RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 SOX1O00570 391 aaPredicted RBP27.46■■□□□ 1.99
CTDSP1-211ENST00000492545 CDC45O75419 566 aa27.46■■□□□ 1.99
CTDSP1-211ENST00000492545 LIFRP42702 1097 aa27.46■■□□□ 1.99
CTDSP1-211ENST00000492545 GNAQP50148 359 aa27.46■■□□□ 1.99
CTDSP1-211ENST00000492545 TTLL4Q14679 1199 aa27.46■■□□□ 1.99
CTDSP1-211ENST00000492545 STXBP2Q15833 593 aa27.46■■□□□ 1.99
CTDSP1-211ENST00000492545 CTCFLQ8NI51 663 aaPredicted RBP27.46■■□□□ 1.99
CTDSP1-211ENST00000492545 TAAR1Q96RJ0 339 aa27.46■■□□□ 1.99
CTDSP1-211ENST00000492545 POLR3EQ9NVU0 708 aa27.46■■□□□ 1.99
CTDSP1-211ENST00000492545 KPNA6O60684 536 aa27.45■■□□□ 1.98
CTDSP1-211ENST00000492545 CFBP00751 764 aa27.45■■□□□ 1.98
CTDSP1-211ENST00000492545 ARHGEF16Q5VV41 709 aa27.45■■□□□ 1.98
CTDSP1-211ENST00000492545 ZNF654Q8IZM8 581 aa27.45■■□□□ 1.98
CTDSP1-211ENST00000492545 COL20A1Q9P218 1284 aa27.45■■□□□ 1.98
CTDSP1-211ENST00000492545 TBX21Q9UL17 535 aa27.45■■□□□ 1.98
CTDSP1-211ENST00000492545 LRRC37A2A6NM11 1700 aa27.44■■□□□ 1.98
CTDSP1-211ENST00000492545 CYTH3O43739 400 aa27.44■■□□□ 1.98
CTDSP1-211ENST00000492545 PPP1R11O60927 126 aaPredicted RBP27.44■■□□□ 1.98
CTDSP1-211ENST00000492545 EIF3JO75822 258 aaKnown RBP27.44■■□□□ 1.98
CTDSP1-211ENST00000492545 TIMP1P01033 207 aa27.44■■□□□ 1.98
CTDSP1-211ENST00000492545 CALM1P0DP23 149 aa27.44■■□□□ 1.98
CTDSP1-211ENST00000492545 CALM2P0DP24 149 aa27.44■■□□□ 1.98
CTDSP1-211ENST00000492545 CALM3P0DP25 149 aa27.44■■□□□ 1.98
CTDSP1-211ENST00000492545 TXNP10599 105 aaKnown RBP27.44■■□□□ 1.98
CTDSP1-211ENST00000492545 ITGA7Q13683 1181 aa27.44■■□□□ 1.98
CTDSP1-211ENST00000492545 TMEM63BQ5T3F8 832 aa27.44■■□□□ 1.98
CTDSP1-211ENST00000492545 SKAP1Q86WV1 359 aa27.44■■□□□ 1.98
CTDSP1-211ENST00000492545 HOMER1Q86YM7 354 aa27.44■■□□□ 1.98
CTDSP1-211ENST00000492545 FAM126BQ8IXS8 530 aa27.44■■□□□ 1.98
CTDSP1-211ENST00000492545 OR6J1Q8NGC5 347 aa27.44■■□□□ 1.98
CTDSP1-211ENST00000492545 LRCH3Q96II8 777 aa27.44■■□□□ 1.98
CTDSP1-211ENST00000492545 PIGSQ96S52 555 aa27.44■■□□□ 1.98
CTDSP1-211ENST00000492545 CCDC69A6NI79 296 aa27.43■■□□□ 1.98
CTDSP1-211ENST00000492545 SH2B2O14492 632 aaPredicted RBP27.43■■□□□ 1.98
CTDSP1-211ENST00000492545 OPLAHO14841 1288 aa27.43■■□□□ 1.98
CTDSP1-211ENST00000492545 SLC35G1Q2M3R5 365 aa27.43■■□□□ 1.98
CTDSP1-211ENST00000492545 NFXL1Q6ZNB6 911 aa27.43■■□□□ 1.98
CTDSP1-211ENST00000492545 SPZ1Q9BXG8 430 aa27.43■■□□□ 1.98
CTDSP1-211ENST00000492545 GPHNQ9NQX3 736 aaPredicted RBP27.43■■□□□ 1.98
CTDSP1-211ENST00000492545 ITGB8P26012 769 aa27.42■■□□□ 1.98
CTDSP1-211ENST00000492545 TSGA10IPQ3SY00 556 aa27.42■■□□□ 1.98
CTDSP1-211ENST00000492545 PXMP2Q9NR77 195 aa27.42■■□□□ 1.98
CTDSP1-211ENST00000492545 A6NJR5 290 aa27.41■■□□□ 1.98
CTDSP1-211ENST00000492545 GCOM1H8Y6P7 765 aaPredicted RBP27.41■■□□□ 1.98
CTDSP1-211ENST00000492545 CD4P01730 458 aa27.41■■□□□ 1.98
CTDSP1-211ENST00000492545 NEFLP07196 543 aa27.41■■□□□ 1.98
CTDSP1-211ENST00000492545 NR3C2P08235 984 aa27.41■■□□□ 1.98
CTDSP1-211ENST00000492545 POLR2MP0CAP2 368 aa27.41■■□□□ 1.98
CTDSP1-211ENST00000492545 FPGSQ05932 587 aa27.41■■□□□ 1.98
CTDSP1-211ENST00000492545 CCDC62Q6P9F0 684 aa27.41■■□□□ 1.98
CTDSP1-211ENST00000492545 LTBP2Q14767 1821 aa27.41■■□□□ 1.98
CTDSP1-211ENST00000492545 MYH6P13533 1939 aa27.4■■□□□ 1.98
CTDSP1-211ENST00000492545 PTGS1P23219 599 aa27.4■■□□□ 1.98
CTDSP1-211ENST00000492545 PURAQ00577 322 aaKnown RBP27.4■■□□□ 1.98
CTDSP1-211ENST00000492545 KRT32Q14532 448 aa27.4■■□□□ 1.98
CTDSP1-211ENST00000492545 SHHQ15465 462 aa27.4■■□□□ 1.98
CTDSP1-211ENST00000492545 MFSD5Q6N075 450 aa27.4■■□□□ 1.98
CTDSP1-211ENST00000492545 RRP36Q96EU6 259 aaKnown RBP27.4■■□□□ 1.98
CTDSP1-211ENST00000492545 NEK1Q96PY6 1258 aa27.4■■□□□ 1.98
CTDSP1-211ENST00000492545 MTG1Q9BT17 334 aaPredicted RBP27.4■■□□□ 1.98
CTDSP1-211ENST00000492545 SLC12A7Q9Y666 1083 aa27.4■■□□□ 1.98
CTDSP1-211ENST00000492545 EIF2AK2P19525 551 aaKnown RBP27.39■■□□□ 1.98
CTDSP1-211ENST00000492545 SEPT14Q6ZU15 432 aa27.39■■□□□ 1.98
CTDSP1-211ENST00000492545 SGMS1Q86VZ5 419 aa27.39■■□□□ 1.98
CTDSP1-211ENST00000492545 GRIN2DO15399 1336 aa27.39■■□□□ 1.97
CTDSP1-211ENST00000492545 KCNV1Q6PIU1 500 aa27.38■■□□□ 1.97
CTDSP1-211ENST00000492545 PDCD2LQ9BRP1 358 aa27.38■■□□□ 1.97
CTDSP1-211ENST00000492545 SEC63Q9UGP8 760 aaKnown RBP27.38■■□□□ 1.97
CTDSP1-211ENST00000492545 GH1P01241 217 aa27.37■■□□□ 1.97
CTDSP1-211ENST00000492545 SYNE3Q6ZMZ3 975 aa27.37■■□□□ 1.97
CTDSP1-211ENST00000492545 VSIG10LQ86VR7 867 aa27.37■■□□□ 1.97
CTDSP1-211ENST00000492545 TMEM199Q8N511 208 aa27.37■■□□□ 1.97
CTDSP1-211ENST00000492545 MYL10Q9BUA6 226 aa27.37■■□□□ 1.97
CTDSP1-211ENST00000492545 BAZ2BQ9UIF8 2168 aaKnown RBP27.36■■□□□ 1.97
CTDSP1-211ENST00000492545 ARIH2O95376 493 aa27.36■■□□□ 1.97
CTDSP1-211ENST00000492545 MYL3P08590 195 aa27.36■■□□□ 1.97
CTDSP1-211ENST00000492545 HMGB1P09429 215 aaKnown RBP27.36■■□□□ 1.97
CTDSP1-211ENST00000492545 SUPT20HL2P0C7V6 817 aa27.36■■□□□ 1.97
CTDSP1-211ENST00000492545 HOXA13P31271 388 aaPredicted RBP27.36■■□□□ 1.97
CTDSP1-211ENST00000492545 PPIGQ13427 754 aaKnown RBP eCLIP27.36■■□□□ 1.97
CTDSP1-211ENST00000492545 DHX32Q7L7V1 743 aaKnown RBP27.36■■□□□ 1.97
CTDSP1-211ENST00000492545 DDX41Q9UJV9 622 aaKnown RBP27.36■■□□□ 1.97
CTDSP1-211ENST00000492545 PSMC6P62333 389 aa27.35■■□□□ 1.97
CTDSP1-211ENST00000492545 C9orf50Q5SZB4 431 aa27.35■■□□□ 1.97
CTDSP1-211ENST00000492545 FAM109BQ6ICB4 259 aaPredicted RBP27.35■■□□□ 1.97
CTDSP1-211ENST00000492545 FANCBQ8NB91 859 aa27.35■■□□□ 1.97
CTDSP1-211ENST00000492545 COPS5Q92905 334 aa27.35■■□□□ 1.97
CTDSP1-211ENST00000492545 EMID1Q96A84 441 aaPredicted RBP27.35■■□□□ 1.97
CTDSP1-211ENST00000492545 ALDH8A1Q9H2A2 487 aaPredicted RBP27.35■■□□□ 1.97
CTDSP1-211ENST00000492545 LAMA2P24043 3122 aaKnown RBP27.35■■□□□ 1.97
CTDSP1-211ENST00000492545 TGFB3P10600 412 aa27.34■■□□□ 1.97
CTDSP1-211ENST00000492545 EXOSC10Q01780 885 aaKnown RBP27.34■■□□□ 1.97
CTDSP1-211ENST00000492545 PTPN11Q06124 597 aaPredicted RBP27.34■■□□□ 1.97
CTDSP1-211ENST00000492545 LAMC2Q13753 1193 aa27.34■■□□□ 1.97
CTDSP1-211ENST00000492545 LY6KQ17RY6 165 aa27.34■■□□□ 1.97
CTDSP1-211ENST00000492545 NFRKBQ6P4R8 1299 aa27.34■■□□□ 1.97
CTDSP1-211ENST00000492545 SRBD1Q8N5C6 995 aaKnown RBP27.34■■□□□ 1.97
CTDSP1-211ENST00000492545 MRVI1Q9Y6F6 885 aa27.34■■□□□ 1.97
CTDSP1-211ENST00000492545 CCND2P30279 289 aa27.33■■□□□ 1.97
CTDSP1-211ENST00000492545 ARHGAP1Q07960 439 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms