RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 BADQ92934 168 aa20.23■□□□□ 0.83
SEC13-218ENST00000490283 TRIM43Q96BQ3 446 aaPredicted RBP20.23■□□□□ 0.83
SEC13-218ENST00000490283 TAAR1Q96RJ0 339 aa20.23■□□□□ 0.83
SEC13-218ENST00000490283 LZTS2Q9BRK4 669 aa20.23■□□□□ 0.83
SEC13-218ENST00000490283 SEZ6LQ9BYH1 1024 aa20.23■□□□□ 0.83
SEC13-218ENST00000490283 GPHNQ9NQX3 736 aaPredicted RBP20.23■□□□□ 0.83
SEC13-218ENST00000490283 POLR3EQ9NVU0 708 aa20.23■□□□□ 0.83
SEC13-218ENST00000490283 LIFRP42702 1097 aa20.22■□□□□ 0.83
SEC13-218ENST00000490283 LRIT3Q3SXY7 679 aa20.22■□□□□ 0.83
SEC13-218ENST00000490283 SYNE3Q6ZMZ3 975 aa20.22■□□□□ 0.83
SEC13-218ENST00000490283 SH3RF1Q7Z6J0 888 aa20.22■□□□□ 0.83
SEC13-218ENST00000490283 RRP36Q96EU6 259 aaKnown RBP20.22■□□□□ 0.83
SEC13-218ENST00000490283 PCDH10Q9P2E7 1040 aa20.22■□□□□ 0.83
SEC13-218ENST00000490283 SEC63Q9UGP8 760 aaKnown RBP20.22■□□□□ 0.83
SEC13-218ENST00000490283 SLC12A7Q9Y666 1083 aa20.22■□□□□ 0.83
SEC13-218ENST00000490283 LCTP09848 1927 aa20.21■□□□□ 0.83
SEC13-218ENST00000490283 KIAA0355O15063 1070 aa20.21■□□□□ 0.83
SEC13-218ENST00000490283 TXNP10599 105 aaKnown RBP20.21■□□□□ 0.83
SEC13-218ENST00000490283 EIF2AK2P19525 551 aaKnown RBP20.21■□□□□ 0.83
SEC13-218ENST00000490283 HSD17B4P51659 736 aa20.21■□□□□ 0.83
SEC13-218ENST00000490283 FAAP100Q0VG06 881 aa20.21■□□□□ 0.83
SEC13-218ENST00000490283 KRT32Q14532 448 aa20.21■□□□□ 0.83
SEC13-218ENST00000490283 MYL10Q9BUA6 226 aa20.21■□□□□ 0.83
SEC13-218ENST00000490283 GCOM1H8Y6P7 765 aaPredicted RBP20.2■□□□□ 0.82
SEC13-218ENST00000490283 CYTH3O43739 400 aa20.2■□□□□ 0.82
SEC13-218ENST00000490283 PPP1R11O60927 126 aaPredicted RBP20.2■□□□□ 0.82
SEC13-218ENST00000490283 POLR2MP0CAP2 368 aa20.2■□□□□ 0.82
SEC13-218ENST00000490283 CDK7P50613 346 aa20.2■□□□□ 0.82
SEC13-218ENST00000490283 ITGA7Q13683 1181 aa20.2■□□□□ 0.82
SEC13-218ENST00000490283 PIBF1Q8WXW3 757 aa20.2■□□□□ 0.82
SEC13-218ENST00000490283 NEK1Q96PY6 1258 aa20.2■□□□□ 0.82
SEC13-218ENST00000490283 SPZ1Q9BXG8 430 aa20.2■□□□□ 0.82
SEC13-218ENST00000490283 PXMP2Q9NR77 195 aa20.2■□□□□ 0.82
SEC13-218ENST00000490283 COL20A1Q9P218 1284 aa20.2■□□□□ 0.82
SEC13-218ENST00000490283 MYL3P08590 195 aa20.19■□□□□ 0.82
SEC13-218ENST00000490283 PTGS1P23219 599 aa20.19■□□□□ 0.82
SEC13-218ENST00000490283 SMARCA1P28370 1054 aa20.19■□□□□ 0.82
SEC13-218ENST00000490283 GHRHRQ02643 423 aa20.19■□□□□ 0.82
SEC13-218ENST00000490283 TMEM63BQ5T3F8 832 aa20.19■□□□□ 0.82
SEC13-218ENST00000490283 SEPT14Q6ZU15 432 aa20.19■□□□□ 0.82
SEC13-218ENST00000490283 SOX1O00570 391 aaPredicted RBP20.18■□□□□ 0.82
SEC13-218ENST00000490283 KPNA6O60684 536 aa20.18■□□□□ 0.82
SEC13-218ENST00000490283 EIF3JO75822 258 aaKnown RBP20.18■□□□□ 0.82
SEC13-218ENST00000490283 NR3C2P08235 984 aa20.18■□□□□ 0.82
SEC13-218ENST00000490283 HOXA13P31271 388 aaPredicted RBP20.18■□□□□ 0.82
SEC13-218ENST00000490283 FPGSQ05932 587 aa20.18■□□□□ 0.82
SEC13-218ENST00000490283 SLC35G1Q2M3R5 365 aa20.18■□□□□ 0.82
SEC13-218ENST00000490283 FAM126BQ8IXS8 530 aa20.18■□□□□ 0.82
SEC13-218ENST00000490283 LRCH3Q96II8 777 aa20.18■□□□□ 0.82
SEC13-218ENST00000490283 LRRC2Q9BYS8 371 aa20.18■□□□□ 0.82
SEC13-218ENST00000490283 OPLAHO14841 1288 aa20.17■□□□□ 0.82
SEC13-218ENST00000490283 TIMP1P01033 207 aa20.17■□□□□ 0.82
SEC13-218ENST00000490283 GH1P01241 217 aa20.17■□□□□ 0.82
SEC13-218ENST00000490283 HMGB1P09429 215 aaKnown RBP20.17■□□□□ 0.82
SEC13-218ENST00000490283 MYCLP12524 364 aaPredicted RBP20.17■□□□□ 0.82
SEC13-218ENST00000490283 GPR153Q6NV75 609 aa20.17■□□□□ 0.82
SEC13-218ENST00000490283 CUL5Q93034 780 aa20.17■□□□□ 0.82
SEC13-218ENST00000490283 MTG1Q9BT17 334 aaPredicted RBP20.17■□□□□ 0.82
SEC13-218ENST00000490283 TBX21Q9UL17 535 aa20.17■□□□□ 0.82
SEC13-218ENST00000490283 RANBP2P49792 3224 aaKnown RBP20.16■□□□□ 0.82
SEC13-218ENST00000490283 MYH6P13533 1939 aa20.16■□□□□ 0.82
SEC13-218ENST00000490283 REC8O95072 547 aa20.16■□□□□ 0.82
SEC13-218ENST00000490283 RXRAP19793 462 aa20.16■□□□□ 0.82
SEC13-218ENST00000490283 FGD1P98174 961 aa20.16■□□□□ 0.82
SEC13-218ENST00000490283 PURAQ00577 322 aaKnown RBP20.16■□□□□ 0.82
SEC13-218ENST00000490283 TSGA10IPQ3SY00 556 aa20.16■□□□□ 0.82
SEC13-218ENST00000490283 DHX32Q7L7V1 743 aaKnown RBP20.16■□□□□ 0.82
SEC13-218ENST00000490283 SGMS1Q86VZ5 419 aa20.16■□□□□ 0.82
SEC13-218ENST00000490283 FCHSD1Q86WN1 690 aa20.16■□□□□ 0.82
SEC13-218ENST00000490283 MICU3Q86XE3 530 aa20.16■□□□□ 0.82
SEC13-218ENST00000490283 SLC43A3Q8NBI5 491 aa20.16■□□□□ 0.82
SEC13-218ENST00000490283 COPS5Q92905 334 aa20.16■□□□□ 0.82
SEC13-218ENST00000490283 PDCD2LQ9BRP1 358 aa20.16■□□□□ 0.82
SEC13-218ENST00000490283 MRVI1Q9Y6F6 885 aa20.16■□□□□ 0.82
SEC13-218ENST00000490283 A6NJR5 290 aa20.15■□□□□ 0.82
SEC13-218ENST00000490283 CCND2P30279 289 aa20.15■□□□□ 0.82
SEC13-218ENST00000490283 PSMC6P62333 389 aa20.15■□□□□ 0.82
SEC13-218ENST00000490283 KCNV1Q6PIU1 500 aa20.15■□□□□ 0.82
SEC13-218ENST00000490283 TMEM199Q8N511 208 aa20.15■□□□□ 0.82
SEC13-218ENST00000490283 FANCBQ8NB91 859 aa20.15■□□□□ 0.82
SEC13-218ENST00000490283 LTBP2Q14767 1821 aa20.15■□□□□ 0.82
SEC13-218ENST00000490283 ARIH2O95376 493 aa20.14■□□□□ 0.81
SEC13-218ENST00000490283 PLEKHA8P1O95397 391 aa20.14■□□□□ 0.81
SEC13-218ENST00000490283 SUPT20HL2P0C7V6 817 aa20.14■□□□□ 0.81
SEC13-218ENST00000490283 ITGB8P26012 769 aa20.14■□□□□ 0.81
SEC13-218ENST00000490283 PPIGQ13427 754 aaKnown RBP eCLIP20.14■□□□□ 0.81
SEC13-218ENST00000490283 PGM5Q15124 567 aa20.14■□□□□ 0.81
SEC13-218ENST00000490283 SHHQ15465 462 aa20.14■□□□□ 0.81
SEC13-218ENST00000490283 LY6KQ17RY6 165 aa20.14■□□□□ 0.81
SEC13-218ENST00000490283 MFSD5Q6N075 450 aa20.14■□□□□ 0.81
SEC13-218ENST00000490283 CCDC62Q6P9F0 684 aa20.14■□□□□ 0.81
SEC13-218ENST00000490283 RAB11FIP4Q86YS3 637 aa20.14■□□□□ 0.81
SEC13-218ENST00000490283 SRBD1Q8N5C6 995 aaKnown RBP20.14■□□□□ 0.81
SEC13-218ENST00000490283 SMARCC2Q8TAQ2 1214 aa20.14■□□□□ 0.81
SEC13-218ENST00000490283 PPP1R12CQ9BZL4 782 aa20.14■□□□□ 0.81
SEC13-218ENST00000490283 RBM28Q9NW13 759 aaKnown RBP20.14■□□□□ 0.81
SEC13-218ENST00000490283 CD4P01730 458 aa20.13■□□□□ 0.81
SEC13-218ENST00000490283 FAM47CQ5HY64 1035 aa20.13■□□□□ 0.81
SEC13-218ENST00000490283 RNPC3Q96LT9 517 aaKnown RBP20.13■□□□□ 0.81
SEC13-218ENST00000490283 HIPK3Q9H422 1215 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 289.7 ms