RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 CHRDL2Q6WN34 429 aa11.96□□□□□ -0.49
PRPF4B-209ENST00000494674 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.96□□□□□ -0.49
PRPF4B-209ENST00000494674 VSTM4Q8IW00 320 aa11.96□□□□□ -0.49
PRPF4B-209ENST00000494674 RASSF8Q8NHQ8 419 aa11.96□□□□□ -0.49
PRPF4B-209ENST00000494674 GJA10Q969M2 543 aa11.96□□□□□ -0.49
PRPF4B-209ENST00000494674 LENG9Q96B70 501 aa11.96□□□□□ -0.49
PRPF4B-209ENST00000494674 C7orf25Q9BPX7 421 aa11.96□□□□□ -0.49
PRPF4B-209ENST00000494674 TRIM9Q9C026 710 aa11.96□□□□□ -0.49
PRPF4B-209ENST00000494674 CTNND2Q9UQB3 1225 aa11.96□□□□□ -0.49
PRPF4B-209ENST00000494674 POLR2AP24928 1970 aaKnown RBP11.96□□□□□ -0.5
PRPF4B-209ENST00000494674 RHOBTB3O94955 611 aa11.95□□□□□ -0.5
PRPF4B-209ENST00000494674 SERPINC1P01008 464 aa11.95□□□□□ -0.5
PRPF4B-209ENST00000494674 SREBF1P36956 1147 aa11.95□□□□□ -0.5
PRPF4B-209ENST00000494674 STX17P56962 302 aa11.95□□□□□ -0.5
PRPF4B-209ENST00000494674 GSDMDP57764 484 aa11.95□□□□□ -0.5
PRPF4B-209ENST00000494674 ARHGAP4P98171 946 aa11.95□□□□□ -0.5
PRPF4B-209ENST00000494674 SEMA3FQ13275 785 aa11.95□□□□□ -0.5
PRPF4B-209ENST00000494674 TMEM266Q2M3C6 531 aa11.95□□□□□ -0.5
PRPF4B-209ENST00000494674 MCTP2Q6DN12 878 aa11.95□□□□□ -0.5
PRPF4B-209ENST00000494674 UPF1Q92900 1129 aaKnown RBP eCLIP11.95□□□□□ -0.5
PRPF4B-209ENST00000494674 NAP1L4Q99733 375 aaKnown RBP11.95□□□□□ -0.5
PRPF4B-209ENST00000494674 RWDD2AQ9UIY3 292 aa11.95□□□□□ -0.5
PRPF4B-209ENST00000494674 A0A1B0GTH6 734 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 PRCPP42785 496 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 TBX2Q13207 712 aaPredicted RBP11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 TNFAIP1Q13829 316 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 ZYXQ15942 572 aaKnown RBP11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 ECM1Q16610 540 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 PTPN21Q16825 1174 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 TBC1D10BQ4KMP7 808 aaPredicted RBP11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 KCNK18Q7Z418 384 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 TEX2Q8IWB9 1127 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 ADSSL1Q8N142 457 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 GIMAP8Q8ND71 665 aaPredicted RBP11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 ETNPPLQ8TBG4 499 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 SH2D4AQ9H788 454 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 FBXO28Q9NVF7 368 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 STK17AQ9UEE5 414 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 CNOT7Q9UIV1 285 aaKnown RBP11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 HACL1Q9UJ83 578 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 PAPPA2Q9BXP8 1791 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 COL11A1P12107 1806 aaPredicted RBP11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 FOSP01100 380 aaPredicted RBP11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 HOXA13P31271 388 aaPredicted RBP11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 CIITAP33076 1130 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 SPIRE1Q08AE8 756 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 PAK1Q13153 545 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 KIF4BQ2VIQ3 1234 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 HYIQ5T013 277 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 CCDC150Q8NCX0 1101 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 CHURC1Q8WUH1 139 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 NELFBQ8WX92 580 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 CALML4Q96GE6 196 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 RAB34Q9BZG1 259 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 GJA3Q9Y6H8 435 aa11.94□□□□□ -0.5
PRPF4B-209ENST00000494674 WDR90Q96KV7 1748 aa11.93□□□□□ -0.5
PRPF4B-209ENST00000494674 FAM86B1E9PN63 330 aa11.93□□□□□ -0.5
PRPF4B-209ENST00000494674 COBLO75128 1261 aa11.93□□□□□ -0.5
PRPF4B-209ENST00000494674 FAM86B2P0C5J1 330 aa11.93□□□□□ -0.5
PRPF4B-209ENST00000494674 INPP5BP32019 993 aa11.93□□□□□ -0.5
PRPF4B-209ENST00000494674 NR1I3Q14994 352 aa11.93□□□□□ -0.5
PRPF4B-209ENST00000494674 Q4G0T1 1027 aa11.93□□□□□ -0.5
PRPF4B-209ENST00000494674 CNNM4Q6P4Q7 775 aa11.93□□□□□ -0.5
PRPF4B-209ENST00000494674 FAM160B2Q86V87 743 aa11.93□□□□□ -0.5
PRPF4B-209ENST00000494674 SNX29Q8TEQ0 813 aa11.93□□□□□ -0.5
PRPF4B-209ENST00000494674 RAD54LQ92698 747 aa11.93□□□□□ -0.5
PRPF4B-209ENST00000494674 ZNF341Q9BYN7 854 aa11.93□□□□□ -0.5
PRPF4B-209ENST00000494674 DEFB129Q9H1M3 183 aa11.93□□□□□ -0.5
PRPF4B-209ENST00000494674 FEM1BQ9UK73 627 aa11.93□□□□□ -0.5
PRPF4B-209ENST00000494674 SSC5DA1L4H1 1573 aa11.93□□□□□ -0.5
PRPF4B-209ENST00000494674 MYMKA6NI61 221 aa11.92□□□□□ -0.5
PRPF4B-209ENST00000494674 CYP3A4P08684 503 aa11.92□□□□□ -0.5
PRPF4B-209ENST00000494674 SKILP12757 684 aa11.92□□□□□ -0.5
PRPF4B-209ENST00000494674 PBX1P40424 430 aa11.92□□□□□ -0.5
PRPF4B-209ENST00000494674 PMS1P54277 932 aaKnown RBP11.92□□□□□ -0.5
PRPF4B-209ENST00000494674 MCM6Q14566 821 aa11.92□□□□□ -0.5
PRPF4B-209ENST00000494674 CCDC174Q6PII3 467 aa11.92□□□□□ -0.5
PRPF4B-209ENST00000494674 IRF2BP1Q8IU81 584 aa11.92□□□□□ -0.5
PRPF4B-209ENST00000494674 TBC1D5Q92609 795 aa11.92□□□□□ -0.5
PRPF4B-209ENST00000494674 LARP4BQ92615 738 aaKnown RBP11.92□□□□□ -0.5
PRPF4B-209ENST00000494674 KIFC2Q96AC6 838 aa11.92□□□□□ -0.5
PRPF4B-209ENST00000494674 KIAA1683Q9H0B3 1180 aa11.92□□□□□ -0.5
PRPF4B-209ENST00000494674 GINM1Q9NU53 330 aa11.92□□□□□ -0.5
PRPF4B-209ENST00000494674 ADD3Q9UEY8 706 aaKnown RBP11.92□□□□□ -0.5
PRPF4B-209ENST00000494674 PCDHA12Q9UN75 941 aa11.92□□□□□ -0.5
PRPF4B-209ENST00000494674 MAPK8IP1Q9UQF2 711 aa11.92□□□□□ -0.5
PRPF4B-209ENST00000494674 ZNF536O15090 1300 aa11.92□□□□□ -0.5
PRPF4B-209ENST00000494674 IGLV3-22A0A075B6J6 115 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 TRIM49BA6NDI0 452 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 SPDYE3A6NKU9 549 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 TBX3O15119 743 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 CTNND1O60716 968 aaKnown RBP11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 CDK11BP21127 795 aaKnown RBP11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 ASIC1P78348 528 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 TRAF1Q13077 416 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 COBLL1Q53SF7 1204 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 NBPF12Q5TAG4 269 aaPredicted RBP11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 KRT79Q5XKE5 535 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 PPP4R3CPQ6ZMV5 832 aa11.91□□□□□ -0.5
PRPF4B-209ENST00000494674 TRPM4Q8TD43 1214 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 196.4 ms