RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 SYNE3Q6ZMZ3 975 aa17.78■□□□□ 0.44
CDK9-203ENST00000480353 SEPT14Q6ZU15 432 aa17.78■□□□□ 0.44
CDK9-203ENST00000480353 ZNF654Q8IZM8 581 aa17.78■□□□□ 0.44
CDK9-203ENST00000480353 TBC1D5Q92609 795 aa17.78■□□□□ 0.44
CDK9-203ENST00000480353 IWS1Q96ST2 819 aa17.78■□□□□ 0.44
CDK9-203ENST00000480353 MTA3Q9BTC8 594 aa17.78■□□□□ 0.44
CDK9-203ENST00000480353 SEZ6LQ9BYH1 1024 aa17.78■□□□□ 0.44
CDK9-203ENST00000480353 SENP2Q9HC62 589 aa17.78■□□□□ 0.44
CDK9-203ENST00000480353 KIAA1217Q5T5P2 1943 aa17.77■□□□□ 0.44
CDK9-203ENST00000480353 PNMA6FA0A0J9YX94 578 aa17.77■□□□□ 0.44
CDK9-203ENST00000480353 CALM1P0DP23 149 aa17.77■□□□□ 0.44
CDK9-203ENST00000480353 CALM2P0DP24 149 aa17.77■□□□□ 0.44
CDK9-203ENST00000480353 CALM3P0DP25 149 aa17.77■□□□□ 0.44
CDK9-203ENST00000480353 EDNRBP24530 442 aa17.77■□□□□ 0.44
CDK9-203ENST00000480353 GNAQP50148 359 aa17.77■□□□□ 0.44
CDK9-203ENST00000480353 ANTXR2P58335 489 aa17.77■□□□□ 0.44
CDK9-203ENST00000480353 TROAPQ12815 778 aa17.77■□□□□ 0.44
CDK9-203ENST00000480353 SAMD3Q8N6K7 520 aa17.77■□□□□ 0.44
CDK9-203ENST00000480353 IGDCC4Q8TDY8 1250 aa17.77■□□□□ 0.44
CDK9-203ENST00000480353 RRP36Q96EU6 259 aaKnown RBP17.77■□□□□ 0.44
CDK9-203ENST00000480353 LY9Q9HBG7 655 aa17.77■□□□□ 0.44
CDK9-203ENST00000480353 MAP3K20Q9NYL2 800 aaKnown RBP17.77■□□□□ 0.44
CDK9-203ENST00000480353 RBM47A0AV96 593 aaKnown RBP17.76■□□□□ 0.43
CDK9-203ENST00000480353 GCOM1H8Y6P7 765 aaPredicted RBP17.76■□□□□ 0.43
CDK9-203ENST00000480353 CTAGE5O15320 804 aa17.76■□□□□ 0.43
CDK9-203ENST00000480353 POLR2MP0CAP2 368 aa17.76■□□□□ 0.43
CDK9-203ENST00000480353 MYCLP12524 364 aaPredicted RBP17.76■□□□□ 0.43
CDK9-203ENST00000480353 PTGS1P23219 599 aa17.76■□□□□ 0.43
CDK9-203ENST00000480353 MTMR8Q96EF0 704 aa17.76■□□□□ 0.43
CDK9-203ENST00000480353 MAP3K14Q99558 947 aa17.76■□□□□ 0.43
CDK9-203ENST00000480353 LZTS2Q9BRK4 669 aa17.76■□□□□ 0.43
CDK9-203ENST00000480353 MYL10Q9BUA6 226 aa17.76■□□□□ 0.43
CDK9-203ENST00000480353 RIOX1Q9H6W3 641 aa17.76■□□□□ 0.43
CDK9-203ENST00000480353 SLC12A7Q9Y666 1083 aa17.76■□□□□ 0.43
CDK9-203ENST00000480353 SH2B2O14492 632 aaPredicted RBP17.75■□□□□ 0.43
CDK9-203ENST00000480353 KPNA6O60684 536 aa17.75■□□□□ 0.43
CDK9-203ENST00000480353 TIMP1P01033 207 aa17.75■□□□□ 0.43
CDK9-203ENST00000480353 CDK7P50613 346 aa17.75■□□□□ 0.43
CDK9-203ENST00000480353 CHMP4BP1P59074 171 aa17.75■□□□□ 0.43
CDK9-203ENST00000480353 NECTIN1Q15223 517 aa17.75■□□□□ 0.43
CDK9-203ENST00000480353 FAM47CQ5HY64 1035 aa17.75■□□□□ 0.43
CDK9-203ENST00000480353 TMEM63BQ5T3F8 832 aa17.75■□□□□ 0.43
CDK9-203ENST00000480353 FCHSD1Q86WN1 690 aa17.75■□□□□ 0.43
CDK9-203ENST00000480353 TMEM199Q8N511 208 aa17.75■□□□□ 0.43
CDK9-203ENST00000480353 CUL5Q93034 780 aa17.75■□□□□ 0.43
CDK9-203ENST00000480353 MTG1Q9BT17 334 aaPredicted RBP17.75■□□□□ 0.43
CDK9-203ENST00000480353 PPP1R12CQ9BZL4 782 aa17.75■□□□□ 0.43
CDK9-203ENST00000480353 PXMP2Q9NR77 195 aa17.75■□□□□ 0.43
CDK9-203ENST00000480353 EIF3JO75822 258 aaKnown RBP17.74■□□□□ 0.43
CDK9-203ENST00000480353 GH1P01241 217 aa17.74■□□□□ 0.43
CDK9-203ENST00000480353 HOXA13P31271 388 aaPredicted RBP17.74■□□□□ 0.43
CDK9-203ENST00000480353 HSD17B4P51659 736 aa17.74■□□□□ 0.43
CDK9-203ENST00000480353 PSMC6P62333 389 aa17.74■□□□□ 0.43
CDK9-203ENST00000480353 FGD1P98174 961 aa17.74■□□□□ 0.43
CDK9-203ENST00000480353 KRT32Q14532 448 aa17.74■□□□□ 0.43
CDK9-203ENST00000480353 SHHQ15465 462 aa17.74■□□□□ 0.43
CDK9-203ENST00000480353 GPR153Q6NV75 609 aa17.74■□□□□ 0.43
CDK9-203ENST00000480353 FAM126BQ8IXS8 530 aa17.74■□□□□ 0.43
CDK9-203ENST00000480353 COPS5Q92905 334 aa17.74■□□□□ 0.43
CDK9-203ENST00000480353 RNPC3Q96LT9 517 aaKnown RBP17.74■□□□□ 0.43
CDK9-203ENST00000480353 NEK1Q96PY6 1258 aa17.74■□□□□ 0.43
CDK9-203ENST00000480353 LRRC2Q9BYS8 371 aa17.74■□□□□ 0.43
CDK9-203ENST00000480353 COL20A1Q9P218 1284 aa17.74■□□□□ 0.43
CDK9-203ENST00000480353 MRVI1Q9Y6F6 885 aa17.74■□□□□ 0.43
CDK9-203ENST00000480353 MYH7BA7E2Y1 1941 aa17.74■□□□□ 0.43
CDK9-203ENST00000480353 PPP1R11O60927 126 aaPredicted RBP17.73■□□□□ 0.43
CDK9-203ENST00000480353 NR3C2P08235 984 aa17.73■□□□□ 0.43
CDK9-203ENST00000480353 LIFRP42702 1097 aa17.73■□□□□ 0.43
CDK9-203ENST00000480353 PPIGQ13427 754 aaKnown RBP eCLIP17.73■□□□□ 0.438e-7■■■□□ 15.1
CDK9-203ENST00000480353 DEFB123Q8N688 67 aa17.73■□□□□ 0.43
CDK9-203ENST00000480353 SPZ1Q9BXG8 430 aa17.73■□□□□ 0.43
CDK9-203ENST00000480353 TBX21Q9UL17 535 aa17.73■□□□□ 0.43
CDK9-203ENST00000480353 CYTH3O43739 400 aa17.72■□□□□ 0.43
CDK9-203ENST00000480353 SUPT20HL2P0C7V6 817 aa17.72■□□□□ 0.43
CDK9-203ENST00000480353 RXRAP19793 462 aa17.72■□□□□ 0.43
CDK9-203ENST00000480353 ITGB8P26012 769 aa17.72■□□□□ 0.43
CDK9-203ENST00000480353 CCND2P30279 289 aa17.72■□□□□ 0.43
CDK9-203ENST00000480353 PURAQ00577 322 aaKnown RBP17.72■□□□□ 0.43
CDK9-203ENST00000480353 LY6KQ17RY6 165 aa17.72■□□□□ 0.43
CDK9-203ENST00000480353 C9orf50Q5SZB4 431 aa17.72■□□□□ 0.43
CDK9-203ENST00000480353 MFSD5Q6N075 450 aa17.72■□□□□ 0.43
CDK9-203ENST00000480353 SMARCC2Q8TAQ2 1214 aa17.72■□□□□ 0.43
CDK9-203ENST00000480353 HIPK3Q9H422 1215 aa17.72■□□□□ 0.43
CDK9-203ENST00000480353 NAP1L2Q9ULW6 460 aaPredicted RBP17.72■□□□□ 0.43
CDK9-203ENST00000480353 NOD1Q9Y239 953 aa17.72■□□□□ 0.43
CDK9-203ENST00000480353 RANBP2P49792 3224 aaKnown RBP17.72■□□□□ 0.43
CDK9-203ENST00000480353 SMARCA1P28370 1054 aa17.71■□□□□ 0.43
CDK9-203ENST00000480353 KCNV1Q6PIU1 500 aa17.71■□□□□ 0.43
CDK9-203ENST00000480353 MICU3Q86XE3 530 aa17.71■□□□□ 0.43
CDK9-203ENST00000480353 RAB11FIP4Q86YS3 637 aa17.71■□□□□ 0.43
CDK9-203ENST00000480353 B4GALT4O60513 344 aa17.7■□□□□ 0.42
CDK9-203ENST00000480353 ARIH2O95376 493 aa17.7■□□□□ 0.42
CDK9-203ENST00000480353 CD4P01730 458 aa17.7■□□□□ 0.42
CDK9-203ENST00000480353 HMGB1P09429 215 aaKnown RBP17.7■□□□□ 0.42
CDK9-203ENST00000480353 CASTP20810 708 aaKnown RBP17.7■□□□□ 0.42
CDK9-203ENST00000480353 PGM5Q15124 567 aa17.7■□□□□ 0.42
CDK9-203ENST00000480353 ZNF697Q5TEC3 545 aa17.7■□□□□ 0.42
CDK9-203ENST00000480353 DHX37Q8IY37 1157 aaKnown RBP17.7■□□□□ 0.42
CDK9-203ENST00000480353 CCDC82Q8N4S0 544 aa17.7■□□□□ 0.42
CDK9-203ENST00000480353 SLC43A3Q8NBI5 491 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms