RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 PITPNM1O00562 1244 aa15.23■□□□□ 0.03
UBR4-213ENST00000483922 RANBP6O60518 1105 aaKnown RBP15.23■□□□□ 0.03
UBR4-213ENST00000483922 SLC3A2P08195 630 aaKnown RBP15.23■□□□□ 0.03
UBR4-213ENST00000483922 DEFB103AP81534 67 aa15.23■□□□□ 0.03
UBR4-213ENST00000483922 GDF6Q6KF10 455 aaPredicted RBP15.23■□□□□ 0.03
UBR4-213ENST00000483922 CCDC62Q6P9F0 684 aa15.23■□□□□ 0.03
UBR4-213ENST00000483922 KAT2BQ92831 832 aa15.23■□□□□ 0.03
UBR4-213ENST00000483922 HLA-CQ95604 372 aa15.23■□□□□ 0.03
UBR4-213ENST00000483922 FTOQ9C0B1 505 aaKnown RBP eCLIP15.23■□□□□ 0.03
UBR4-213ENST00000483922 CHMP4BQ9H444 224 aaKnown RBP15.23■□□□□ 0.03
UBR4-213ENST00000483922 RCAN3Q9UKA8 241 aa15.23■□□□□ 0.03
UBR4-213ENST00000483922 TTC41PQ6P2S7 1318 aa15.22■□□□□ 0.03
UBR4-213ENST00000483922 SALL3Q9BXA9 1300 aa15.22■□□□□ 0.03
UBR4-213ENST00000483922 LOC102724159A0A0B4J2E5 919 aa15.22■□□□□ 0.03
UBR4-213ENST00000483922 GTPBP6O43824 516 aaPredicted RBP15.22■□□□□ 0.03
UBR4-213ENST00000483922 ORC4O43929 436 aa15.22■□□□□ 0.03
UBR4-213ENST00000483922 PWP2Q15269 919 aaKnown RBP15.22■□□□□ 0.03
UBR4-213ENST00000483922 CCDC96Q2M329 555 aa15.22■□□□□ 0.03
UBR4-213ENST00000483922 RNF207Q6ZRF8 634 aa15.22■□□□□ 0.03
UBR4-213ENST00000483922 FSD1Q9BTV5 496 aa15.22■□□□□ 0.03
UBR4-213ENST00000483922 PCDHB15Q9Y5E8 787 aa15.22■□□□□ 0.03
UBR4-213ENST00000483922 NBNO60934 754 aa15.21■□□□□ 0.03
UBR4-213ENST00000483922 TXNP10599 105 aaKnown RBP15.21■□□□□ 0.03
UBR4-213ENST00000483922 PDHBP11177 359 aa15.21■□□□□ 0.03
UBR4-213ENST00000483922 ACTN1P12814 892 aa15.21■□□□□ 0.03
UBR4-213ENST00000483922 WDR5P61964 334 aaKnown RBP15.21■□□□□ 0.03
UBR4-213ENST00000483922 PTPN11Q06124 597 aaPredicted RBP15.21■□□□□ 0.03
UBR4-213ENST00000483922 RETREG2Q8NC44 543 aa15.21■□□□□ 0.03
UBR4-213ENST00000483922 GPATCH3Q96I76 525 aa15.21■□□□□ 0.03
UBR4-213ENST00000483922 CPVLQ9H3G5 476 aa15.21■□□□□ 0.03
UBR4-213ENST00000483922 GPHNQ9NQX3 736 aaPredicted RBP15.21■□□□□ 0.03
UBR4-213ENST00000483922 TCP11L1Q9NUJ3 509 aa15.21■□□□□ 0.03
UBR4-213ENST00000483922 TANC1Q9C0D5 1861 aa15.2■□□□□ 0.02
UBR4-213ENST00000483922 COL4A4P53420 1690 aaPredicted RBP15.2■□□□□ 0.02
UBR4-213ENST00000483922 FAM86C2PA6NEL3 165 aa15.2■□□□□ 0.02
UBR4-213ENST00000483922 NKRFO15226 690 aaKnown RBP eCLIP15.2■□□□□ 0.02
UBR4-213ENST00000483922 GPR37L1O60883 481 aa15.2■□□□□ 0.02
UBR4-213ENST00000483922 FGAP02671 866 aa15.2■□□□□ 0.02
UBR4-213ENST00000483922 SNHG28P0DPA3 235 aa15.2■□□□□ 0.02
UBR4-213ENST00000483922 TOP1P11387 765 aaKnown RBP15.2■□□□□ 0.02
UBR4-213ENST00000483922 ARHGAP1Q07960 439 aa15.2■□□□□ 0.02
UBR4-213ENST00000483922 PDE4DQ08499 809 aa15.2■□□□□ 0.02
UBR4-213ENST00000483922 PPP2R5BQ15173 497 aa15.2■□□□□ 0.02
UBR4-213ENST00000483922 ALX1Q15699 326 aa15.2■□□□□ 0.02
UBR4-213ENST00000483922 PTGISQ16647 500 aa15.2■□□□□ 0.02
UBR4-213ENST00000483922 LY6KQ17RY6 165 aa15.2■□□□□ 0.02
UBR4-213ENST00000483922 TRAF7Q6Q0C0 670 aa15.2■□□□□ 0.02
UBR4-213ENST00000483922 GDPD5Q8WTR4 605 aa15.2■□□□□ 0.02
UBR4-213ENST00000483922 SCFD2Q8WU76 684 aa15.2■□□□□ 0.02
UBR4-213ENST00000483922 AFG1LQ8WV93 481 aa15.2■□□□□ 0.02
UBR4-213ENST00000483922 WNT8BQ93098 351 aa15.2■□□□□ 0.02
UBR4-213ENST00000483922 SUGCTQ9HAC7 445 aa15.2■□□□□ 0.02
UBR4-213ENST00000483922 COL20A1Q9P218 1284 aa15.2■□□□□ 0.02
UBR4-213ENST00000483922 ARIH1Q9Y4X5 557 aaPredicted RBP15.2■□□□□ 0.02
UBR4-213ENST00000483922 TRIP12Q14669 1992 aaPredicted RBP15.2■□□□□ 0.02
UBR4-213ENST00000483922 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.19■□□□□ 0.02
UBR4-213ENST00000483922 KPNA6O60684 536 aa15.19■□□□□ 0.02
UBR4-213ENST00000483922 BAIAP3O94812 1187 aa15.19■□□□□ 0.02
UBR4-213ENST00000483922 CXCL10P02778 98 aa15.19■□□□□ 0.02
UBR4-213ENST00000483922 CHMP4BP1P59074 171 aa15.19■□□□□ 0.02
UBR4-213ENST00000483922 ZNF543Q08ER8 600 aa15.19■□□□□ 0.02
UBR4-213ENST00000483922 BFSP2Q13515 415 aa15.19■□□□□ 0.02
UBR4-213ENST00000483922 HIC1Q14526 733 aa15.19■□□□□ 0.02
UBR4-213ENST00000483922 MBTPS1Q14703 1052 aa15.19■□□□□ 0.02
UBR4-213ENST00000483922 TMEM31Q5JXX7 168 aa15.19■□□□□ 0.02
UBR4-213ENST00000483922 PPP4R3BQ5MIZ7 849 aa15.19■□□□□ 0.02
UBR4-213ENST00000483922 DNERQ8NFT8 737 aa15.19■□□□□ 0.02
UBR4-213ENST00000483922 TAAR1Q96RJ0 339 aa15.19■□□□□ 0.02
UBR4-213ENST00000483922 KIF28PB7ZC32 967 aa15.18■□□□□ 0.02
UBR4-213ENST00000483922 PI4K2BG5E9Z4 385 aa15.18■□□□□ 0.02
UBR4-213ENST00000483922 MMP3P08254 477 aa15.18■□□□□ 0.02
UBR4-213ENST00000483922 GOLGA8HP0CJ92 632 aa15.18■□□□□ 0.02
UBR4-213ENST00000483922 TRIM71Q2Q1W2 868 aaKnown RBP15.18■□□□□ 0.02
UBR4-213ENST00000483922 LRRFIP1Q32MZ4 808 aaKnown RBP15.18■□□□□ 0.02
UBR4-213ENST00000483922 SESTD1Q86VW0 696 aa15.18■□□□□ 0.02
UBR4-213ENST00000483922 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.18■□□□□ 0.02
UBR4-213ENST00000483922 FAM227BQ96M60 508 aa15.18■□□□□ 0.02
UBR4-213ENST00000483922 MTUS1Q9ULD2 1270 aa15.18■□□□□ 0.02
UBR4-213ENST00000483922 WDFY4Q6ZS81 3184 aa15.18■□□□□ 0.02
UBR4-213ENST00000483922 BRWD1Q9NSI6 2320 aa15.17■□□□□ 0.02
UBR4-213ENST00000483922 CKBP12277 381 aa15.17■□□□□ 0.02
UBR4-213ENST00000483922 ERVK-21P61565 698 aa15.17■□□□□ 0.02
UBR4-213ENST00000483922 ZNF200P98182 395 aaPredicted RBP15.17■□□□□ 0.02
UBR4-213ENST00000483922 RBL2Q08999 1139 aa15.17■□□□□ 0.02
UBR4-213ENST00000483922 MKRN4PQ13434 485 aaPredicted RBP15.17■□□□□ 0.02
UBR4-213ENST00000483922 RRP12Q5JTH9 1297 aaKnown RBP15.17■□□□□ 0.02
UBR4-213ENST00000483922 LRRC8DQ7L1W4 858 aa15.17■□□□□ 0.02
UBR4-213ENST00000483922 RGS22Q8NE09 1264 aa15.17■□□□□ 0.02
UBR4-213ENST00000483922 AFAP1L1Q8TED9 768 aa15.17■□□□□ 0.02
UBR4-213ENST00000483922 OSBPL7Q9BZF2 842 aa15.17■□□□□ 0.02
UBR4-213ENST00000483922 UBA5Q9GZZ9 404 aa15.17■□□□□ 0.02
UBR4-213ENST00000483922 LMCD1Q9NZU5 365 aa15.17■□□□□ 0.02
UBR4-213ENST00000483922 HDAC6Q9UBN7 1215 aa15.17■□□□□ 0.02
UBR4-213ENST00000483922 WDR19Q8NEZ3 1342 aa15.17■□□□□ 0.02
UBR4-213ENST00000483922 LINC01553A4QN01 128 aa15.16■□□□□ 0.02
UBR4-213ENST00000483922 GJB5O95377 273 aa15.16■□□□□ 0.02
UBR4-213ENST00000483922 SELPP16109 830 aa15.16■□□□□ 0.02
UBR4-213ENST00000483922 USH1GQ495M9 461 aa15.16■□□□□ 0.02
UBR4-213ENST00000483922 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.16■□□□□ 0.02
UBR4-213ENST00000483922 SEPT14Q6ZU15 432 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 185.9 ms