RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 CABYRO75952 493 aa14.25□□□□□ -0.13
CLCNKA-205ENST00000477360 TGFB3P10600 412 aa14.25□□□□□ -0.13
CLCNKA-205ENST00000477360 IFNAR1P17181 557 aa14.25□□□□□ -0.13
CLCNKA-205ENST00000477360 ARHGEF16Q5VV41 709 aa14.25□□□□□ -0.13
CLCNKA-205ENST00000477360 CCSAPQ6IQ19 270 aaPredicted RBP14.25□□□□□ -0.13
CLCNKA-205ENST00000477360 VSIG10LQ86VR7 867 aa14.25□□□□□ -0.13
CLCNKA-205ENST00000477360 DIS3LQ8TF46 1054 aaKnown RBP14.25□□□□□ -0.13
CLCNKA-205ENST00000477360 CUL5Q93034 780 aa14.25□□□□□ -0.13
CLCNKA-205ENST00000477360 TCEANC2Q96MN5 208 aa14.25□□□□□ -0.13
CLCNKA-205ENST00000477360 PXMP2Q9NR77 195 aa14.25□□□□□ -0.13
CLCNKA-205ENST00000477360 COL20A1Q9P218 1284 aa14.25□□□□□ -0.13
CLCNKA-205ENST00000477360 FRMPD3Q5JV73 1810 aa14.25□□□□□ -0.13
CLCNKA-205ENST00000477360 SMCHD1A6NHR9 2005 aa14.24□□□□□ -0.13
CLCNKA-205ENST00000477360 ZEB2O60315 1214 aa14.24□□□□□ -0.13
CLCNKA-205ENST00000477360 KPNA6O60684 536 aa14.24□□□□□ -0.13
CLCNKA-205ENST00000477360 NR3C2P08235 984 aa14.24□□□□□ -0.13
CLCNKA-205ENST00000477360 RXRAP19793 462 aa14.24□□□□□ -0.13
CLCNKA-205ENST00000477360 PDIA3P30101 505 aaKnown RBP14.24□□□□□ -0.13
CLCNKA-205ENST00000477360 APOBRQ0VD83 1088 aa14.24□□□□□ -0.13
CLCNKA-205ENST00000477360 TOB2Q14106 344 aaPredicted RBP14.24□□□□□ -0.13
CLCNKA-205ENST00000477360 TTLL4Q14679 1199 aa14.24□□□□□ -0.13
CLCNKA-205ENST00000477360 TBC1D5Q92609 795 aa14.24□□□□□ -0.13
CLCNKA-205ENST00000477360 PURBQ96QR8 312 aaKnown RBP14.24□□□□□ -0.13
CLCNKA-205ENST00000477360 TAAR1Q96RJ0 339 aa14.24□□□□□ -0.13
CLCNKA-205ENST00000477360 PDCD2LQ9BRP1 358 aa14.24□□□□□ -0.13
CLCNKA-205ENST00000477360 RNF26Q9BY78 433 aaPredicted RBP14.24□□□□□ -0.13
CLCNKA-205ENST00000477360 WDR11Q9BZH6 1224 aa14.24□□□□□ -0.13
CLCNKA-205ENST00000477360 AP5M1Q9H0R1 490 aa14.24□□□□□ -0.13
CLCNKA-205ENST00000477360 PSTPIP2Q9H939 334 aa14.24□□□□□ -0.13
CLCNKA-205ENST00000477360 TNRC18O15417 2968 aaPredicted RBP14.24□□□□□ -0.13
CLCNKA-205ENST00000477360 LCTP09848 1927 aa14.23□□□□□ -0.13
CLCNKA-205ENST00000477360 ESYT2A0FGR8 921 aa14.23□□□□□ -0.13
CLCNKA-205ENST00000477360 MEIS2O14770 477 aa14.23□□□□□ -0.13
CLCNKA-205ENST00000477360 PRPF3O43395 683 aaKnown RBP14.23□□□□□ -0.13
CLCNKA-205ENST00000477360 EVI5O60447 810 aa14.23□□□□□ -0.13
CLCNKA-205ENST00000477360 FOSP01100 380 aaPredicted RBP14.23□□□□□ -0.13
CLCNKA-205ENST00000477360 CPA1P15085 419 aa14.23□□□□□ -0.13
CLCNKA-205ENST00000477360 ADCYAP1R1P41586 468 aa14.23□□□□□ -0.13
CLCNKA-205ENST00000477360 ACLYP53396 1101 aa14.23□□□□□ -0.13
CLCNKA-205ENST00000477360 NTRK3Q16288 839 aa14.23□□□□□ -0.13
CLCNKA-205ENST00000477360 PFKFB3Q16875 520 aaPredicted RBP14.23□□□□□ -0.13
CLCNKA-205ENST00000477360 BRDTQ58F21 947 aaPredicted RBP14.23□□□□□ -0.13
CLCNKA-205ENST00000477360 CCDC62Q6P9F0 684 aa14.23□□□□□ -0.13
CLCNKA-205ENST00000477360 CPLX2Q6PUV4 134 aaKnown RBP14.23□□□□□ -0.13
CLCNKA-205ENST00000477360 FBXO16Q8IX29 292 aaPredicted RBP14.23□□□□□ -0.13
CLCNKA-205ENST00000477360 CCDC12Q8WUD4 166 aaPredicted RBP14.23□□□□□ -0.13
CLCNKA-205ENST00000477360 DPF3Q92784 378 aa14.23□□□□□ -0.13
CLCNKA-205ENST00000477360 EMID1Q96A84 441 aaPredicted RBP14.23□□□□□ -0.13
CLCNKA-205ENST00000477360 PDRG1Q9NUG6 133 aa14.23□□□□□ -0.13
CLCNKA-205ENST00000477360 BARHL2Q9NY43 387 aa14.23□□□□□ -0.13
CLCNKA-205ENST00000477360 LRRC37A2A6NM11 1700 aa14.23□□□□□ -0.13
CLCNKA-205ENST00000477360 MYH6P13533 1939 aa14.23□□□□□ -0.13
CLCNKA-205ENST00000477360 MKI67P46013 3256 aaKnown RBP14.22□□□□□ -0.13
CLCNKA-205ENST00000477360 CTAGE5O15320 804 aa14.22□□□□□ -0.13
CLCNKA-205ENST00000477360 ADCY6O43306 1168 aa14.22□□□□□ -0.13
CLCNKA-205ENST00000477360 PGK1P00558 417 aa14.22□□□□□ -0.13
CLCNKA-205ENST00000477360 SMPD1P17405 629 aa14.22□□□□□ -0.13
CLCNKA-205ENST00000477360 CDC27P30260 824 aa14.22□□□□□ -0.13
CLCNKA-205ENST00000477360 CCND2P30279 289 aa14.22□□□□□ -0.13
CLCNKA-205ENST00000477360 ADD1P35611 737 aaKnown RBP14.22□□□□□ -0.13
CLCNKA-205ENST00000477360 CPT1AP50416 773 aa14.22□□□□□ -0.13
CLCNKA-205ENST00000477360 PGM5Q15124 567 aa14.22□□□□□ -0.13
CLCNKA-205ENST00000477360 GNASQ5JWF2 1037 aa14.22□□□□□ -0.13
CLCNKA-205ENST00000477360 GJC2Q5T442 439 aaPredicted RBP14.22□□□□□ -0.13
CLCNKA-205ENST00000477360 TLK2Q86UE8 772 aa14.22□□□□□ -0.13
CLCNKA-205ENST00000477360 GLT1D1Q96MS3 346 aa14.22□□□□□ -0.13
CLCNKA-205ENST00000477360 TOX2Q96NM4 488 aa14.22□□□□□ -0.13
CLCNKA-205ENST00000477360 SENP6Q9GZR1 1112 aaPredicted RBP14.22□□□□□ -0.13
CLCNKA-205ENST00000477360 EHMT1Q9H9B1 1298 aa14.22□□□□□ -0.13
CLCNKA-205ENST00000477360 RIC8AQ9NPQ8 531 aa14.22□□□□□ -0.13
CLCNKA-205ENST00000477360 SH3GLB2Q9NR46 395 aa14.22□□□□□ -0.13
CLCNKA-205ENST00000477360 V9GY48 417 aaPredicted RBP14.22□□□□□ -0.13
CLCNKA-205ENST00000477360 MROH7Q68CQ1 1323 aa14.21□□□□□ -0.13
CLCNKA-205ENST00000477360 A0A1W2PQ45 241 aaPredicted RBP14.21□□□□□ -0.13
CLCNKA-205ENST00000477360 A0A1W2PQY0 241 aa14.21□□□□□ -0.13
CLCNKA-205ENST00000477360 A6NJR5 290 aa14.21□□□□□ -0.13
CLCNKA-205ENST00000477360 CDKL5O76039 1030 aa14.21□□□□□ -0.13
CLCNKA-205ENST00000477360 C6orf222P0C671 652 aaPredicted RBP14.21□□□□□ -0.13
CLCNKA-205ENST00000477360 SCG2P13521 617 aa14.21□□□□□ -0.13
CLCNKA-205ENST00000477360 ICAM3P32942 547 aa14.21□□□□□ -0.13
CLCNKA-205ENST00000477360 RBM25P49756 843 aaKnown RBP14.21□□□□□ -0.13
CLCNKA-205ENST00000477360 AKAP17AQ02040 695 aaKnown RBP14.21□□□□□ -0.13
CLCNKA-205ENST00000477360 KCNA10Q16322 511 aa14.21□□□□□ -0.13
CLCNKA-205ENST00000477360 FSCN1Q16658 493 aaKnown RBP14.21□□□□□ -0.13
CLCNKA-205ENST00000477360 GNPTABQ3T906 1256 aa14.21□□□□□ -0.13
CLCNKA-205ENST00000477360 PCNX4Q63HM2 1172 aa14.21□□□□□ -0.13
CLCNKA-205ENST00000477360 SLC39A5Q6ZMH5 540 aa14.21□□□□□ -0.13
CLCNKA-205ENST00000477360 HEATR3Q7Z4Q2 680 aa14.21□□□□□ -0.13
CLCNKA-205ENST00000477360 CMTR1Q8N1G2 835 aaKnown RBP14.21□□□□□ -0.13
CLCNKA-205ENST00000477360 SMARCC2Q8TAQ2 1214 aa14.21□□□□□ -0.13
CLCNKA-205ENST00000477360 UPF3BQ9BZI7 483 aaKnown RBP14.21□□□□□ -0.13
CLCNKA-205ENST00000477360 UPF2Q9HAU5 1272 aaKnown RBP14.21□□□□□ -0.13
CLCNKA-205ENST00000477360 POLR3EQ9NVU0 708 aa14.21□□□□□ -0.13
CLCNKA-205ENST00000477360 BAZ2BQ9UIF8 2168 aaKnown RBP14.21□□□□□ -0.13
CLCNKA-205ENST00000477360 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.2□□□□□ -0.14
CLCNKA-205ENST00000477360 SPDYE3A6NKU9 549 aa14.2□□□□□ -0.14
CLCNKA-205ENST00000477360 MAFGO15525 162 aa14.2□□□□□ -0.14
CLCNKA-205ENST00000477360 EIF2AK2P19525 551 aaKnown RBP14.2□□□□□ -0.14
CLCNKA-205ENST00000477360 AP3B2Q13367 1082 aa14.2□□□□□ -0.14
CLCNKA-205ENST00000477360 ANO1Q5XXA6 986 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms