RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 Q6ZUG5 572 aa19.99■□□□□ 0.79
SMARCD3-210ENST00000477169 CATIPQ7Z7H3 387 aa19.99■□□□□ 0.79
SMARCD3-210ENST00000477169 ADGRF4Q8IZF3 695 aa19.99■□□□□ 0.79
SMARCD3-210ENST00000477169 ZNF654Q8IZM8 581 aa19.99■□□□□ 0.79
SMARCD3-210ENST00000477169 FBXL16Q8N461 479 aa19.99■□□□□ 0.79
SMARCD3-210ENST00000477169 DNERQ8NFT8 737 aa19.99■□□□□ 0.79
SMARCD3-210ENST00000477169 AGXT2Q9BYV1 514 aa19.99■□□□□ 0.79
SMARCD3-210ENST00000477169 LRRC37A2A6NM11 1700 aa19.99■□□□□ 0.79
SMARCD3-210ENST00000477169 LAMA2P24043 3122 aaKnown RBP19.98■□□□□ 0.79
SMARCD3-210ENST00000477169 RBM47A0AV96 593 aaKnown RBP19.98■□□□□ 0.79
SMARCD3-210ENST00000477169 B4DLN1 442 aa19.98■□□□□ 0.79
SMARCD3-210ENST00000477169 MRPL12P52815 198 aaKnown RBP19.98■□□□□ 0.79
SMARCD3-210ENST00000477169 CDC37Q16543 378 aaPredicted RBP19.98■□□□□ 0.79
SMARCD3-210ENST00000477169 USH1GQ495M9 461 aa19.98■□□□□ 0.79
SMARCD3-210ENST00000477169 DUSP28Q4G0W2 176 aa19.98■□□□□ 0.79
SMARCD3-210ENST00000477169 C9orf50Q5SZB4 431 aa19.98■□□□□ 0.79
SMARCD3-210ENST00000477169 MYL10Q9BUA6 226 aa19.98■□□□□ 0.79
SMARCD3-210ENST00000477169 SEZ6LQ9BYH1 1024 aa19.98■□□□□ 0.79
SMARCD3-210ENST00000477169 UPF2Q9HAU5 1272 aaKnown RBP19.98■□□□□ 0.79
SMARCD3-210ENST00000477169 BRPF3Q9ULD4 1205 aa19.98■□□□□ 0.79
SMARCD3-210ENST00000477169 ABCB11O95342 1321 aa19.98■□□□□ 0.79
SMARCD3-210ENST00000477169 DDAH1O94760 285 aa19.97■□□□□ 0.79
SMARCD3-210ENST00000477169 TIMP1P01033 207 aa19.97■□□□□ 0.79
SMARCD3-210ENST00000477169 FGD1P98174 961 aa19.97■□□□□ 0.79
SMARCD3-210ENST00000477169 GRM4Q14833 912 aa19.97■□□□□ 0.79
SMARCD3-210ENST00000477169 FAM109BQ6ICB4 259 aaPredicted RBP19.97■□□□□ 0.79
SMARCD3-210ENST00000477169 CXCL17Q6UXB2 119 aa19.97■□□□□ 0.79
SMARCD3-210ENST00000477169 Q7L0L9 218 aa19.97■□□□□ 0.79
SMARCD3-210ENST00000477169 STAG2Q8N3U4 1231 aa19.97■□□□□ 0.79
SMARCD3-210ENST00000477169 KIF2CQ99661 725 aa19.97■□□□□ 0.79
SMARCD3-210ENST00000477169 WDR11Q9BZH6 1224 aa19.97■□□□□ 0.79
SMARCD3-210ENST00000477169 MAD2L2Q9UI95 211 aa19.97■□□□□ 0.79
SMARCD3-210ENST00000477169 TBX21Q9UL17 535 aa19.97■□□□□ 0.79
SMARCD3-210ENST00000477169 PALM3A6NDB9 673 aaPredicted RBP19.96■□□□□ 0.79
SMARCD3-210ENST00000477169 TLR3O15455 904 aaKnown RBP19.96■□□□□ 0.79
SMARCD3-210ENST00000477169 EDNRBP24530 442 aa19.96■□□□□ 0.79
SMARCD3-210ENST00000477169 FPGSQ05932 587 aa19.96■□□□□ 0.79
SMARCD3-210ENST00000477169 PDE4DQ08499 809 aa19.96■□□□□ 0.79
SMARCD3-210ENST00000477169 TMEM63BQ5T3F8 832 aa19.96■□□□□ 0.79
SMARCD3-210ENST00000477169 APOA5Q6Q788 366 aa19.96■□□□□ 0.79
SMARCD3-210ENST00000477169 FAM126BQ8IXS8 530 aa19.96■□□□□ 0.79
SMARCD3-210ENST00000477169 SLC43A3Q8NBI5 491 aa19.96■□□□□ 0.79
SMARCD3-210ENST00000477169 BRF1Q92994 677 aa19.96■□□□□ 0.79
SMARCD3-210ENST00000477169 MAP3K14Q99558 947 aa19.96■□□□□ 0.79
SMARCD3-210ENST00000477169 JMJD4Q9H9V9 463 aa19.96■□□□□ 0.79
SMARCD3-210ENST00000477169 PDRG1Q9NUG6 133 aa19.96■□□□□ 0.79
SMARCD3-210ENST00000477169 MTMR10Q9NXD2 777 aa19.96■□□□□ 0.79
SMARCD3-210ENST00000477169 SLC12A7Q9Y666 1083 aa19.96■□□□□ 0.79
SMARCD3-210ENST00000477169 DHX16O60231 1041 aaKnown RBP19.95■□□□□ 0.78
SMARCD3-210ENST00000477169 PTGS1P23219 599 aa19.95■□□□□ 0.78
SMARCD3-210ENST00000477169 APOBRQ0VD83 1088 aa19.95■□□□□ 0.78
SMARCD3-210ENST00000477169 ITGA7Q13683 1181 aa19.95■□□□□ 0.78
SMARCD3-210ENST00000477169 TOB2Q14106 344 aaPredicted RBP19.95■□□□□ 0.78
SMARCD3-210ENST00000477169 QRICH1Q2TAL8 776 aa19.95■□□□□ 0.78
SMARCD3-210ENST00000477169 MCF2L2Q86YR7 1114 aa19.95■□□□□ 0.78
SMARCD3-210ENST00000477169 RAB11FIP4Q86YS3 637 aa19.95■□□□□ 0.78
SMARCD3-210ENST00000477169 TBC1D32Q96NH3 1257 aa19.95■□□□□ 0.78
SMARCD3-210ENST00000477169 VAT1LQ9HCJ6 419 aa19.95■□□□□ 0.78
SMARCD3-210ENST00000477169 KLF18A0A0U1RQI7 1052 aa19.94■□□□□ 0.78
SMARCD3-210ENST00000477169 CD4P01730 458 aa19.94■□□□□ 0.78
SMARCD3-210ENST00000477169 CALM1P0DP23 149 aa19.94■□□□□ 0.78
SMARCD3-210ENST00000477169 CALM2P0DP24 149 aa19.94■□□□□ 0.78
SMARCD3-210ENST00000477169 CALM3P0DP25 149 aa19.94■□□□□ 0.78
SMARCD3-210ENST00000477169 RXRAP19793 462 aa19.94■□□□□ 0.78
SMARCD3-210ENST00000477169 EPHB4P54760 987 aa19.94■□□□□ 0.78
SMARCD3-210ENST00000477169 MFSD5Q6N075 450 aa19.94■□□□□ 0.78
SMARCD3-210ENST00000477169 SYNE3Q6ZMZ3 975 aa19.94■□□□□ 0.78
SMARCD3-210ENST00000477169 FBXO11Q86XK2 927 aa19.94■□□□□ 0.78
SMARCD3-210ENST00000477169 TBC1D5Q92609 795 aa19.94■□□□□ 0.78
SMARCD3-210ENST00000477169 MRPL11Q9Y3B7 192 aaKnown RBP19.94■□□□□ 0.78
SMARCD3-210ENST00000477169 KLRF2D3W0D1 207 aa19.93■□□□□ 0.78
SMARCD3-210ENST00000477169 NKRFO15226 690 aaKnown RBP eCLIP19.93■□□□□ 0.78
SMARCD3-210ENST00000477169 CPT1AP50416 773 aa19.93■□□□□ 0.78
SMARCD3-210ENST00000477169 MICU3Q86XE3 530 aa19.93■□□□□ 0.78
SMARCD3-210ENST00000477169 CTCFLQ8NI51 663 aaPredicted RBP19.93■□□□□ 0.78
SMARCD3-210ENST00000477169 SCFD2Q8WU76 684 aa19.93■□□□□ 0.78
SMARCD3-210ENST00000477169 ALDH8A1Q9H2A2 487 aaPredicted RBP19.93■□□□□ 0.78
SMARCD3-210ENST00000477169 COL6A3P12111 3177 aa19.92■□□□□ 0.78
SMARCD3-210ENST00000477169 ZBTB43O43298 467 aa19.92■□□□□ 0.78
SMARCD3-210ENST00000477169 EVCP57679 992 aa19.92■□□□□ 0.78
SMARCD3-210ENST00000477169 SMAD3P84022 425 aaKnown RBP19.92■□□□□ 0.78
SMARCD3-210ENST00000477169 SLC35G1Q2M3R5 365 aa19.92■□□□□ 0.78
SMARCD3-210ENST00000477169 FANCBQ8NB91 859 aa19.92■□□□□ 0.78
SMARCD3-210ENST00000477169 SYTL5Q8TDW5 730 aaPredicted RBP19.92■□□□□ 0.78
SMARCD3-210ENST00000477169 NSUN6Q8TEA1 469 aaKnown RBP19.92■□□□□ 0.78
SMARCD3-210ENST00000477169 MTMR8Q96EF0 704 aa19.92■□□□□ 0.78
SMARCD3-210ENST00000477169 AMNQ9BXJ7 453 aa19.92■□□□□ 0.78
SMARCD3-210ENST00000477169 POLR3EQ9NVU0 708 aa19.92■□□□□ 0.78
SMARCD3-210ENST00000477169 STXBP5LQ9Y2K9 1186 aa19.92■□□□□ 0.78
SMARCD3-210ENST00000477169 GRIN2DO15399 1336 aa19.92■□□□□ 0.78
SMARCD3-210ENST00000477169 MYH6P13533 1939 aa19.92■□□□□ 0.78
SMARCD3-210ENST00000477169 KIF5BP33176 963 aa19.91■□□□□ 0.78
SMARCD3-210ENST00000477169 NEK4P51957 841 aa19.91■□□□□ 0.78
SMARCD3-210ENST00000477169 RCAN1P53805 252 aa19.91■□□□□ 0.78
SMARCD3-210ENST00000477169 PPIGQ13427 754 aaKnown RBP eCLIP19.91■□□□□ 0.78
SMARCD3-210ENST00000477169 PPP2R5BQ15173 497 aa19.91■□□□□ 0.78
SMARCD3-210ENST00000477169 BRDTQ58F21 947 aaPredicted RBP19.91■□□□□ 0.78
SMARCD3-210ENST00000477169 TMEM199Q8N511 208 aa19.91■□□□□ 0.78
SMARCD3-210ENST00000477169 OR6J1Q8NGC5 347 aa19.91■□□□□ 0.78
SMARCD3-210ENST00000477169 RNPC3Q96LT9 517 aaKnown RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms