RNA–Protein interactions for RNA: ENST00000479092.5

PTPN7-211, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-211	ENST00000479092	C6orf50	Q9HD87	102 aa		13.65	□□□□□ -0.22
PTPN7-211	ENST00000479092	VTA1	Q9NP79	307 aa		13.65	□□□□□ -0.22
PTPN7-211	ENST00000479092	PAK6	Q9NQU5	681 aa	Predicted RBP	13.65	□□□□□ -0.22
PTPN7-211	ENST00000479092	PXMP2	Q9NR77	195 aa		13.65	□□□□□ -0.22
PTPN7-211	ENST00000479092	VPS54	Q9P1Q0	977 aa		13.65	□□□□□ -0.22
PTPN7-211	ENST00000479092	ORC3	Q9UBD5	711 aa	Predicted RBP	13.65	□□□□□ -0.22
PTPN7-211	ENST00000479092	PLXNA1	Q9UIW2	1896 aa		13.65	□□□□□ -0.22
PTPN7-211	ENST00000479092	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.65	□□□□□ -0.22
PTPN7-211	ENST00000479092	ESYT2	A0FGR8	921 aa		13.64	□□□□□ -0.23
PTPN7-211	ENST00000479092	SMCO2	A6NFE2	343 aa		13.64	□□□□□ -0.23
PTPN7-211	ENST00000479092	SEPT4	O43236	478 aa		13.64	□□□□□ -0.23
PTPN7-211	ENST00000479092	SNAI1	O95863	264 aa	Predicted RBP	13.64	□□□□□ -0.23
PTPN7-211	ENST00000479092	GJB1	P08034	283 aa		13.64	□□□□□ -0.23
PTPN7-211	ENST00000479092	AKR1A1	P14550	325 aa		13.64	□□□□□ -0.23
PTPN7-211	ENST00000479092	GNA11	P29992	359 aa		13.64	□□□□□ -0.23
PTPN7-211	ENST00000479092	UBE2S	Q16763	222 aa		13.64	□□□□□ -0.23
PTPN7-211	ENST00000479092	IFFO2	Q5TF58	517 aa		13.64	□□□□□ -0.23
PTPN7-211	ENST00000479092	TYW1B	Q6NUM6	668 aa		13.64	□□□□□ -0.23
PTPN7-211	ENST00000479092	FBXO16	Q8IX29	292 aa	Predicted RBP	13.64	□□□□□ -0.23
PTPN7-211	ENST00000479092	FAM177A1	Q8N128	213 aa	Predicted RBP	13.64	□□□□□ -0.23
PTPN7-211	ENST00000479092	NSUN7	Q8NE18	718 aa	Known RBP	13.64	□□□□□ -0.23
PTPN7-211	ENST00000479092	BICD2	Q8TD16	824 aa		13.64	□□□□□ -0.23
PTPN7-211	ENST00000479092	IWS1	Q96ST2	819 aa		13.64	□□□□□ -0.23
PTPN7-211	ENST00000479092	RIC8A	Q9NPQ8	531 aa		13.64	□□□□□ -0.23
PTPN7-211	ENST00000479092	SH3GLB2	Q9NR46	395 aa		13.64	□□□□□ -0.23
PTPN7-211	ENST00000479092	DDX20	Q9UHI6	824 aa	Known RBP	13.64	□□□□□ -0.23
PTPN7-211	ENST00000479092	MEIS2	O14770	477 aa		13.63	□□□□□ -0.23
PTPN7-211	ENST00000479092	CTDNEP1	O95476	244 aa		13.63	□□□□□ -0.23
PTPN7-211	ENST00000479092	RARB	P10826	455 aa		13.63	□□□□□ -0.23
PTPN7-211	ENST00000479092	EDNRB	P24530	442 aa		13.63	□□□□□ -0.23
PTPN7-211	ENST00000479092	CCND2	P30279	289 aa		13.63	□□□□□ -0.23
PTPN7-211	ENST00000479092	SOX10	P56693	466 aa		13.63	□□□□□ -0.23
PTPN7-211	ENST00000479092	NLRP5	P59047	1200 aa		13.63	□□□□□ -0.23
PTPN7-211	ENST00000479092	AP3B2	Q13367	1082 aa		13.63	□□□□□ -0.23
PTPN7-211	ENST00000479092	STXBP2	Q15833	593 aa		13.63	□□□□□ -0.23
PTPN7-211	ENST00000479092	PRAMEF19	Q5SWL8	479 aa		13.63	□□□□□ -0.23
PTPN7-211	ENST00000479092	EEPD1	Q7L9B9	569 aa		13.63	□□□□□ -0.23
PTPN7-211	ENST00000479092	REXO1	Q8N1G1	1221 aa	Known RBP	13.63	□□□□□ -0.23
PTPN7-211	ENST00000479092	MORC4	Q8TE76	937 aa		13.63	□□□□□ -0.23
PTPN7-211	ENST00000479092	U2AF1L4	Q8WU68	220 aa	Known RBP	13.63	□□□□□ -0.23
PTPN7-211	ENST00000479092	TMX3	Q96JJ7	454 aa		13.63	□□□□□ -0.23
PTPN7-211	ENST00000479092	PDCD2L	Q9BRP1	358 aa		13.63	□□□□□ -0.23
PTPN7-211	ENST00000479092	LLPH	Q9BRT6	129 aa	Known RBP	13.63	□□□□□ -0.23
PTPN7-211	ENST00000479092	FAM184B	Q9ULE4	1060 aa		13.63	□□□□□ -0.23
PTPN7-211	ENST00000479092	DDX49	Q9Y6V7	483 aa	Known RBP	13.63	□□□□□ -0.23
PTPN7-211	ENST00000479092	LRRC37A2	A6NM11	1700 aa		13.62	□□□□□ -0.23
PTPN7-211	ENST00000479092	JAK2	O60674	1132 aa		13.62	□□□□□ -0.23
PTPN7-211	ENST00000479092	CAPN15	O75808	1086 aa		13.62	□□□□□ -0.23
PTPN7-211	ENST00000479092	FOS	P01100	380 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN7-211	ENST00000479092	NR3C2	P08235	984 aa		13.62	□□□□□ -0.23
PTPN7-211	ENST00000479092	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN7-211	ENST00000479092	HMGN5	P82970	282 aa	Known RBP	13.62	□□□□□ -0.23
PTPN7-211	ENST00000479092	ST3GAL1	Q11201	340 aa		13.62	□□□□□ -0.23
PTPN7-211	ENST00000479092	TRIM29	Q14134	588 aa		13.62	□□□□□ -0.23
PTPN7-211	ENST00000479092	MCTP2	Q6DN12	878 aa		13.62	□□□□□ -0.23
PTPN7-211	ENST00000479092	FAM184A	Q8NB25	1140 aa		13.62	□□□□□ -0.23
PTPN7-211	ENST00000479092	TRPV1	Q8NER1	839 aa		13.62	□□□□□ -0.23
PTPN7-211	ENST00000479092	ALG1	Q9BT22	464 aa		13.62	□□□□□ -0.23
PTPN7-211	ENST00000479092	ZMYND12	Q9H0C1	365 aa		13.62	□□□□□ -0.23
PTPN7-211	ENST00000479092	KIF3A	Q9Y496	699 aa		13.62	□□□□□ -0.23
PTPN7-211	ENST00000479092	FRMPD4	Q14CM0	1322 aa		13.62	□□□□□ -0.23
PTPN7-211	ENST00000479092	LCT	P09848	1927 aa		13.61	□□□□□ -0.23
PTPN7-211	ENST00000479092	CD2BP2	O95400	341 aa	Known RBP	13.61	□□□□□ -0.23
PTPN7-211	ENST00000479092	MYCL	P12524	364 aa	Predicted RBP	13.61	□□□□□ -0.23
PTPN7-211	ENST00000479092	CAPN2	P17655	700 aa		13.61	□□□□□ -0.23
PTPN7-211	ENST00000479092	GJA8	P48165	433 aa		13.61	□□□□□ -0.23
PTPN7-211	ENST00000479092	PGM5	Q15124	567 aa		13.61	□□□□□ -0.23
PTPN7-211	ENST00000479092	CCDC144B	Q3MJ40	725 aa		13.61	□□□□□ -0.23
PTPN7-211	ENST00000479092	GNPTAB	Q3T906	1256 aa		13.61	□□□□□ -0.23
PTPN7-211	ENST00000479092	ANO1	Q5XXA6	986 aa		13.61	□□□□□ -0.23
PTPN7-211	ENST00000479092	GALNT17	Q6IS24	598 aa		13.61	□□□□□ -0.23
PTPN7-211	ENST00000479092	SCFD2	Q8WU76	684 aa		13.61	□□□□□ -0.23
PTPN7-211	ENST00000479092	ANO3	Q9BYT9	981 aa		13.61	□□□□□ -0.23
PTPN7-211	ENST00000479092	BRMS1	Q9HCU9	246 aa		13.61	□□□□□ -0.23
PTPN7-211	ENST00000479092	PCDHA6	Q9UN73	950 aa		13.61	□□□□□ -0.23
PTPN7-211	ENST00000479092	PCDHA8	Q9Y5H6	950 aa		13.61	□□□□□ -0.23
PTPN7-211	ENST00000479092	POTEF	A5A3E0	1075 aa		13.6	□□□□□ -0.23
PTPN7-211	ENST00000479092	SMCHD1	A6NHR9	2005 aa		13.6	□□□□□ -0.23
PTPN7-211	ENST00000479092	EIF3J	O75822	258 aa	Known RBP	13.6	□□□□□ -0.23
PTPN7-211	ENST00000479092	STAM2	O75886	525 aa		13.6	□□□□□ -0.23
PTPN7-211	ENST00000479092	SGPL1	O95470	568 aa		13.6	□□□□□ -0.23
PTPN7-211	ENST00000479092	TFRC	P02786	760 aa	Known RBP	13.6	□□□□□ -0.23
PTPN7-211	ENST00000479092	ADCYAP1R1	P41586	468 aa		13.6	□□□□□ -0.23
PTPN7-211	ENST00000479092	JAKMIP3	Q5VZ66	844 aa		13.6	□□□□□ -0.23
PTPN7-211	ENST00000479092	XRRA1	Q6P2D8	792 aa		13.6	□□□□□ -0.23
PTPN7-211	ENST00000479092	IL31RA	Q8NI17	732 aa		13.6	□□□□□ -0.23
PTPN7-211	ENST00000479092	AIFM3	Q96NN9	605 aa		13.6	□□□□□ -0.23
PTPN7-211	ENST00000479092	KATNBL1	Q9H079	304 aa		13.6	□□□□□ -0.23
PTPN7-211	ENST00000479092	SPC25	Q9HBM1	224 aa		13.6	□□□□□ -0.23
PTPN7-211	ENST00000479092	XPNPEP3	Q9NQH7	507 aa		13.6	□□□□□ -0.23
PTPN7-211	ENST00000479092	PCDHA4	Q9UN74	947 aa		13.6	□□□□□ -0.23
PTPN7-211	ENST00000479092	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.6	□□□□□ -0.23
PTPN7-211	ENST00000479092	DTNB	O60941	627 aa		13.59	□□□□□ -0.23
PTPN7-211	ENST00000479092	MYCN	P04198	464 aa	Predicted RBP	13.59	□□□□□ -0.23
PTPN7-211	ENST00000479092	TNFAIP2	Q03169	654 aa		13.59	□□□□□ -0.23
PTPN7-211	ENST00000479092	TTLL4	Q14679	1199 aa		13.59	□□□□□ -0.23
PTPN7-211	ENST00000479092	PCNX4	Q63HM2	1172 aa		13.59	□□□□□ -0.23
PTPN7-211	ENST00000479092	SEPT14	Q6ZU15	432 aa		13.59	□□□□□ -0.23
PTPN7-211	ENST00000479092	VSIG10L	Q86VR7	867 aa		13.59	□□□□□ -0.23
PTPN7-211	ENST00000479092	HSCB	Q8IWL3	235 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms