RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 ZMYND12Q9H0C1 365 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 DEFB129Q9H1M3 183 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 CUEDC2Q9H467 287 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 MAGEF1Q9HAY2 307 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 BARHL2Q9NY43 387 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 MAD2L2Q9UI95 211 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 PCDHA5Q9Y5H7 936 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 PAPPA2Q9BXP8 1791 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 COL2A1P02458 1487 aaPredicted RBP9.59□□□□□ -0.87
VTI1A-207ENST00000489357 CLRN2A0PK11 232 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 UBE2Q2LH0YL09 131 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 M0R2N6 131 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 DYNC1I1O14576 645 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 POLR2DO15514 142 aaKnown RBP9.58□□□□□ -0.88
VTI1A-207ENST00000489357 CCP110O43303 1012 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 NMT2O60551 498 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 PARP1P09874 1014 aaKnown RBP9.58□□□□□ -0.88
VTI1A-207ENST00000489357 FDX1P10109 184 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 PTGS1P23219 599 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 CLK2P49760 499 aaKnown RBP9.58□□□□□ -0.88
VTI1A-207ENST00000489357 RBM5P52756 815 aaKnown RBP eCLIP9.58□□□□□ -0.88
VTI1A-207ENST00000489357 COPS2P61201 443 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 GABPAQ06546 454 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 MORC3Q14149 939 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 RASA3Q14644 834 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 PPP1R18Q6NYC8 613 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 KRT25Q7Z3Z0 450 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 SH3RF1Q7Z6J0 888 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 MTERF4Q7Z6M4 381 aaKnown RBP9.58□□□□□ -0.88
VTI1A-207ENST00000489357 SAPCD2Q86UD0 394 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 CMTR1Q8N1G2 835 aaKnown RBP9.58□□□□□ -0.88
VTI1A-207ENST00000489357 SPC24Q8NBT2 197 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 CCDC112Q8NEF3 446 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 RRP36Q96EU6 259 aaKnown RBP9.58□□□□□ -0.88
VTI1A-207ENST00000489357 CSRNP2Q9H175 543 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 DHX36Q9H2U1 1008 aaKnown RBP9.58□□□□□ -0.88
VTI1A-207ENST00000489357 KCNF1Q9H3M0 494 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 RMND1Q9NWS8 449 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 SYNPO2Q9UMS6 1093 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 SCAF8Q9UPN6 1271 aaKnown RBP9.58□□□□□ -0.88
VTI1A-207ENST00000489357 TLL2Q9Y6L7 1015 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 GREB1LQ9C091 1923 aaPredicted RBP9.58□□□□□ -0.88
VTI1A-207ENST00000489357 SSC5DA1L4H1 1573 aa9.58□□□□□ -0.88
VTI1A-207ENST00000489357 MYH8P13535 1937 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 CCDC194A0A1B0GVG4 234 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 UNCXA6NJT0 531 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 RASSF10A6NK89 507 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 KLRF2D3W0D1 207 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 SMIM22K7EJ46 135 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 ENTPD3O75355 529 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 CELF2O95319 508 aaKnown RBP9.57□□□□□ -0.88
VTI1A-207ENST00000489357 HLA-DOAP06340 250 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 GTF2F1P35269 517 aaKnown RBP eCLIP9.57□□□□□ -0.88
VTI1A-207ENST00000489357 PPP1R2P41236 205 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 PLCD1P51178 756 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 FKBP1BP68106 108 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 GUCA2AQ02747 115 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 NFIAQ12857 509 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 PNOCQ13519 176 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 TNFAIP1Q13829 316 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 GPATCH4Q5T3I0 446 aaKnown RBP9.57□□□□□ -0.88
VTI1A-207ENST00000489357 LDLRAD1Q5T700 205 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 MCTP2Q6DN12 878 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 MAPKAPK5Q8IW41 473 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 FAM151AQ8WW52 585 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 SHISA4Q96DD7 197 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 PCMTD1Q96MG8 357 aaPredicted RBP9.57□□□□□ -0.88
VTI1A-207ENST00000489357 MTRQ99707 1265 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 GLT8D2Q9H1C3 349 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 ZNF408Q9H9D4 720 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 C6orf50Q9HD87 102 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 USP40Q9NVE5 1235 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 SEC63Q9UGP8 760 aaKnown RBP9.57□□□□□ -0.88
VTI1A-207ENST00000489357 ABT1Q9ULW3 272 aaKnown RBP9.57□□□□□ -0.88
VTI1A-207ENST00000489357 STX8Q9UNK0 236 aa9.57□□□□□ -0.88
VTI1A-207ENST00000489357 SIPA1L1O43166 1804 aa9.56□□□□□ -0.88
VTI1A-207ENST00000489357 ATRNL1Q5VV63 1379 aa9.56□□□□□ -0.88
VTI1A-207ENST00000489357 IGKV6D-41A0A0C4DH26 115 aa9.56□□□□□ -0.88
VTI1A-207ENST00000489357 STXBP3O00186 592 aa9.56□□□□□ -0.88
VTI1A-207ENST00000489357 SNHG28P0DPA3 235 aa9.56□□□□□ -0.88
VTI1A-207ENST00000489357 VEGFBP49765 207 aa9.56□□□□□ -0.88
VTI1A-207ENST00000489357 DEFB115Q30KQ5 88 aa9.56□□□□□ -0.88
VTI1A-207ENST00000489357 DNTTIP2Q5QJE6 756 aaKnown RBP9.56□□□□□ -0.88
VTI1A-207ENST00000489357 NBPF12Q5TAG4 269 aaPredicted RBP9.56□□□□□ -0.88
VTI1A-207ENST00000489357 PRAMEF18Q5VWM3 479 aa9.56□□□□□ -0.88
VTI1A-207ENST00000489357 SH3BP5LQ7L8J4 393 aa9.56□□□□□ -0.88
VTI1A-207ENST00000489357 FCHSD1Q86WN1 690 aa9.56□□□□□ -0.88
VTI1A-207ENST00000489357 ZFPM1Q8IX07 1006 aa9.56□□□□□ -0.88
VTI1A-207ENST00000489357 SCUBE3Q8IX30 993 aa9.56□□□□□ -0.88
VTI1A-207ENST00000489357 DYNLL2Q96FJ2 89 aa9.56□□□□□ -0.88
VTI1A-207ENST00000489357 CTAGE1Q96RT6 745 aa9.56□□□□□ -0.88
VTI1A-207ENST00000489357 NAP1L4Q99733 375 aaKnown RBP9.56□□□□□ -0.88
VTI1A-207ENST00000489357 CCSER1Q9C0I3 900 aa9.56□□□□□ -0.88
VTI1A-207ENST00000489357 RIOX1Q9H6W3 641 aa9.56□□□□□ -0.88
VTI1A-207ENST00000489357 GBA2Q9HCG7 927 aaPredicted RBP9.56□□□□□ -0.88
VTI1A-207ENST00000489357 DDX4Q9NQI0 724 aaKnown RBP9.56□□□□□ -0.88
VTI1A-207ENST00000489357 MTMR4Q9NYA4 1195 aa9.56□□□□□ -0.88
VTI1A-207ENST00000489357 LIMD1Q9UGP4 676 aa9.56□□□□□ -0.88
VTI1A-207ENST00000489357 SERTAD1Q9UHV2 236 aa9.56□□□□□ -0.88
VTI1A-207ENST00000489357 SERPINB13Q9UIV8 391 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms