RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 EIF2AK2P19525 551 aaKnown RBP18.46■□□□□ 0.55
ERGIC3-216ENST00000488384 LRRC41Q15345 812 aa18.46■□□□□ 0.55
ERGIC3-216ENST00000488384 NTRK3Q16288 839 aa18.46■□□□□ 0.55
ERGIC3-216ENST00000488384 GJC2Q5T442 439 aaPredicted RBP18.46■□□□□ 0.55
ERGIC3-216ENST00000488384 TYW1BQ6NUM6 668 aa18.46■□□□□ 0.55
ERGIC3-216ENST00000488384 ALDH8A1Q9H2A2 487 aaPredicted RBP18.46■□□□□ 0.55
ERGIC3-216ENST00000488384 C11orf49Q9H6J7 331 aa18.46■□□□□ 0.55
ERGIC3-216ENST00000488384 V9GY48 417 aaPredicted RBP18.46■□□□□ 0.55
ERGIC3-216ENST00000488384 AK2P54819 239 aa18.45■□□□□ 0.54
ERGIC3-216ENST00000488384 CCT2P78371 535 aaKnown RBP18.45■□□□□ 0.54
ERGIC3-216ENST00000488384 ARRDC4Q8NCT1 418 aa18.45■□□□□ 0.54
ERGIC3-216ENST00000488384 ZNF274Q96GC6 653 aaPredicted RBP18.45■□□□□ 0.54
ERGIC3-216ENST00000488384 IWS1Q96ST2 819 aa18.45■□□□□ 0.54
ERGIC3-216ENST00000488384 FRMPD4Q14CM0 1322 aa18.45■□□□□ 0.54
ERGIC3-216ENST00000488384 RBM47A0AV96 593 aaKnown RBP18.44■□□□□ 0.54
ERGIC3-216ENST00000488384 B4DLN1 442 aa18.44■□□□□ 0.54
ERGIC3-216ENST00000488384 STXBP3O00186 592 aa18.44■□□□□ 0.54
ERGIC3-216ENST00000488384 PIK3CDO00329 1044 aa18.44■□□□□ 0.54
ERGIC3-216ENST00000488384 MEIS2O14770 477 aa18.44■□□□□ 0.54
ERGIC3-216ENST00000488384 SMPD1P17405 629 aa18.44■□□□□ 0.54
ERGIC3-216ENST00000488384 PTGS1P23219 599 aa18.44■□□□□ 0.54
ERGIC3-216ENST00000488384 MRPL12P52815 198 aaKnown RBP18.44■□□□□ 0.54
ERGIC3-216ENST00000488384 TNFAIP2Q03169 654 aa18.44■□□□□ 0.54
ERGIC3-216ENST00000488384 TMEM63BQ5T3F8 832 aa18.44■□□□□ 0.54
ERGIC3-216ENST00000488384 ARHGEF16Q5VV41 709 aa18.44■□□□□ 0.54
ERGIC3-216ENST00000488384 PPP1R18Q6NYC8 613 aa18.44■□□□□ 0.54
ERGIC3-216ENST00000488384 USP17L6PQ6QN14 398 aa18.44■□□□□ 0.54
ERGIC3-216ENST00000488384 FCHSD1Q86WN1 690 aa18.44■□□□□ 0.54
ERGIC3-216ENST00000488384 IL31RAQ8NI17 732 aa18.44■□□□□ 0.54
ERGIC3-216ENST00000488384 PHKBQ93100 1093 aa18.44■□□□□ 0.54
ERGIC3-216ENST00000488384 PDCD2LQ9BRP1 358 aa18.44■□□□□ 0.54
ERGIC3-216ENST00000488384 UPF3AQ9H1J1 476 aaKnown RBP18.44■□□□□ 0.54
ERGIC3-216ENST00000488384 TPCN1Q9ULQ1 816 aa18.44■□□□□ 0.54
ERGIC3-216ENST00000488384 GNEQ9Y223 722 aaKnown RBP18.44■□□□□ 0.54
ERGIC3-216ENST00000488384 TRIOBPQ9H2D6 2365 aa18.44■□□□□ 0.54
ERGIC3-216ENST00000488384 MYADML2A6NDP7 307 aa18.43■□□□□ 0.54
ERGIC3-216ENST00000488384 KBTBD13C9JR72 458 aa18.43■□□□□ 0.54
ERGIC3-216ENST00000488384 hCG_1984214I3L0E3 225 aa18.43■□□□□ 0.54
ERGIC3-216ENST00000488384 MYCNP04198 464 aaPredicted RBP18.43■□□□□ 0.54
ERGIC3-216ENST00000488384 NR3C2P08235 984 aa18.43■□□□□ 0.54
ERGIC3-216ENST00000488384 IFNAR1P17181 557 aa18.43■□□□□ 0.54
ERGIC3-216ENST00000488384 IRX5P78411 483 aaPredicted RBP18.43■□□□□ 0.54
ERGIC3-216ENST00000488384 STK3Q13188 491 aa18.43■□□□□ 0.54
ERGIC3-216ENST00000488384 PFKFB3Q16875 520 aaPredicted RBP18.43■□□□□ 0.54
ERGIC3-216ENST00000488384 ZNF713Q8N859 430 aaPredicted RBP18.43■□□□□ 0.54
ERGIC3-216ENST00000488384 KIF2CQ99661 725 aa18.43■□□□□ 0.54
ERGIC3-216ENST00000488384 BARHL2Q9NY43 387 aa18.43■□□□□ 0.54
ERGIC3-216ENST00000488384 COLQQ9Y215 455 aaPredicted RBP18.43■□□□□ 0.54
ERGIC3-216ENST00000488384 KIAA1217Q5T5P2 1943 aa18.43■□□□□ 0.54
ERGIC3-216ENST00000488384 CTAGE5O15320 804 aa18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 PRPF3O43395 683 aaKnown RBP18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 PPFIA3O75145 1194 aa18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 SCG2P13521 617 aa18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 CST5P28325 142 aaPredicted RBP18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 NAPAP54920 295 aa18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 GJA9P57773 515 aa18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 NKX3-2P78367 333 aa18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 PGM5Q15124 567 aa18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 STXBP2Q15833 593 aa18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 PKN1Q16512 942 aa18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 UBE2SQ16763 222 aa18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 IQSEC1Q6DN90 963 aa18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 RNF180Q86T96 592 aa18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 TLK2Q86UE8 772 aa18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 KLHDC9Q8NEP7 349 aa18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 SMARCC2Q8TAQ2 1214 aa18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 CUL5Q93034 780 aa18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 HTATIP2Q9BUP3 242 aa18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 RNF26Q9BY78 433 aaPredicted RBP18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 C22orf23Q9BZE7 217 aa18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 PRO3102Q9H379 93 aa18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 PSTPIP2Q9H939 334 aa18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 RBM27Q9P2N5 1060 aaKnown RBP18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 RANBP2P49792 3224 aaKnown RBP18.42■□□□□ 0.54
ERGIC3-216ENST00000488384 C6orf222P0C671 652 aaPredicted RBP18.41■□□□□ 0.54
ERGIC3-216ENST00000488384 RBM25P49756 843 aaKnown RBP18.41■□□□□ 0.54
ERGIC3-216ENST00000488384 NEK4P51957 841 aa18.41■□□□□ 0.54
ERGIC3-216ENST00000488384 ANKRD1Q15327 319 aa18.41■□□□□ 0.54
ERGIC3-216ENST00000488384 DUSP28Q4G0W2 176 aa18.41■□□□□ 0.54
ERGIC3-216ENST00000488384 CCSAPQ6IQ19 270 aaPredicted RBP18.41■□□□□ 0.54
ERGIC3-216ENST00000488384 NOL8Q76FK4 1167 aaKnown RBP18.41■□□□□ 0.54
ERGIC3-216ENST00000488384 SCFD2Q8WU76 684 aa18.41■□□□□ 0.54
ERGIC3-216ENST00000488384 SLC26A6Q9BXS9 759 aa18.41■□□□□ 0.54
ERGIC3-216ENST00000488384 WDR11Q9BZH6 1224 aa18.41■□□□□ 0.54
ERGIC3-216ENST00000488384 PHF24Q9UPV7 400 aa18.41■□□□□ 0.54
ERGIC3-216ENST00000488384 PFKFB2O60825 505 aa18.4■□□□□ 0.54
ERGIC3-216ENST00000488384 ARIH2O95376 493 aa18.4■□□□□ 0.54
ERGIC3-216ENST00000488384 MYCLP12524 364 aaPredicted RBP18.4■□□□□ 0.54
ERGIC3-216ENST00000488384 FXR1P51114 621 aaKnown RBP eCLIP18.4■□□□□ 0.54
ERGIC3-216ENST00000488384 SCRN1Q12765 414 aa18.4■□□□□ 0.54
ERGIC3-216ENST00000488384 SENP6Q9GZR1 1112 aaPredicted RBP18.4■□□□□ 0.54
ERGIC3-216ENST00000488384 RIC8AQ9NPQ8 531 aa18.4■□□□□ 0.54
ERGIC3-216ENST00000488384 CPLX1O14810 134 aa18.39■□□□□ 0.53
ERGIC3-216ENST00000488384 EIF3JO75822 258 aaKnown RBP18.39■□□□□ 0.53
ERGIC3-216ENST00000488384 RGS20O76081 388 aa18.39■□□□□ 0.53
ERGIC3-216ENST00000488384 LARGE1O95461 756 aa18.39■□□□□ 0.53
ERGIC3-216ENST00000488384 CCND2P30279 289 aa18.39■□□□□ 0.53
ERGIC3-216ENST00000488384 ADCY7P51828 1080 aa18.39■□□□□ 0.53
ERGIC3-216ENST00000488384 LRRC26Q2I0M4 334 aa18.39■□□□□ 0.53
ERGIC3-216ENST00000488384 CCDC62Q6P9F0 684 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms