RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 PDE4AP27815 886 aa14.5□□□□□ -0.09
COL6A1-205ENST00000492851 CYP2C18P33260 490 aa14.5□□□□□ -0.09
COL6A1-205ENST00000492851 TMEM63BQ5T3F8 832 aa14.5□□□□□ -0.09
COL6A1-205ENST00000492851 ARHGEF16Q5VV41 709 aa14.5□□□□□ -0.09
COL6A1-205ENST00000492851 ZNF365Q70YC5 407 aa14.5□□□□□ -0.09
COL6A1-205ENST00000492851 C16orf59Q7L2K0 433 aa14.5□□□□□ -0.09
COL6A1-205ENST00000492851 NCOA7Q8NI08 942 aa14.5□□□□□ -0.09
COL6A1-205ENST00000492851 SYTL5Q8TDW5 730 aaPredicted RBP14.5□□□□□ -0.09
COL6A1-205ENST00000492851 HERVK_113Q902F9 699 aa14.5□□□□□ -0.09
COL6A1-205ENST00000492851 TRPV6Q9H1D0 765 aa14.5□□□□□ -0.09
COL6A1-205ENST00000492851 CPVLQ9H3G5 476 aa14.5□□□□□ -0.09
COL6A1-205ENST00000492851 PALM3A6NDB9 673 aaPredicted RBP14.49□□□□□ -0.09
COL6A1-205ENST00000492851 ZBTB5O15062 677 aa14.49□□□□□ -0.09
COL6A1-205ENST00000492851 GH1P01241 217 aa14.49□□□□□ -0.09
COL6A1-205ENST00000492851 DNAJB2P25686 324 aa14.49□□□□□ -0.09
COL6A1-205ENST00000492851 PSMC6P62333 389 aa14.49□□□□□ -0.09
COL6A1-205ENST00000492851 SEC23AQ15436 765 aa14.49□□□□□ -0.09
COL6A1-205ENST00000492851 RAB30Q15771 203 aa14.49□□□□□ -0.09
COL6A1-205ENST00000492851 KCNV1Q6PIU1 500 aa14.49□□□□□ -0.09
COL6A1-205ENST00000492851 TIFAQ96CG3 184 aa14.49□□□□□ -0.09
COL6A1-205ENST00000492851 TAAR1Q96RJ0 339 aa14.49□□□□□ -0.09
COL6A1-205ENST00000492851 NOC4LQ9BVI4 516 aaKnown RBP14.49□□□□□ -0.09
COL6A1-205ENST00000492851 TTYH1Q9H313 450 aaPredicted RBP14.49□□□□□ -0.09
COL6A1-205ENST00000492851 MSRAQ9UJ68 235 aa14.49□□□□□ -0.09
COL6A1-205ENST00000492851 IFIT3O14879 490 aaKnown RBP14.48□□□□□ -0.09
COL6A1-205ENST00000492851 CFBP00751 764 aa14.48□□□□□ -0.09
COL6A1-205ENST00000492851 CYP21A2P08686 494 aa14.48□□□□□ -0.09
COL6A1-205ENST00000492851 ACRP10323 421 aa14.48□□□□□ -0.09
COL6A1-205ENST00000492851 FOSL2P15408 326 aa14.48□□□□□ -0.09
COL6A1-205ENST00000492851 CASTP20810 708 aaKnown RBP14.48□□□□□ -0.09
COL6A1-205ENST00000492851 RFC2P35250 354 aa14.48□□□□□ -0.09
COL6A1-205ENST00000492851 GHRHRQ02643 423 aa14.48□□□□□ -0.09
COL6A1-205ENST00000492851 CCDC62Q6P9F0 684 aa14.48□□□□□ -0.09
COL6A1-205ENST00000492851 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.48□□□□□ -0.09
COL6A1-205ENST00000492851 RETREG2Q8NC44 543 aa14.48□□□□□ -0.09
COL6A1-205ENST00000492851 MTMR8Q96EF0 704 aa14.48□□□□□ -0.09
COL6A1-205ENST00000492851 MTA3Q9BTC8 594 aa14.48□□□□□ -0.09
COL6A1-205ENST00000492851 ZNF576Q9H609 170 aa14.48□□□□□ -0.09
COL6A1-205ENST00000492851 MAD2L2Q9UI95 211 aa14.48□□□□□ -0.09
COL6A1-205ENST00000492851 PCDHA1Q9Y5I3 950 aa14.48□□□□□ -0.09
COL6A1-205ENST00000492851 PITPNM1O00562 1244 aa14.47□□□□□ -0.09
COL6A1-205ENST00000492851 SGSM2O43147 1006 aa14.47□□□□□ -0.09
COL6A1-205ENST00000492851 PTGS1P23219 599 aa14.47□□□□□ -0.09
COL6A1-205ENST00000492851 HSD17B4P51659 736 aa14.47□□□□□ -0.09
COL6A1-205ENST00000492851 CCL23P55773 120 aa14.47□□□□□ -0.09
COL6A1-205ENST00000492851 BFSP2Q13515 415 aa14.47□□□□□ -0.09
COL6A1-205ENST00000492851 LAMC2Q13753 1193 aa14.47□□□□□ -0.09
COL6A1-205ENST00000492851 WTAPQ15007 396 aa14.47□□□□□ -0.09
COL6A1-205ENST00000492851 NBPF20Q3BBV1 942 aa14.47□□□□□ -0.09
COL6A1-205ENST00000492851 FAM47CQ5HY64 1035 aa14.47□□□□□ -0.09
COL6A1-205ENST00000492851 SEPT14Q6ZU15 432 aa14.47□□□□□ -0.09
COL6A1-205ENST00000492851 CYB5R4Q7L1T6 521 aa14.47□□□□□ -0.09
COL6A1-205ENST00000492851 CATIPQ7Z7H3 387 aa14.47□□□□□ -0.09
COL6A1-205ENST00000492851 STAG2Q8N3U4 1231 aa14.47□□□□□ -0.09
COL6A1-205ENST00000492851 MAFAQ8NHW3 353 aaPredicted RBP14.47□□□□□ -0.09
COL6A1-205ENST00000492851 TBC1D5Q92609 795 aa14.47□□□□□ -0.09
COL6A1-205ENST00000492851 MAP4K1Q92918 833 aa14.47□□□□□ -0.09
COL6A1-205ENST00000492851 EMID1Q96A84 441 aaPredicted RBP14.47□□□□□ -0.09
COL6A1-205ENST00000492851 NOD1Q9Y239 953 aa14.47□□□□□ -0.09
COL6A1-205ENST00000492851 MCM3APO60318 1980 aa14.47□□□□□ -0.09
COL6A1-205ENST00000492851 E7EWF7 191 aa14.46□□□□□ -0.09
COL6A1-205ENST00000492851 NR3C2P08235 984 aa14.46□□□□□ -0.09
COL6A1-205ENST00000492851 TGFB3P10600 412 aa14.46□□□□□ -0.09
COL6A1-205ENST00000492851 ACTN1P12814 892 aa14.46□□□□□ -0.09
COL6A1-205ENST00000492851 GRM4Q14833 912 aa14.46□□□□□ -0.09
COL6A1-205ENST00000492851 DGKDQ16760 1214 aa14.46□□□□□ -0.09
COL6A1-205ENST00000492851 STOX1Q6ZVD7 989 aa14.46□□□□□ -0.09
COL6A1-205ENST00000492851 TMTC2Q8N394 836 aa14.46□□□□□ -0.09
COL6A1-205ENST00000492851 CCDC155Q8N6L0 562 aa14.46□□□□□ -0.09
COL6A1-205ENST00000492851 MYLIPQ8WY64 445 aa14.46□□□□□ -0.09
COL6A1-205ENST00000492851 MAP3K14Q99558 947 aa14.46□□□□□ -0.09
COL6A1-205ENST00000492851 KATNAL1Q9BW62 490 aa14.46□□□□□ -0.09
COL6A1-205ENST00000492851 IL25Q9H293 177 aa14.46□□□□□ -0.09
COL6A1-205ENST00000492851 RIOX1Q9H6W3 641 aa14.46□□□□□ -0.09
COL6A1-205ENST00000492851 PXMP2Q9NR77 195 aa14.46□□□□□ -0.09
COL6A1-205ENST00000492851 TRMT13Q9NUP7 481 aaKnown RBP14.46□□□□□ -0.09
COL6A1-205ENST00000492851 DDX41Q9UJV9 622 aaKnown RBP14.46□□□□□ -0.09
COL6A1-205ENST00000492851 MRVI1Q9Y6F6 885 aa14.46□□□□□ -0.09
COL6A1-205ENST00000492851 SLC4A7Q9Y6M7 1214 aa14.46□□□□□ -0.09
COL6A1-205ENST00000492851 LAMA4Q16363 1823 aa14.45□□□□□ -0.1
COL6A1-205ENST00000492851 PNMA6FA0A0J9YX94 578 aa14.45□□□□□ -0.1
COL6A1-205ENST00000492851 LRRC37A2A6NM11 1700 aa14.45□□□□□ -0.1
COL6A1-205ENST00000492851 PARNO95453 639 aaKnown RBP14.45□□□□□ -0.1
COL6A1-205ENST00000492851 EIF2AK2P19525 551 aaKnown RBP14.45□□□□□ -0.1
COL6A1-205ENST00000492851 SMARCA1P28370 1054 aa14.45□□□□□ -0.1
COL6A1-205ENST00000492851 KIF5BP33176 963 aa14.45□□□□□ -0.1
COL6A1-205ENST00000492851 PTH1RQ03431 593 aa14.45□□□□□ -0.1
COL6A1-205ENST00000492851 LY6KQ17RY6 165 aa14.45□□□□□ -0.1
COL6A1-205ENST00000492851 OTOP2Q7RTS6 562 aa14.45□□□□□ -0.1
COL6A1-205ENST00000492851 SESTD1Q86VW0 696 aa14.45□□□□□ -0.1
COL6A1-205ENST00000492851 AFG1LQ8WV93 481 aa14.45□□□□□ -0.1
COL6A1-205ENST00000492851 COPS5Q92905 334 aa14.45□□□□□ -0.1
COL6A1-205ENST00000492851 PBX4Q9BYU1 374 aa14.45□□□□□ -0.1
COL6A1-205ENST00000492851 COL20A1Q9P218 1284 aa14.45□□□□□ -0.1
COL6A1-205ENST00000492851 COL6A3P12111 3177 aa14.44□□□□□ -0.1
COL6A1-205ENST00000492851 GCOM1H8Y6P7 765 aaPredicted RBP14.44□□□□□ -0.1
COL6A1-205ENST00000492851 PPFIA4O75335 1185 aa14.44□□□□□ -0.1
COL6A1-205ENST00000492851 ARIH2O95376 493 aa14.44□□□□□ -0.1
COL6A1-205ENST00000492851 MMP3P08254 477 aa14.44□□□□□ -0.1
COL6A1-205ENST00000492851 POLR2MP0CAP2 368 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms