219ENST00000494742 ARIH2O95376 493 aa17.11■□□□□ 0.33
PCCB-219ENST00000494742 MMP3P08254 477 aa17.11■□□□□ 0.33
PCCB-219ENST00000494742 CASTP20810 708 aaKnown RBP17.11■□□□□ 0.33
PCCB-219ENST00000494742 RBL2Q08999 1139 aa17.11■□□□□ 0.33
PCCB-219ENST00000494742 AAMPQ13685 434 aa17.11■□□□□ 0.33
PCCB-219ENST00000494742 STXBP2Q15833 593 aa17.11■□□□□ 0.33
PCCB-219ENST00000494742 CDC37Q16543 378 aaPredicted RBP17.11■□□□□ 0.33
PCCB-219ENST00000494742 PTGISQ16647 500 aa17.11■□□□□ 0.33
PCCB-219ENST00000494742 ASPRV1Q53RT3 343 aa17.11■□□□□ 0.33
PCCB-219ENST00000494742 MICALL1Q8N3F8 863 aa17.11■□□□□ 0.33
PCCB-219ENST00000494742 PNMA1Q8ND90 353 aa17.11■□□□□ 0.33
PCCB-219ENST00000494742 GOLGA8HP0CJ92 632 aa17.1■□□□□ 0.33
PCCB-219ENST00000494742 KCNJ6P48051 423 aa17.1■□□□□ 0.33
PCCB-219ENST00000494742 TAP1Q03518 808 aa17.1■□□□□ 0.33
PCCB-219ENST00000494742 ARHGAP1Q07960 439 aa17.1■□□□□ 0.33
PCCB-219ENST00000494742 SYTL5Q8TDW5 730 aaPredicted RBP17.1■□□□□ 0.33
PCCB-219ENST00000494742 AFG1LQ8WV93 481 aa17.1■□□□□ 0.33
PCCB-219ENST00000494742 EMID1Q96A84 441 aaPredicted RBP17.1■□□□□ 0.33
PCCB-219ENST00000494742 UBA5Q9GZZ9 404 aa17.1■□□□□ 0.33
PCCB-219ENST00000494742 KAT14Q9H8E8 782 aa17.1■□□□□ 0.33
PCCB-219ENST00000494742 MRPL11Q9Y3B7 192 aaKnown RBP17.1■□□□□ 0.33
PCCB-219ENST00000494742 NEDD4P46934 1319 aa17.1■□□□□ 0.33
PCCB-219ENST00000494742 REV3LO60673 3130 aa17.1■□□□□ 0.33
PCCB-219ENST00000494742 MYH6P13533 1939 aa17.09■□□□□ 0.33
PCCB-219ENST00000494742 TRIP12Q14669 1992 aaPredicted RBP17.09■□□□□ 0.33
PCCB-219ENST00000494742 SELPP16109 830 aa17.09■□□□□ 0.33
PCCB-219ENST00000494742 SDSP20132 328 aa17.09■□□□□ 0.33
PCCB-219ENST00000494742 SKIV2LQ15477 1246 aaKnown RBP17.09■□□□□ 0.33
PCCB-219ENST00000494742 DGKDQ16760 1214 aa17.09■□□□□ 0.33
PCCB-219ENST00000494742 ADGRF4Q8IZF3 695 aa17.09■□□□□ 0.33
PCCB-219ENST00000494742 RILPL2Q969X0 211 aa17.09■□□□□ 0.33
PCCB-219ENST00000494742 TAAR1Q96RJ0 339 aa17.09■□□□□ 0.33
PCCB-219ENST00000494742 RMDN3Q96TC7 470 aa17.09■□□□□ 0.33
PCCB-219ENST00000494742 ZKSCAN3Q9BRR0 538 aa17.09■□□□□ 0.33
PCCB-219ENST00000494742 KATNAL1Q9BW62 490 aa17.09■□□□□ 0.33
PCCB-219ENST00000494742 PRRC2BQ5JSZ5 2229 aaKnown RBP17.08■□□□□ 0.33
PCCB-219ENST00000494742 TET1Q8NFU7 2136 aa17.08■□□□□ 0.33
PCCB-219ENST00000494742 PTPRSQ13332 1948 aa17.08■□□□□ 0.33
PCCB-219ENST00000494742 RFXAPO00287 272 aa17.08■□□□□ 0.32
PCCB-219ENST00000494742 TLL1O43897 1013 aa17.08■□□□□ 0.32
PCCB-219ENST00000494742 KDM4AO75164 1064 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms