RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 ACTN1P12814 892 aa8.31□□□□□ -1.08
COL17A1-205ENST00000480127 RFC2P35250 354 aa8.31□□□□□ -1.08
COL17A1-205ENST00000480127 ALDH5A1P51649 535 aaPredicted RBP8.31□□□□□ -1.08
COL17A1-205ENST00000480127 MRPL12P52815 198 aaKnown RBP8.31□□□□□ -1.08
COL17A1-205ENST00000480127 NMIQ13287 307 aaPredicted RBP8.31□□□□□ -1.08
COL17A1-205ENST00000480127 HDAC1Q13547 482 aaPredicted RBP8.31□□□□□ -1.08
COL17A1-205ENST00000480127 BAATQ14032 418 aaPredicted RBP8.31□□□□□ -1.08
COL17A1-205ENST00000480127 NBPF20Q3BBV1 942 aa8.31□□□□□ -1.08
COL17A1-205ENST00000480127 BRDTQ58F21 947 aaPredicted RBP8.31□□□□□ -1.08
COL17A1-205ENST00000480127 RCSD1Q6JBY9 416 aa8.31□□□□□ -1.08
COL17A1-205ENST00000480127 IQCA1Q86XH1 822 aa8.31□□□□□ -1.08
COL17A1-205ENST00000480127 DCAF4Q8WV16 495 aa8.31□□□□□ -1.08
COL17A1-205ENST00000480127 ESR2Q92731 530 aa8.31□□□□□ -1.08
COL17A1-205ENST00000480127 FAM227BQ96M60 508 aa8.31□□□□□ -1.08
COL17A1-205ENST00000480127 MTG1Q9BT17 334 aaPredicted RBP8.31□□□□□ -1.08
COL17A1-205ENST00000480127 WDR11Q9BZH6 1224 aa8.31□□□□□ -1.08
COL17A1-205ENST00000480127 KAT14Q9H8E8 782 aa8.31□□□□□ -1.08
COL17A1-205ENST00000480127 IL17RBQ9NRM6 502 aa8.31□□□□□ -1.08
COL17A1-205ENST00000480127 ADD3Q9UEY8 706 aaKnown RBP8.31□□□□□ -1.08
COL17A1-205ENST00000480127 SCN5AQ14524 2016 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 CCDC171Q6TFL3 1326 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 RAD50Q92878 1312 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 XIRP2A4UGR9 3374 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 A0A0D9SFI3 127 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 LCHNA4D1U4 455 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 FAM86C2PA6NEL3 165 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 KIF28PB7ZC32 967 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 PI4K2BG5E9Z4 385 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 PITPNM1O00562 1244 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 ICAM1P05362 532 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 CALML3P27482 149 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 SLC16A2P36021 539 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 NOVP48745 357 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 CPT1AP50416 773 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 GPNMBQ14956 572 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 IMMTQ16891 758 aaKnown RBP8.3□□□□□ -1.08
COL17A1-205ENST00000480127 CCDC178Q5BJE1 867 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 FAM47CQ5HY64 1035 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 VPS53Q5VIR6 699 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 SYDE2Q5VT97 1194 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 NFRKBQ6P4R8 1299 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 CWC27Q6UX04 472 aaKnown RBP8.3□□□□□ -1.08
COL17A1-205ENST00000480127 CHD1LQ86WJ1 897 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 OR6J1Q8NGC5 347 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 UBAC1Q9BSL1 405 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 FTOQ9C0B1 505 aaKnown RBP eCLIP8.3□□□□□ -1.08
COL17A1-205ENST00000480127 RANBP17Q9H2T7 1088 aaKnown RBP8.3□□□□□ -1.08
COL17A1-205ENST00000480127 INCENPQ9NQS7 918 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 PNMA2Q9UL42 364 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.3□□□□□ -1.08
COL17A1-205ENST00000480127 TRANK1O15050 2925 aa8.3□□□□□ -1.08
COL17A1-205ENST00000480127 LOC102724159A0A0B4J2E5 919 aa8.29□□□□□ -1.08
COL17A1-205ENST00000480127 A6NJR5 290 aa8.29□□□□□ -1.08
COL17A1-205ENST00000480127 NFIBO00712 420 aa8.29□□□□□ -1.08
COL17A1-205ENST00000480127 ORC4O43929 436 aa8.29□□□□□ -1.08
COL17A1-205ENST00000480127 BAIAP3O94812 1187 aa8.29□□□□□ -1.08
COL17A1-205ENST00000480127 FGAP02671 866 aa8.29□□□□□ -1.08
COL17A1-205ENST00000480127 PTPN11Q06124 597 aaPredicted RBP8.29□□□□□ -1.08
COL17A1-205ENST00000480127 PDE4DQ08499 809 aa8.29□□□□□ -1.08
COL17A1-205ENST00000480127 TRDNQ13061 729 aa8.29□□□□□ -1.08
COL17A1-205ENST00000480127 PWP2Q15269 919 aaKnown RBP8.29□□□□□ -1.08
COL17A1-205ENST00000480127 USH1GQ495M9 461 aa8.29□□□□□ -1.08
COL17A1-205ENST00000480127 TTBK2Q6IQ55 1244 aa8.29□□□□□ -1.08
COL17A1-205ENST00000480127 TMCO2Q7Z6W1 182 aaPredicted RBP8.29□□□□□ -1.08
COL17A1-205ENST00000480127 RETREG2Q8NC44 543 aa8.29□□□□□ -1.08
COL17A1-205ENST00000480127 CLEC4DQ8WXI8 215 aa8.29□□□□□ -1.08
COL17A1-205ENST00000480127 COPS5Q92905 334 aa8.29□□□□□ -1.08
COL17A1-205ENST00000480127 CTAGE1Q96RT6 745 aa8.29□□□□□ -1.08
COL17A1-205ENST00000480127 LMCD1Q9NZU5 365 aa8.29□□□□□ -1.08
COL17A1-205ENST00000480127 CTNNA3Q9UI47 895 aa8.29□□□□□ -1.08
COL17A1-205ENST00000480127 NOD1Q9Y239 953 aa8.29□□□□□ -1.08
COL17A1-205ENST00000480127 SCN10AQ9Y5Y9 1956 aa8.28□□□□□ -1.08
COL17A1-205ENST00000480127 TANC1Q9C0D5 1861 aa8.28□□□□□ -1.08
COL17A1-205ENST00000480127 COL4A4P53420 1690 aaPredicted RBP8.28□□□□□ -1.08
COL17A1-205ENST00000480127 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.28□□□□□ -1.08
COL17A1-205ENST00000480127 ERICH2A1L162 156 aa8.28□□□□□ -1.08
COL17A1-205ENST00000480127 RBAK-RBAKDNI3L0D1 243 aa8.28□□□□□ -1.08
COL17A1-205ENST00000480127 NKRFO15226 690 aaKnown RBP eCLIP8.28□□□□□ -1.08
COL17A1-205ENST00000480127 FOXP2O15409 715 aa8.28□□□□□ -1.08
COL17A1-205ENST00000480127 KPNA6O60684 536 aa8.28□□□□□ -1.08
COL17A1-205ENST00000480127 HSPD1P10809 573 aaKnown RBP8.28□□□□□ -1.08
COL17A1-205ENST00000480127 PCP11498 1178 aaKnown RBP8.28□□□□□ -1.08
COL17A1-205ENST00000480127 EDNRBP24530 442 aa8.28□□□□□ -1.08
COL17A1-205ENST00000480127 WDR5P61964 334 aaKnown RBP8.28□□□□□ -1.08
COL17A1-205ENST00000480127 DEFB103AP81534 67 aa8.28□□□□□ -1.08
COL17A1-205ENST00000480127 BFSP2Q13515 415 aa8.28□□□□□ -1.08
COL17A1-205ENST00000480127 TCTN1Q2MV58 587 aa8.28□□□□□ -1.08
COL17A1-205ENST00000480127 BTNL9Q6UXG8 535 aa8.28□□□□□ -1.08
COL17A1-205ENST00000480127 SLC30A10Q6XR72 485 aa8.28□□□□□ -1.08
COL17A1-205ENST00000480127 RNF207Q6ZRF8 634 aa8.28□□□□□ -1.08
COL17A1-205ENST00000480127 EXOC6Q8TAG9 804 aa8.28□□□□□ -1.08
COL17A1-205ENST00000480127 GDPD5Q8WTR4 605 aa8.28□□□□□ -1.08
COL17A1-205ENST00000480127 RUFY2Q8WXA3 655 aa8.28□□□□□ -1.08
COL17A1-205ENST00000480127 TMEM47Q9BQJ4 181 aa8.28□□□□□ -1.08
COL17A1-205ENST00000480127 ZKSCAN3Q9BRR0 538 aa8.28□□□□□ -1.08
COL17A1-205ENST00000480127 SUGCTQ9HAC7 445 aa8.28□□□□□ -1.08
COL17A1-205ENST00000480127 PTPRSQ13332 1948 aa8.27□□□□□ -1.09
COL17A1-205ENST00000480127 KDM4AO75164 1064 aa8.27□□□□□ -1.09
COL17A1-205ENST00000480127 ARIH2O95376 493 aa8.27□□□□□ -1.09
COL17A1-205ENST00000480127 SDSP20132 328 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms