RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 GJA9P57773 515 aa15.45■□□□□ 0.06
CCL28-202ENST00000489442 APOBRQ0VD83 1088 aa15.45■□□□□ 0.06
CCL28-202ENST00000489442 STXBP2Q15833 593 aa15.45■□□□□ 0.06
CCL28-202ENST00000489442 KCNA10Q16322 511 aa15.45■□□□□ 0.06
CCL28-202ENST00000489442 SLC39A5Q6ZMH5 540 aa15.45■□□□□ 0.06
CCL28-202ENST00000489442 TLK2Q86UE8 772 aa15.45■□□□□ 0.06
CCL28-202ENST00000489442 FCHSD1Q86WN1 690 aa15.45■□□□□ 0.06
CCL28-202ENST00000489442 VTI1AQ96AJ9 217 aa15.45■□□□□ 0.06
CCL28-202ENST00000489442 COL20A1Q9P218 1284 aa15.45■□□□□ 0.06
CCL28-202ENST00000489442 PHF24Q9UPV7 400 aa15.45■□□□□ 0.06
CCL28-202ENST00000489442 ATP11BQ9Y2G3 1177 aa15.45■□□□□ 0.06
CCL28-202ENST00000489442 CYP46A1Q9Y6A2 500 aa15.45■□□□□ 0.06
CCL28-202ENST00000489442 KIAA1217Q5T5P2 1943 aa15.45■□□□□ 0.06
CCL28-202ENST00000489442 CCDC196A0A1B0GTZ2 297 aa15.44■□□□□ 0.06
CCL28-202ENST00000489442 hCG_1642624A0A1W2PR95 340 aa15.44■□□□□ 0.06
CCL28-202ENST00000489442 MOXD2PA6NHM9 499 aa15.44■□□□□ 0.06
CCL28-202ENST00000489442 OPLAHO14841 1288 aa15.44■□□□□ 0.06
CCL28-202ENST00000489442 EDNRBP24530 442 aa15.44■□□□□ 0.06
CCL28-202ENST00000489442 METAP2P50579 478 aaKnown RBP eCLIP15.44■□□□□ 0.06
CCL28-202ENST00000489442 ACLYP53396 1101 aa15.44■□□□□ 0.06
CCL28-202ENST00000489442 RUFY3Q7L099 469 aa15.44■□□□□ 0.06
CCL28-202ENST00000489442 KLHDC9Q8NEP7 349 aa15.44■□□□□ 0.06
CCL28-202ENST00000489442 SCFD2Q8WU76 684 aa15.44■□□□□ 0.06
CCL28-202ENST00000489442 CUL5Q93034 780 aa15.44■□□□□ 0.06
CCL28-202ENST00000489442 UPF3AQ9H1J1 476 aaKnown RBP15.44■□□□□ 0.06
CCL28-202ENST00000489442 PXMP2Q9NR77 195 aa15.44■□□□□ 0.06
CCL28-202ENST00000489442 A0A1W2PQ45 241 aaPredicted RBP15.43■□□□□ 0.06
CCL28-202ENST00000489442 A0A1W2PQY0 241 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 MYADML2A6NDP7 307 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 ZEB2O60315 1214 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 NR3C2P08235 984 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 MYCLP12524 364 aaPredicted RBP15.43■□□□□ 0.06
CCL28-202ENST00000489442 CST5P28325 142 aaPredicted RBP15.43■□□□□ 0.06
CCL28-202ENST00000489442 RCAN1P53805 252 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 BEX3Q00994 111 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 TTLL4Q14679 1199 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 PPP2R5BQ15173 497 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 DUSP28Q4G0W2 176 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 SEPT14Q6ZU15 432 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 SMARCC2Q8TAQ2 1214 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 GLT1D1Q96MS3 346 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 STARD7Q9NQZ5 370 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 PRKAG2Q9UGJ0 569 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 ZMYND8Q9ULU4 1186 aaPredicted RBP15.43■□□□□ 0.06
CCL28-202ENST00000489442 GNEQ9Y223 722 aaKnown RBP15.43■□□□□ 0.06
CCL28-202ENST00000489442 Q9Y3F1 56 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 TRIOBPQ9H2D6 2365 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 RBM47A0AV96 593 aaKnown RBP15.43■□□□□ 0.06
CCL28-202ENST00000489442 EIF3JO75822 258 aaKnown RBP15.43■□□□□ 0.06
CCL28-202ENST00000489442 ASGR1P07306 291 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 TXNP10599 105 aaKnown RBP15.43■□□□□ 0.06
CCL28-202ENST00000489442 SYN1P17600 705 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 RTP1P59025 263 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 IRX5P78411 483 aaPredicted RBP15.43■□□□□ 0.06
CCL28-202ENST00000489442 GHRHRQ02643 423 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 FSCN1Q16658 493 aaKnown RBP15.43■□□□□ 0.06
CCL28-202ENST00000489442 BRDTQ58F21 947 aaPredicted RBP15.43■□□□□ 0.06
CCL28-202ENST00000489442 HEATR3Q7Z4Q2 680 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 TM6SF1Q9BZW5 370 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 RNF39Q9H2S5 420 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 ZSWIM6Q9HCJ5 1215 aa15.43■□□□□ 0.06
CCL28-202ENST00000489442 V9GY48 417 aaPredicted RBP15.43■□□□□ 0.06
CCL28-202ENST00000489442 MYH7BA7E2Y1 1941 aa15.42■□□□□ 0.06
CCL28-202ENST00000489442 NKRFO15226 690 aaKnown RBP eCLIP15.42■□□□□ 0.06
CCL28-202ENST00000489442 TMEM63BQ5T3F8 832 aa15.42■□□□□ 0.06
CCL28-202ENST00000489442 FBXL16Q8N461 479 aa15.42■□□□□ 0.06
CCL28-202ENST00000489442 OR6J1Q8NGC5 347 aa15.42■□□□□ 0.06
CCL28-202ENST00000489442 UPF3BQ9BZI7 483 aaKnown RBP15.42■□□□□ 0.06
CCL28-202ENST00000489442 PSTPIP2Q9H939 334 aa15.42■□□□□ 0.06
CCL28-202ENST00000489442 CNTNAP5Q8WYK1 1306 aa15.41■□□□□ 0.06
CCL28-202ENST00000489442 PTGS1P23219 599 aa15.41■□□□□ 0.06
CCL28-202ENST00000489442 CDC27P30260 824 aa15.41■□□□□ 0.06
CCL28-202ENST00000489442 CCND2P30279 289 aa15.41■□□□□ 0.06
CCL28-202ENST00000489442 ADD1P35611 737 aaKnown RBP15.41■□□□□ 0.06
CCL28-202ENST00000489442 CPT1AP50416 773 aa15.41■□□□□ 0.06
CCL28-202ENST00000489442 PGM5Q15124 567 aa15.41■□□□□ 0.06
CCL28-202ENST00000489442 TRIM60Q495X7 471 aa15.41■□□□□ 0.06
CCL28-202ENST00000489442 CCSAPQ6IQ19 270 aaPredicted RBP15.41■□□□□ 0.06
CCL28-202ENST00000489442 USP17L6PQ6QN14 398 aa15.41■□□□□ 0.06
CCL28-202ENST00000489442 CHRDL2Q6WN34 429 aa15.41■□□□□ 0.06
CCL28-202ENST00000489442 GPKOWQ92917 476 aaPredicted RBP eCLIP15.41■□□□□ 0.06
CCL28-202ENST00000489442 PDCD2LQ9BRP1 358 aa15.41■□□□□ 0.06
CCL28-202ENST00000489442 PDRG1Q9NUG6 133 aa15.41■□□□□ 0.06
CCL28-202ENST00000489442 ELP1O95163 1332 aa15.4■□□□□ 0.06
CCL28-202ENST00000489442 PQBP1O60828 265 aaKnown RBP15.4■□□□□ 0.06
CCL28-202ENST00000489442 CABYRO75952 493 aa15.4■□□□□ 0.06
CCL28-202ENST00000489442 NAPAP54920 295 aa15.4■□□□□ 0.06
CCL28-202ENST00000489442 NKX3-2P78367 333 aa15.4■□□□□ 0.06
CCL28-202ENST00000489442 AKAP17AQ02040 695 aaKnown RBP15.4■□□□□ 0.06
CCL28-202ENST00000489442 C1orf53Q5VUE5 145 aa15.4■□□□□ 0.06
CCL28-202ENST00000489442 CXCL17Q6UXB2 119 aa15.4■□□□□ 0.06
CCL28-202ENST00000489442 VSIG10LQ86VR7 867 aa15.4■□□□□ 0.06
CCL28-202ENST00000489442 AGXT2Q9BYV1 514 aa15.4■□□□□ 0.06
CCL28-202ENST00000489442 PRDM5Q9NQX1 630 aaPredicted RBP15.4■□□□□ 0.06
CCL28-202ENST00000489442 FAM217BQ9NTX9 383 aaPredicted RBP15.4■□□□□ 0.06
CCL28-202ENST00000489442 COLQQ9Y215 455 aaPredicted RBP15.4■□□□□ 0.06
CCL28-202ENST00000489442 MRVI1Q9Y6F6 885 aa15.4■□□□□ 0.06
CCL28-202ENST00000489442 A0A0U1RQG5 324 aaPredicted RBP15.39■□□□□ 0.05
CCL28-202ENST00000489442 DCDC2CA8MYV0 355 aa15.39■□□□□ 0.05
CCL28-202ENST00000489442 PIK3CDO00329 1044 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms