RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 SLC3A2P08195 630 aaKnown RBP15.64■□□□□ 0.09
USF1-206ENST00000491629 FGRP09769 529 aa15.64■□□□□ 0.09
USF1-206ENST00000491629 RFC2P35250 354 aa15.64■□□□□ 0.09
USF1-206ENST00000491629 CPT1AP50416 773 aa15.64■□□□□ 0.09
USF1-206ENST00000491629 CCDC96Q2M329 555 aa15.64■□□□□ 0.09
USF1-206ENST00000491629 FAM47CQ5HY64 1035 aa15.64■□□□□ 0.09
USF1-206ENST00000491629 SYDE2Q5VT97 1194 aa15.64■□□□□ 0.09
USF1-206ENST00000491629 NFRKBQ6P4R8 1299 aa15.64■□□□□ 0.09
USF1-206ENST00000491629 DCAF4Q8WV16 495 aa15.64■□□□□ 0.09
USF1-206ENST00000491629 CHMP4BQ9H444 224 aaKnown RBP15.64■□□□□ 0.09
USF1-206ENST00000491629 ADD3Q9UEY8 706 aaKnown RBP15.64■□□□□ 0.09
USF1-206ENST00000491629 ANAPC4Q9UJX5 808 aa15.64■□□□□ 0.09
USF1-206ENST00000491629 MYO7AQ13402 2215 aa15.64■□□□□ 0.09
USF1-206ENST00000491629 FRMPD2Q68DX3 1309 aaPredicted RBP15.64■□□□□ 0.09
USF1-206ENST00000491629 LOC102724159A0A0B4J2E5 919 aa15.63■□□□□ 0.09
USF1-206ENST00000491629 ORC4O43929 436 aa15.63■□□□□ 0.09
USF1-206ENST00000491629 RANBP6O60518 1105 aaKnown RBP15.63■□□□□ 0.09
USF1-206ENST00000491629 ACTN1P12814 892 aa15.63■□□□□ 0.09
USF1-206ENST00000491629 CALML3P27482 149 aa15.63■□□□□ 0.09
USF1-206ENST00000491629 PWP2Q15269 919 aaKnown RBP15.63■□□□□ 0.09
USF1-206ENST00000491629 GPATCH3Q96I76 525 aa15.63■□□□□ 0.09
USF1-206ENST00000491629 TMEM47Q9BQJ4 181 aa15.63■□□□□ 0.09
USF1-206ENST00000491629 COG5Q9UP83 839 aa15.63■□□□□ 0.09
USF1-206ENST00000491629 TTC41PQ6P2S7 1318 aa15.63■□□□□ 0.09
USF1-206ENST00000491629 NLRC5Q86WI3 1866 aa15.63■□□□□ 0.09
USF1-206ENST00000491629 WDR5P61964 334 aaKnown RBP15.62■□□□□ 0.09
USF1-206ENST00000491629 RPS6P62753 249 aaKnown RBP15.62■□□□□ 0.09
USF1-206ENST00000491629 DEFB103AP81534 67 aa15.62■□□□□ 0.09
USF1-206ENST00000491629 DHX38Q92620 1227 aaKnown RBP15.62■□□□□ 0.09
USF1-206ENST00000491629 HLA-CQ95604 372 aa15.62■□□□□ 0.09
USF1-206ENST00000491629 FSD1Q9BTV5 496 aa15.62■□□□□ 0.09
USF1-206ENST00000491629 FTOQ9C0B1 505 aaKnown RBP eCLIP15.62■□□□□ 0.09
USF1-206ENST00000491629 GPCPD1Q9NPB8 672 aa15.62■□□□□ 0.09
USF1-206ENST00000491629 RCAN3Q9UKA8 241 aa15.62■□□□□ 0.09
USF1-206ENST00000491629 SALL3Q9BXA9 1300 aa15.62■□□□□ 0.09
USF1-206ENST00000491629 PTPN11Q06124 597 aaPredicted RBP15.61■□□□□ 0.09
USF1-206ENST00000491629 PPP2R5BQ15173 497 aa15.61■□□□□ 0.09
USF1-206ENST00000491629 PPP4R3BQ5MIZ7 849 aa15.61■□□□□ 0.09
USF1-206ENST00000491629 GDF6Q6KF10 455 aaPredicted RBP15.61■□□□□ 0.09
USF1-206ENST00000491629 RNF207Q6ZRF8 634 aa15.61■□□□□ 0.09
USF1-206ENST00000491629 GDPD5Q8WTR4 605 aa15.61■□□□□ 0.09
USF1-206ENST00000491629 KAT2BQ92831 832 aa15.61■□□□□ 0.09
USF1-206ENST00000491629 GPHNQ9NQX3 736 aaPredicted RBP15.61■□□□□ 0.09
USF1-206ENST00000491629 FAM86C2PA6NEL3 165 aa15.6■□□□□ 0.09
USF1-206ENST00000491629 NKRFO15226 690 aaKnown RBP eCLIP15.6■□□□□ 0.09
USF1-206ENST00000491629 TXNP10599 105 aaKnown RBP15.6■□□□□ 0.09
USF1-206ENST00000491629 PDHBP11177 359 aa15.6■□□□□ 0.09
USF1-206ENST00000491629 PDE4DQ08499 809 aa15.6■□□□□ 0.09
USF1-206ENST00000491629 CCDC62Q6P9F0 684 aa15.6■□□□□ 0.09
USF1-206ENST00000491629 RETREG2Q8NC44 543 aa15.6■□□□□ 0.09
USF1-206ENST00000491629 SCFD2Q8WU76 684 aa15.6■□□□□ 0.09
USF1-206ENST00000491629 TBC1D5Q92609 795 aa15.6■□□□□ 0.09
USF1-206ENST00000491629 ARIH1Q9Y4X5 557 aaPredicted RBP15.6■□□□□ 0.09
USF1-206ENST00000491629 LAMA4Q16363 1823 aa15.59■□□□□ 0.09
USF1-206ENST00000491629 DOCK5Q9H7D0 1870 aa15.59■□□□□ 0.09
USF1-206ENST00000491629 GPR37L1O60883 481 aa15.59■□□□□ 0.09
USF1-206ENST00000491629 NBNO60934 754 aa15.59■□□□□ 0.09
USF1-206ENST00000491629 BAIAP3O94812 1187 aa15.59■□□□□ 0.09
USF1-206ENST00000491629 TOP1P11387 765 aaKnown RBP15.59■□□□□ 0.09
USF1-206ENST00000491629 ZNF543Q08ER8 600 aa15.59■□□□□ 0.09
USF1-206ENST00000491629 BFSP2Q13515 415 aa15.59■□□□□ 0.09
USF1-206ENST00000491629 ALX1Q15699 326 aa15.59■□□□□ 0.09
USF1-206ENST00000491629 PTGISQ16647 500 aa15.59■□□□□ 0.09
USF1-206ENST00000491629 LRRFIP1Q32MZ4 808 aaKnown RBP15.59■□□□□ 0.09
USF1-206ENST00000491629 TMEM31Q5JXX7 168 aa15.59■□□□□ 0.09
USF1-206ENST00000491629 TRAF7Q6Q0C0 670 aa15.59■□□□□ 0.09
USF1-206ENST00000491629 AFG1LQ8WV93 481 aa15.59■□□□□ 0.09
USF1-206ENST00000491629 CPVLQ9H3G5 476 aa15.59■□□□□ 0.09
USF1-206ENST00000491629 PCDHB15Q9Y5E8 787 aa15.59■□□□□ 0.09
USF1-206ENST00000491629 KPNA6O60684 536 aa15.58■□□□□ 0.08
USF1-206ENST00000491629 CXCL10P02778 98 aa15.58■□□□□ 0.08
USF1-206ENST00000491629 MMP3P08254 477 aa15.58■□□□□ 0.08
USF1-206ENST00000491629 SNHG28P0DPA3 235 aa15.58■□□□□ 0.08
USF1-206ENST00000491629 CHMP4BP1P59074 171 aa15.58■□□□□ 0.08
USF1-206ENST00000491629 ARHGAP1Q07960 439 aa15.58■□□□□ 0.08
USF1-206ENST00000491629 LY6KQ17RY6 165 aa15.58■□□□□ 0.08
USF1-206ENST00000491629 DNERQ8NFT8 737 aa15.58■□□□□ 0.08
USF1-206ENST00000491629 WNT8BQ93098 351 aa15.58■□□□□ 0.08
USF1-206ENST00000491629 SUGCTQ9HAC7 445 aa15.58■□□□□ 0.08
USF1-206ENST00000491629 TCP11L1Q9NUJ3 509 aa15.58■□□□□ 0.08
USF1-206ENST00000491629 COL20A1Q9P218 1284 aa15.58■□□□□ 0.08
USF1-206ENST00000491629 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.57■□□□□ 0.08
USF1-206ENST00000491629 KIF28PB7ZC32 967 aa15.57■□□□□ 0.08
USF1-206ENST00000491629 FGAP02671 866 aa15.57■□□□□ 0.08
USF1-206ENST00000491629 SELPP16109 830 aa15.57■□□□□ 0.08
USF1-206ENST00000491629 RBL2Q08999 1139 aa15.57■□□□□ 0.08
USF1-206ENST00000491629 MBTPS1Q14703 1052 aa15.57■□□□□ 0.08
USF1-206ENST00000491629 SESTD1Q86VW0 696 aa15.57■□□□□ 0.08
USF1-206ENST00000491629 AFAP1L1Q8TED9 768 aa15.57■□□□□ 0.08
USF1-206ENST00000491629 MTUS1Q9ULD2 1270 aa15.57■□□□□ 0.08
USF1-206ENST00000491629 WDR19Q8NEZ3 1342 aa15.57■□□□□ 0.08
USF1-206ENST00000491629 RAD50Q92878 1312 aa15.57■□□□□ 0.08
USF1-206ENST00000491629 ZNF318Q5VUA4 2279 aa15.57■□□□□ 0.08
USF1-206ENST00000491629 LINC01553A4QN01 128 aa15.56■□□□□ 0.08
USF1-206ENST00000491629 PI4K2BG5E9Z4 385 aa15.56■□□□□ 0.08
USF1-206ENST00000491629 GJB5O95377 273 aa15.56■□□□□ 0.08
USF1-206ENST00000491629 CKBP12277 381 aa15.56■□□□□ 0.08
USF1-206ENST00000491629 MX1P20591 662 aa15.56■□□□□ 0.08
USF1-206ENST00000491629 ERVK-21P61565 698 aa15.56■□□□□ 0.08
USF1-206ENST00000491629 HIC1Q14526 733 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms