RNA–Protein interactions for RNA: ENST00000489444.6

GBP3-207, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,455 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-207ENST00000489444 LZTS2Q9BRK4 669 aa5.6□□□□□ -1.51
GBP3-207ENST00000489444 UBA5Q9GZZ9 404 aa5.6□□□□□ -1.51
GBP3-207ENST00000489444 JMJD4Q9H9V9 463 aa5.6□□□□□ -1.51
GBP3-207ENST00000489444 VTA1Q9NP79 307 aa5.6□□□□□ -1.51
GBP3-207ENST00000489444 XPNPEP3Q9NQH7 507 aa5.6□□□□□ -1.51
GBP3-207ENST00000489444 ZHX1Q9UKY1 873 aaPredicted RBP5.6□□□□□ -1.51
GBP3-207ENST00000489444 MRPL11Q9Y3B7 192 aaKnown RBP5.6□□□□□ -1.51
GBP3-207ENST00000489444 TAF6LQ9Y6J9 622 aa5.6□□□□□ -1.51
GBP3-207ENST00000489444 DOCK3Q8IZD9 2030 aa5.6□□□□□ -1.51
GBP3-207ENST00000489444 PTPDC1A2A3K4 754 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 SOWAHBA6NEL2 793 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 ZBTB5O15062 677 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 DHX16O60231 1041 aaKnown RBP5.59□□□□□ -1.51
GBP3-207ENST00000489444 EVI5O60447 810 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 SMARCA1P28370 1054 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 DDIT3P35638 169 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 GNAQP50148 359 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 CLCN6P51797 869 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 CNTN2Q02246 1040 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 BAATQ14032 418 aaPredicted RBP5.59□□□□□ -1.51
GBP3-207ENST00000489444 QRICH1Q2TAL8 776 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 HS1BP3Q53T59 392 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 NFXL1Q6ZNB6 911 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 RNF207Q6ZRF8 634 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 RNF180Q86T96 592 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 CCDC144CPQ8IYA2 1237 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 DNERQ8NFT8 737 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 CTCFLQ8NI51 663 aaPredicted RBP5.59□□□□□ -1.51
GBP3-207ENST00000489444 OXER1Q8TDS5 423 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 KCNB2Q92953 911 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 TSEN34Q9BSV6 310 aaKnown RBP5.59□□□□□ -1.51
GBP3-207ENST00000489444 AMNQ9BXJ7 453 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 UPF2Q9HAU5 1272 aaKnown RBP5.59□□□□□ -1.51
GBP3-207ENST00000489444 MAP3K20Q9NYL2 800 aaKnown RBP5.59□□□□□ -1.51
GBP3-207ENST00000489444 TNRC18O15417 2968 aaPredicted RBP5.59□□□□□ -1.51
GBP3-207ENST00000489444 NFIBO00712 420 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 DUSP11O75319 330 aaKnown RBP5.59□□□□□ -1.51
GBP3-207ENST00000489444 TAL1P17542 331 aaPredicted RBP5.59□□□□□ -1.51
GBP3-207ENST00000489444 ALDH5A1P51649 535 aaPredicted RBP5.59□□□□□ -1.51
GBP3-207ENST00000489444 NKX3-2P78367 333 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 GHRHRQ02643 423 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 DMTNQ08495 405 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 TROAPQ12815 778 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 DSG2Q14126 1118 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 LRRC41Q15345 812 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 USH1GQ495M9 461 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 SLC30A10Q6XR72 485 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 CHST3Q7LGC8 479 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 ZNF654Q8IZM8 581 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 STAG2Q8N3U4 1231 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 NEK1Q96PY6 1258 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 SPZ1Q9BXG8 430 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 KATNBL1Q9H079 304 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 UPF3AQ9H1J1 476 aaKnown RBP5.59□□□□□ -1.51
GBP3-207ENST00000489444 RIOX1Q9H6W3 641 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 SPC25Q9HBM1 224 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 GPHNQ9NQX3 736 aaPredicted RBP5.59□□□□□ -1.51
GBP3-207ENST00000489444 PHF24Q9UPV7 400 aa5.59□□□□□ -1.51
GBP3-207ENST00000489444 ZNFX1Q9P2E3 1918 aaKnown RBP5.59□□□□□ -1.51
GBP3-207ENST00000489444 PNMA6FA0A0J9YX94 578 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 MOXD2PA6NHM9 499 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 DYNC1I1O14576 645 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 ZNF500O60304 480 aaPredicted RBP5.58□□□□□ -1.52
GBP3-207ENST00000489444 NCLP19338 710 aaKnown RBP5.58□□□□□ -1.52
GBP3-207ENST00000489444 PTMSP20962 102 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 CALML3P27482 149 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 CST5P28325 142 aaPredicted RBP5.58□□□□□ -1.52
GBP3-207ENST00000489444 HSPA4P34932 840 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 GJA9P57773 515 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 SKOR2Q2VWA4 1001 aaPredicted RBP5.58□□□□□ -1.52
GBP3-207ENST00000489444 GJC2Q5T442 439 aaPredicted RBP5.58□□□□□ -1.52
GBP3-207ENST00000489444 IQSEC1Q6DN90 963 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 SYNE3Q6ZMZ3 975 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 DHX32Q7L7V1 743 aaKnown RBP5.58□□□□□ -1.52
GBP3-207ENST00000489444 SGMS1Q86VZ5 419 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 CPVLQ9H3G5 476 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 RBM28Q9NW13 759 aaKnown RBP5.58□□□□□ -1.52
GBP3-207ENST00000489444 Q9Y3F1 56 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 SYNRGQ9UMZ2 1314 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 RBM47A0AV96 593 aaKnown RBP5.58□□□□□ -1.52
GBP3-207ENST00000489444 H0YGN5 161 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 ADAMTS4O75173 837 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 EDNRBP24530 442 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 RCAN1P53805 252 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 RPS6P62753 249 aaKnown RBP5.58□□□□□ -1.52
GBP3-207ENST00000489444 EXOSC10Q01780 885 aaKnown RBP5.58□□□□□ -1.52
GBP3-207ENST00000489444 TNFAIP2Q03169 654 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 CCDC144BQ3MJ40 725 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 C1orf53Q5VUE5 145 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 C7orf61Q8IZ16 206 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 PCSK9Q8NBP7 692 aaKnown RBP5.58□□□□□ -1.52
GBP3-207ENST00000489444 KLHDC9Q8NEP7 349 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 NUP133Q8WUM0 1156 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 RRP36Q96EU6 259 aaKnown RBP5.58□□□□□ -1.52
GBP3-207ENST00000489444 IWS1Q96ST2 819 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 SENP6Q9GZR1 1112 aaPredicted RBP5.58□□□□□ -1.52
GBP3-207ENST00000489444 SENP2Q9HC62 589 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 VAT1LQ9HCJ6 419 aa5.58□□□□□ -1.52
GBP3-207ENST00000489444 FARP1Q9Y4F1 1045 aaPredicted RBP5.58□□□□□ -1.52
GBP3-207ENST00000489444 SLC12A7Q9Y666 1083 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms