RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 SCFD2Q8WU76 684 aa19.96■□□□□ 0.79
TOP3B-217ENST00000489581 FTOQ9C0B1 505 aaKnown RBP eCLIP19.96■□□□□ 0.79
TOP3B-217ENST00000489581 TANC1Q9C0D5 1861 aa19.96■□□□□ 0.79
TOP3B-217ENST00000489581 RAD50Q92878 1312 aa19.96■□□□□ 0.79
TOP3B-217ENST00000489581 A0A0D9SFI3 127 aa19.95■□□□□ 0.78
TOP3B-217ENST00000489581 IQCF3P0C7M6 154 aa19.95■□□□□ 0.78
TOP3B-217ENST00000489581 TXNP10599 105 aaKnown RBP19.95■□□□□ 0.78
TOP3B-217ENST00000489581 BMP1P13497 986 aa19.95■□□□□ 0.78
TOP3B-217ENST00000489581 EDNRBP24530 442 aa19.95■□□□□ 0.78
TOP3B-217ENST00000489581 ZNF543Q08ER8 600 aa19.95■□□□□ 0.78
TOP3B-217ENST00000489581 DNERQ8NFT8 737 aa19.95■□□□□ 0.78
TOP3B-217ENST00000489581 MPHOSPH6Q99547 160 aaKnown RBP19.95■□□□□ 0.78
TOP3B-217ENST00000489581 MTCH2Q9Y6C9 303 aa19.95■□□□□ 0.78
TOP3B-217ENST00000489581 MYH6P13533 1939 aa19.94■□□□□ 0.78
TOP3B-217ENST00000489581 EPOPA6NHQ4 379 aa19.94■□□□□ 0.78
TOP3B-217ENST00000489581 A6NJR5 290 aa19.94■□□□□ 0.78
TOP3B-217ENST00000489581 KPNA6O60684 536 aa19.94■□□□□ 0.78
TOP3B-217ENST00000489581 ARIH2O95376 493 aa19.94■□□□□ 0.78
TOP3B-217ENST00000489581 HSPD1P10809 573 aaKnown RBP19.94■□□□□ 0.78
TOP3B-217ENST00000489581 RFC2P35250 354 aa19.94■□□□□ 0.78
TOP3B-217ENST00000489581 KCNQ1P51787 676 aa19.94■□□□□ 0.78
TOP3B-217ENST00000489581 MCMDC2Q4G0Z9 681 aa19.94■□□□□ 0.78
TOP3B-217ENST00000489581 KRT40Q6A162 431 aa19.94■□□□□ 0.78
TOP3B-217ENST00000489581 SLC9A7Q96T83 725 aa19.94■□□□□ 0.78
TOP3B-217ENST00000489581 BRWD1Q9NSI6 2320 aa19.94■□□□□ 0.78
TOP3B-217ENST00000489581 PTPRSQ13332 1948 aa19.94■□□□□ 0.78
TOP3B-217ENST00000489581 XIRP2A4UGR9 3374 aa19.94■□□□□ 0.78
TOP3B-217ENST00000489581 TRANK1O15050 2925 aa19.93■□□□□ 0.78
TOP3B-217ENST00000489581 PITPNM1O00562 1244 aa19.93■□□□□ 0.78
TOP3B-217ENST00000489581 GTPBP6O43824 516 aaPredicted RBP19.93■□□□□ 0.78
TOP3B-217ENST00000489581 ARHGEF15O94989 841 aa19.93■□□□□ 0.78
TOP3B-217ENST00000489581 PDE1AP54750 535 aa19.93■□□□□ 0.78
TOP3B-217ENST00000489581 BFSP2Q13515 415 aa19.93■□□□□ 0.78
TOP3B-217ENST00000489581 USH1GQ495M9 461 aa19.93■□□□□ 0.78
TOP3B-217ENST00000489581 ZNF589Q86UQ0 364 aaPredicted RBP19.93■□□□□ 0.78
TOP3B-217ENST00000489581 PHOSPHO2Q8TCD6 241 aa19.93■□□□□ 0.78
TOP3B-217ENST00000489581 ARNTL2Q8WYA1 636 aa19.93■□□□□ 0.78
TOP3B-217ENST00000489581 PNMA2Q9UL42 364 aa19.93■□□□□ 0.78
TOP3B-217ENST00000489581 NOD1Q9Y239 953 aa19.93■□□□□ 0.78
TOP3B-217ENST00000489581 MYH7BA7E2Y1 1941 aa19.93■□□□□ 0.78
TOP3B-217ENST00000489581 WDR19Q8NEZ3 1342 aa19.93■□□□□ 0.78
TOP3B-217ENST00000489581 KIAA1217Q5T5P2 1943 aa19.92■□□□□ 0.78
TOP3B-217ENST00000489581 GOLGA8HP0CJ92 632 aa19.92■□□□□ 0.78
TOP3B-217ENST00000489581 POU3F3P20264 500 aaPredicted RBP19.92■□□□□ 0.78
TOP3B-217ENST00000489581 PTPN11Q06124 597 aaPredicted RBP19.92■□□□□ 0.78
TOP3B-217ENST00000489581 AAK1Q2M2I8 961 aa19.92■□□□□ 0.78
TOP3B-217ENST00000489581 MFSD6Q6ZSS7 791 aa19.92■□□□□ 0.78
TOP3B-217ENST00000489581 TTC14Q96N46 770 aa19.92■□□□□ 0.78
TOP3B-217ENST00000489581 UBA5Q9GZZ9 404 aa19.92■□□□□ 0.78
TOP3B-217ENST00000489581 CPVLQ9H3G5 476 aa19.92■□□□□ 0.78
TOP3B-217ENST00000489581 B4DLN1 442 aa19.91■□□□□ 0.78
TOP3B-217ENST00000489581 KIF28PB7ZC32 967 aa19.91■□□□□ 0.78
TOP3B-217ENST00000489581 SNHG28P0DPA3 235 aa19.91■□□□□ 0.78
TOP3B-217ENST00000489581 MRPL12P52815 198 aaKnown RBP19.91■□□□□ 0.78
TOP3B-217ENST00000489581 TAP1Q03518 808 aa19.91■□□□□ 0.78
TOP3B-217ENST00000489581 NMIQ13287 307 aaPredicted RBP19.91■□□□□ 0.78
TOP3B-217ENST00000489581 HERC6Q8IVU3 1022 aa19.91■□□□□ 0.78
TOP3B-217ENST00000489581 AFG1LQ8WV93 481 aa19.91■□□□□ 0.78
TOP3B-217ENST00000489581 TBC1D5Q92609 795 aa19.91■□□□□ 0.78
TOP3B-217ENST00000489581 ZKSCAN3Q9BRR0 538 aa19.91■□□□□ 0.78
TOP3B-217ENST00000489581 PTGISQ16647 500 aa19.9■□□□□ 0.78
TOP3B-217ENST00000489581 LY6KQ17RY6 165 aa19.9■□□□□ 0.78
TOP3B-217ENST00000489581 SEPT14Q6ZU15 432 aa19.9■□□□□ 0.78
TOP3B-217ENST00000489581 TBC1D10CQ8IV04 446 aa19.9■□□□□ 0.78
TOP3B-217ENST00000489581 ZMYM6O95789 1325 aa19.89■□□□□ 0.77
TOP3B-217ENST00000489581 GPATCH4Q5T3I0 446 aaKnown RBP19.89■□□□□ 0.77
TOP3B-217ENST00000489581 CCDC62Q6P9F0 684 aa19.89■□□□□ 0.77
TOP3B-217ENST00000489581 CHST3Q7LGC8 479 aa19.89■□□□□ 0.77
TOP3B-217ENST00000489581 SPRED2Q7Z698 418 aa19.89■□□□□ 0.77
TOP3B-217ENST00000489581 TAAR1Q96RJ0 339 aa19.89■□□□□ 0.77
TOP3B-217ENST00000489581 CCDC171Q6TFL3 1326 aa19.88■□□□□ 0.77
TOP3B-217ENST00000489581 TLL1O43897 1013 aa19.88■□□□□ 0.77
TOP3B-217ENST00000489581 MMP3P08254 477 aa19.88■□□□□ 0.77
TOP3B-217ENST00000489581 GDF6Q6KF10 455 aaPredicted RBP19.88■□□□□ 0.77
TOP3B-217ENST00000489581 RGS22Q8NE09 1264 aa19.88■□□□□ 0.77
TOP3B-217ENST00000489581 CTAGE1Q96RT6 745 aa19.88■□□□□ 0.77
TOP3B-217ENST00000489581 NEDD4P46934 1319 aa19.87■□□□□ 0.77
TOP3B-217ENST00000489581 TRIM6-TRIM34B2RNG4 842 aa19.87■□□□□ 0.77
TOP3B-217ENST00000489581 BAIAP3O94812 1187 aa19.87■□□□□ 0.77
TOP3B-217ENST00000489581 GH1P01241 217 aa19.87■□□□□ 0.77
TOP3B-217ENST00000489581 PCP11498 1178 aaKnown RBP19.87■□□□□ 0.77
TOP3B-217ENST00000489581 KCNJ6P48051 423 aa19.87■□□□□ 0.77
TOP3B-217ENST00000489581 GRB10Q13322 594 aa19.87■□□□□ 0.77
TOP3B-217ENST00000489581 GPNMBQ14956 572 aa19.87■□□□□ 0.77
TOP3B-217ENST00000489581 CDC37Q16543 378 aaPredicted RBP19.87■□□□□ 0.77
TOP3B-217ENST00000489581 TMCO2Q7Z6W1 182 aaPredicted RBP19.87■□□□□ 0.77
TOP3B-217ENST00000489581 CCDC155Q8N6L0 562 aa19.87■□□□□ 0.77
TOP3B-217ENST00000489581 CAGE1Q8TC20 777 aa19.87■□□□□ 0.77
TOP3B-217ENST00000489581 SYTL5Q8TDW5 730 aaPredicted RBP19.87■□□□□ 0.77
TOP3B-217ENST00000489581 ESR2Q92731 530 aa19.87■□□□□ 0.77
TOP3B-217ENST00000489581 KAT2BQ92831 832 aa19.87■□□□□ 0.77
TOP3B-217ENST00000489581 RILPL2Q969X0 211 aa19.87■□□□□ 0.77
TOP3B-217ENST00000489581 RNF41Q9H4P4 317 aaPredicted RBP19.87■□□□□ 0.77
TOP3B-217ENST00000489581 COL20A1Q9P218 1284 aa19.87■□□□□ 0.77
TOP3B-217ENST00000489581 RBAK-RBAKDNI3L0D1 243 aa19.86■□□□□ 0.77
TOP3B-217ENST00000489581 CASTP20810 708 aaKnown RBP19.86■□□□□ 0.77
TOP3B-217ENST00000489581 WDR5P61964 334 aaKnown RBP19.86■□□□□ 0.77
TOP3B-217ENST00000489581 ARHGAP1Q07960 439 aa19.86■□□□□ 0.77
TOP3B-217ENST00000489581 DGKHQ86XP1 1220 aa19.86■□□□□ 0.77
TOP3B-217ENST00000489581 NSUN6Q8TEA1 469 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms