RNA–Protein interactions for RNA: ENST00000480698.1

TMEM40-207, Transcript of transmembrane protein 40, humanhuman

TSL 2

Gene TMEM40, Length 507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-207ENST00000480698 STXBP3O00186 592 aa11.32□□□□□ -0.6
TMEM40-207ENST00000480698 GALR2O43603 387 aaPredicted RBP11.32□□□□□ -0.6
TMEM40-207ENST00000480698 GNAI3P08754 354 aa11.32□□□□□ -0.6
TMEM40-207ENST00000480698 SELPP16109 830 aa11.32□□□□□ -0.6
TMEM40-207ENST00000480698 KLRC3Q07444 240 aa11.32□□□□□ -0.6
TMEM40-207ENST00000480698 G3BP1Q13283 466 aaKnown RBP eCLIP11.32□□□□□ -0.6
TMEM40-207ENST00000480698 POLA2Q14181 598 aa11.32□□□□□ -0.6
TMEM40-207ENST00000480698 MBTPS1Q14703 1052 aa11.32□□□□□ -0.6
TMEM40-207ENST00000480698 LRRC8DQ7L1W4 858 aa11.32□□□□□ -0.6
TMEM40-207ENST00000480698 LCORLQ8N3X6 602 aa11.32□□□□□ -0.6
TMEM40-207ENST00000480698 CHD8Q9HCK8 2581 aa11.31□□□□□ -0.6
TMEM40-207ENST00000480698 ZBED4O75132 1171 aa11.31□□□□□ -0.6
TMEM40-207ENST00000480698 GPM6BQ13491 265 aa11.31□□□□□ -0.6
TMEM40-207ENST00000480698 TRIM71Q2Q1W2 868 aaKnown RBP11.31□□□□□ -0.6
TMEM40-207ENST00000480698 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.31□□□□□ -0.6
TMEM40-207ENST00000480698 FBXO11Q86XK2 927 aa11.31□□□□□ -0.6
TMEM40-207ENST00000480698 NYAP2Q9P242 653 aa11.31□□□□□ -0.6
TMEM40-207ENST00000480698 SUPT16HQ9Y5B9 1047 aaKnown RBP11.31□□□□□ -0.6
TMEM40-207ENST00000480698 CEP250Q9BV73 2442 aa11.31□□□□□ -0.6
TMEM40-207ENST00000480698 EP300Q09472 2414 aaPredicted RBP11.3□□□□□ -0.6
TMEM40-207ENST00000480698 LOC102724159A0A0B4J2E5 919 aa11.3□□□□□ -0.6
TMEM40-207ENST00000480698 IGKV6D-41A0A0C4DH26 115 aa11.3□□□□□ -0.6
TMEM40-207ENST00000480698 RBAK-RBAKDNI3L0D1 243 aa11.3□□□□□ -0.6
TMEM40-207ENST00000480698 FDX1P10109 184 aa11.3□□□□□ -0.6
TMEM40-207ENST00000480698 PDE6AP16499 860 aa11.3□□□□□ -0.6
TMEM40-207ENST00000480698 PWP2Q15269 919 aaKnown RBP11.3□□□□□ -0.6
TMEM40-207ENST00000480698 KIAA1211Q6ZU35 1233 aa11.3□□□□□ -0.6
TMEM40-207ENST00000480698 EEPD1Q7L9B9 569 aa11.3□□□□□ -0.6
TMEM40-207ENST00000480698 CCDC155Q8N6L0 562 aa11.3□□□□□ -0.6
TMEM40-207ENST00000480698 SMRP1Q8NCR6 262 aa11.3□□□□□ -0.6
TMEM40-207ENST00000480698 PPP1R13LQ8WUF5 828 aa11.3□□□□□ -0.6
TMEM40-207ENST00000480698 EAF2Q96CJ1 260 aaPredicted RBP11.3□□□□□ -0.6
TMEM40-207ENST00000480698 API5Q9BZZ5 524 aaKnown RBP11.3□□□□□ -0.6
TMEM40-207ENST00000480698 SMC4Q9NTJ3 1288 aa11.3□□□□□ -0.6
TMEM40-207ENST00000480698 CYP39A1Q9NYL5 469 aa11.3□□□□□ -0.6
TMEM40-207ENST00000480698 SYNPO2Q9UMS6 1093 aa11.3□□□□□ -0.6
TMEM40-207ENST00000480698 USP24Q9UPU5 2620 aa11.29□□□□□ -0.6
TMEM40-207ENST00000480698 MYH4Q9Y623 1939 aa11.29□□□□□ -0.6
TMEM40-207ENST00000480698 CYP2D7A0A087X1C5 515 aa11.29□□□□□ -0.6
TMEM40-207ENST00000480698 KPNA6O60684 536 aa11.29□□□□□ -0.6
TMEM40-207ENST00000480698 LGR5O75473 907 aa11.29□□□□□ -0.6
TMEM40-207ENST00000480698 MYL3P08590 195 aa11.29□□□□□ -0.6
TMEM40-207ENST00000480698 CKBP12277 381 aa11.29□□□□□ -0.6
TMEM40-207ENST00000480698 ICAM3P32942 547 aa11.29□□□□□ -0.6
TMEM40-207ENST00000480698 IKBKEQ14164 716 aa11.29□□□□□ -0.6
TMEM40-207ENST00000480698 CLUL1Q15846 466 aa11.29□□□□□ -0.6
TMEM40-207ENST00000480698 PTGISQ16647 500 aa11.29□□□□□ -0.6
TMEM40-207ENST00000480698 FAM47CQ5HY64 1035 aa11.29□□□□□ -0.6
TMEM40-207ENST00000480698 GDF6Q6KF10 455 aaPredicted RBP11.29□□□□□ -0.6
TMEM40-207ENST00000480698 RPAP2Q8IXW5 612 aaPredicted RBP11.29□□□□□ -0.6
TMEM40-207ENST00000480698 TMEM192Q8IY95 271 aa11.29□□□□□ -0.6
TMEM40-207ENST00000480698 MKL1Q969V6 931 aa11.29□□□□□ -0.6
TMEM40-207ENST00000480698 KIFC2Q96AC6 838 aa11.29□□□□□ -0.6
TMEM40-207ENST00000480698 RMDN1Q96DB5 314 aa11.29□□□□□ -0.6
TMEM40-207ENST00000480698 WDR11Q9BZH6 1224 aa11.29□□□□□ -0.6
TMEM40-207ENST00000480698 LMAN2LQ9H0V9 348 aa11.29□□□□□ -0.6
TMEM40-207ENST00000480698 ATP8A2Q9NTI2 1148 aa11.29□□□□□ -0.6
TMEM40-207ENST00000480698 RNF146Q9NTX7 359 aa11.29□□□□□ -0.6
TMEM40-207ENST00000480698 CD207Q9UJ71 328 aa11.29□□□□□ -0.6
TMEM40-207ENST00000480698 FEM1BQ9UK73 627 aa11.29□□□□□ -0.6
TMEM40-207ENST00000480698 NOB1Q9ULX3 412 aaKnown RBP11.29□□□□□ -0.6
TMEM40-207ENST00000480698 COG6Q9Y2V7 657 aa11.29□□□□□ -0.6
TMEM40-207ENST00000480698 PKD1L2Q7Z442 2459 aa11.28□□□□□ -0.6
TMEM40-207ENST00000480698 NEFLP07196 543 aa11.28□□□□□ -0.6
TMEM40-207ENST00000480698 ADAM15Q13444 863 aa11.28□□□□□ -0.6
TMEM40-207ENST00000480698 TKFCQ3LXA3 575 aa11.28□□□□□ -0.6
TMEM40-207ENST00000480698 FAM117BQ6P1L5 589 aa11.28□□□□□ -0.6
TMEM40-207ENST00000480698 SSH3Q8TE77 659 aa11.28□□□□□ -0.6
TMEM40-207ENST00000480698 CNTNAP3BQ96NU0 1288 aa11.28□□□□□ -0.6
TMEM40-207ENST00000480698 CNTNAP3Q9BZ76 1288 aa11.28□□□□□ -0.6
TMEM40-207ENST00000480698 HOMER2Q9NSB8 354 aa11.28□□□□□ -0.6
TMEM40-207ENST00000480698 CLEC1BQ9P126 229 aa11.28□□□□□ -0.6
TMEM40-207ENST00000480698 RCAN3Q9UKA8 241 aa11.28□□□□□ -0.6
TMEM40-207ENST00000480698 NOP58Q9Y2X3 529 aaKnown RBP11.28□□□□□ -0.6
TMEM40-207ENST00000480698 ZNF532Q9HCE3 1301 aa11.28□□□□□ -0.6
TMEM40-207ENST00000480698 NKRFO15226 690 aaKnown RBP eCLIP11.27□□□□□ -0.61
TMEM40-207ENST00000480698 LINC01565O15544 149 aa11.27□□□□□ -0.61
TMEM40-207ENST00000480698 PRKAB2O43741 272 aa11.27□□□□□ -0.61
TMEM40-207ENST00000480698 PDGFBP01127 241 aaPredicted RBP11.27□□□□□ -0.61
TMEM40-207ENST00000480698 EDNRBP24530 442 aa11.27□□□□□ -0.61
TMEM40-207ENST00000480698 COASYQ13057 564 aa11.27□□□□□ -0.61
TMEM40-207ENST00000480698 CAMK1Q14012 370 aa11.27□□□□□ -0.61
TMEM40-207ENST00000480698 SLC9C2Q5TAH2 1124 aa11.27□□□□□ -0.61
TMEM40-207ENST00000480698 ADSSL1Q8N142 457 aa11.27□□□□□ -0.61
TMEM40-207ENST00000480698 GMCL1P1Q8NEA9 526 aa11.27□□□□□ -0.61
TMEM40-207ENST00000480698 OR6J1Q8NGC5 347 aa11.27□□□□□ -0.61
TMEM40-207ENST00000480698 KAT2BQ92831 832 aa11.27□□□□□ -0.61
TMEM40-207ENST00000480698 WNT8BQ93098 351 aa11.27□□□□□ -0.61
TMEM40-207ENST00000480698 NKD2Q969F2 451 aaPredicted RBP11.27□□□□□ -0.61
TMEM40-207ENST00000480698 TOP1MTQ969P6 601 aa11.27□□□□□ -0.61
TMEM40-207ENST00000480698 PURBQ96QR8 312 aaKnown RBP11.27□□□□□ -0.61
TMEM40-207ENST00000480698 RC3H2Q9HBD1 1191 aaKnown RBP11.27□□□□□ -0.61
TMEM40-207ENST00000480698 GTF2IRD1Q9UHL9 959 aa11.27□□□□□ -0.61
TMEM40-207ENST00000480698 ATRXP46100 2492 aa11.26□□□□□ -0.61
TMEM40-207ENST00000480698 MAP1BP46821 2468 aaKnown RBP11.26□□□□□ -0.61
TMEM40-207ENST00000480698 GNAI2P04899 355 aa11.26□□□□□ -0.61
TMEM40-207ENST00000480698 RB1P06400 928 aa11.26□□□□□ -0.61
TMEM40-207ENST00000480698 RASA1P20936 1047 aa11.26□□□□□ -0.61
TMEM40-207ENST00000480698 GTF2F1P35269 517 aaKnown RBP eCLIP11.26□□□□□ -0.61
TMEM40-207ENST00000480698 SLC4A3P48751 1232 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms