RNA–Protein interactions for RNA: ENST00000474689.3

RN7SL40P-201, Transcript of RNA, 7SL, cytoplasmic 40, pseudogene, humanhuman

BASIC

Gene RN7SL40P, Length 342 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL40P-201ENST00000474689 RPS6P62753 249 aaKnown RBP12.79□□□□□ -0.36
RN7SL40P-201ENST00000474689 PPP2R5BQ15173 497 aa12.79□□□□□ -0.36
RN7SL40P-201ENST00000474689 RRP12Q5JTH9 1297 aaKnown RBP12.79□□□□□ -0.36
RN7SL40P-201ENST00000474689 RETREG2Q8NC44 543 aa12.79□□□□□ -0.36
RN7SL40P-201ENST00000474689 TBC1D5Q92609 795 aa12.79□□□□□ -0.36
RN7SL40P-201ENST00000474689 SLC9A7Q96T83 725 aa12.79□□□□□ -0.36
RN7SL40P-201ENST00000474689 TMEM47Q9BQJ4 181 aa12.79□□□□□ -0.36
RN7SL40P-201ENST00000474689 CPVLQ9H3G5 476 aa12.79□□□□□ -0.36
RN7SL40P-201ENST00000474689 C11orf16Q9NQ32 467 aa12.79□□□□□ -0.36
RN7SL40P-201ENST00000474689 ADD3Q9UEY8 706 aaKnown RBP12.79□□□□□ -0.36
RN7SL40P-201ENST00000474689 COL4A4P53420 1690 aaPredicted RBP12.79□□□□□ -0.36
RN7SL40P-201ENST00000474689 A6NJR5 290 aa12.78□□□□□ -0.36
RN7SL40P-201ENST00000474689 TXNP10599 105 aaKnown RBP12.78□□□□□ -0.36
RN7SL40P-201ENST00000474689 EDNRBP24530 442 aa12.78□□□□□ -0.36
RN7SL40P-201ENST00000474689 HOXD11P31277 338 aaPredicted RBP12.78□□□□□ -0.36
RN7SL40P-201ENST00000474689 RFC2P35250 354 aa12.78□□□□□ -0.36
RN7SL40P-201ENST00000474689 DEFB103AP81534 67 aa12.78□□□□□ -0.36
RN7SL40P-201ENST00000474689 PDE4DQ08499 809 aa12.78□□□□□ -0.36
RN7SL40P-201ENST00000474689 GDF6Q6KF10 455 aaPredicted RBP12.78□□□□□ -0.36
RN7SL40P-201ENST00000474689 NFRKBQ6P4R8 1299 aa12.78□□□□□ -0.36
RN7SL40P-201ENST00000474689 RNF207Q6ZRF8 634 aa12.78□□□□□ -0.36
RN7SL40P-201ENST00000474689 PHOSPHO2Q8TCD6 241 aa12.78□□□□□ -0.36
RN7SL40P-201ENST00000474689 GDPD5Q8WTR4 605 aa12.78□□□□□ -0.36
RN7SL40P-201ENST00000474689 DHX38Q92620 1227 aaKnown RBP12.78□□□□□ -0.36
RN7SL40P-201ENST00000474689 HLA-CQ95604 372 aa12.78□□□□□ -0.36
RN7SL40P-201ENST00000474689 TOMM22Q9NS69 142 aa12.78□□□□□ -0.36
RN7SL40P-201ENST00000474689 ANAPC4Q9UJX5 808 aa12.78□□□□□ -0.36
RN7SL40P-201ENST00000474689 PCDHB15Q9Y5E8 787 aa12.78□□□□□ -0.36
RN7SL40P-201ENST00000474689 TTC41PQ6P2S7 1318 aa12.78□□□□□ -0.36
RN7SL40P-201ENST00000474689 PITPNM1O00562 1244 aa12.77□□□□□ -0.37
RN7SL40P-201ENST00000474689 ORC4O43929 436 aa12.77□□□□□ -0.37
RN7SL40P-201ENST00000474689 FGRP09769 529 aa12.77□□□□□ -0.37
RN7SL40P-201ENST00000474689 PDHBP11177 359 aa12.77□□□□□ -0.37
RN7SL40P-201ENST00000474689 TOP1P11387 765 aaKnown RBP12.77□□□□□ -0.37
RN7SL40P-201ENST00000474689 WDR5P61964 334 aaKnown RBP12.77□□□□□ -0.37
RN7SL40P-201ENST00000474689 LY6KQ17RY6 165 aa12.77□□□□□ -0.37
RN7SL40P-201ENST00000474689 LRRFIP1Q32MZ4 808 aaKnown RBP12.77□□□□□ -0.37
RN7SL40P-201ENST00000474689 AFG1LQ8WV93 481 aa12.77□□□□□ -0.37
RN7SL40P-201ENST00000474689 MTUS1Q9ULD2 1270 aa12.77□□□□□ -0.37
RN7SL40P-201ENST00000474689 COG5Q9UP83 839 aa12.77□□□□□ -0.37
RN7SL40P-201ENST00000474689 NOD1Q9Y239 953 aa12.77□□□□□ -0.37
RN7SL40P-201ENST00000474689 FGAP02671 866 aa12.76□□□□□ -0.37
RN7SL40P-201ENST00000474689 GOLGA8HP0CJ92 632 aa12.76□□□□□ -0.37
RN7SL40P-201ENST00000474689 HAND2P61296 217 aa12.76□□□□□ -0.37
RN7SL40P-201ENST00000474689 ZNF543Q08ER8 600 aa12.76□□□□□ -0.37
RN7SL40P-201ENST00000474689 PTGISQ16647 500 aa12.76□□□□□ -0.37
RN7SL40P-201ENST00000474689 USH1GQ495M9 461 aa12.76□□□□□ -0.37
RN7SL40P-201ENST00000474689 PPP4R3BQ5MIZ7 849 aa12.76□□□□□ -0.37
RN7SL40P-201ENST00000474689 CHST3Q7LGC8 479 aa12.76□□□□□ -0.37
RN7SL40P-201ENST00000474689 SCFD2Q8WU76 684 aa12.76□□□□□ -0.37
RN7SL40P-201ENST00000474689 KAT2BQ92831 832 aa12.76□□□□□ -0.37
RN7SL40P-201ENST00000474689 FAM227BQ96M60 508 aa12.76□□□□□ -0.37
RN7SL40P-201ENST00000474689 UBA5Q9GZZ9 404 aa12.76□□□□□ -0.37
RN7SL40P-201ENST00000474689 LOC102724159A0A0B4J2E5 919 aa12.75□□□□□ -0.37
RN7SL40P-201ENST00000474689 KIF28PB7ZC32 967 aa12.75□□□□□ -0.37
RN7SL40P-201ENST00000474689 NKRFO15226 690 aaKnown RBP eCLIP12.75□□□□□ -0.37
RN7SL40P-201ENST00000474689 NBNO60934 754 aa12.75□□□□□ -0.37
RN7SL40P-201ENST00000474689 MMP3P08254 477 aa12.75□□□□□ -0.37
RN7SL40P-201ENST00000474689 MX1P20591 662 aa12.75□□□□□ -0.37
RN7SL40P-201ENST00000474689 PTPN11Q06124 597 aaPredicted RBP12.75□□□□□ -0.37
RN7SL40P-201ENST00000474689 BFSP2Q13515 415 aa12.75□□□□□ -0.37
RN7SL40P-201ENST00000474689 PWP2Q15269 919 aaKnown RBP12.75□□□□□ -0.37
RN7SL40P-201ENST00000474689 TMEM31Q5JXX7 168 aa12.75□□□□□ -0.37
RN7SL40P-201ENST00000474689 FAM117BQ6P1L5 589 aa12.75□□□□□ -0.37
RN7SL40P-201ENST00000474689 CCDC62Q6P9F0 684 aa12.75□□□□□ -0.37
RN7SL40P-201ENST00000474689 SEPT14Q6ZU15 432 aa12.75□□□□□ -0.37
RN7SL40P-201ENST00000474689 WNT8BQ93098 351 aa12.75□□□□□ -0.37
RN7SL40P-201ENST00000474689 TAAR1Q96RJ0 339 aa12.75□□□□□ -0.37
RN7SL40P-201ENST00000474689 SALL3Q9BXA9 1300 aa12.75□□□□□ -0.37
RN7SL40P-201ENST00000474689 SUGCTQ9HAC7 445 aa12.75□□□□□ -0.37
RN7SL40P-201ENST00000474689 COL20A1Q9P218 1284 aa12.75□□□□□ -0.37
RN7SL40P-201ENST00000474689 MUC6Q6W4X9 2439 aa12.74□□□□□ -0.37
RN7SL40P-201ENST00000474689 RAD50Q92878 1312 aa12.74□□□□□ -0.37
RN7SL40P-201ENST00000474689 A0A0D9SFI3 127 aa12.74□□□□□ -0.37
RN7SL40P-201ENST00000474689 KPNA6O60684 536 aa12.74□□□□□ -0.37
RN7SL40P-201ENST00000474689 BAIAP3O94812 1187 aa12.74□□□□□ -0.37
RN7SL40P-201ENST00000474689 KCNJ6P48051 423 aa12.74□□□□□ -0.37
RN7SL40P-201ENST00000474689 ZNF200P98182 395 aaPredicted RBP12.74□□□□□ -0.37
RN7SL40P-201ENST00000474689 ARHGAP1Q07960 439 aa12.74□□□□□ -0.37
RN7SL40P-201ENST00000474689 ALX1Q15699 326 aa12.74□□□□□ -0.37
RN7SL40P-201ENST00000474689 BRDTQ58F21 947 aaPredicted RBP12.74□□□□□ -0.37
RN7SL40P-201ENST00000474689 LRRC8DQ7L1W4 858 aa12.74□□□□□ -0.37
RN7SL40P-201ENST00000474689 ZNF589Q86UQ0 364 aaPredicted RBP12.74□□□□□ -0.37
RN7SL40P-201ENST00000474689 DNERQ8NFT8 737 aa12.74□□□□□ -0.37
RN7SL40P-201ENST00000474689 ZKSCAN3Q9BRR0 538 aa12.74□□□□□ -0.37
RN7SL40P-201ENST00000474689 ZBED2Q9BTP6 218 aa12.74□□□□□ -0.37
RN7SL40P-201ENST00000474689 SORBS3O60504 671 aa12.73□□□□□ -0.37
RN7SL40P-201ENST00000474689 SNHG28P0DPA3 235 aa12.73□□□□□ -0.37
RN7SL40P-201ENST00000474689 CKBP12277 381 aa12.73□□□□□ -0.37
RN7SL40P-201ENST00000474689 SELPP16109 830 aa12.73□□□□□ -0.37
RN7SL40P-201ENST00000474689 HIC1Q14526 733 aa12.73□□□□□ -0.37
RN7SL40P-201ENST00000474689 MBTPS1Q14703 1052 aa12.73□□□□□ -0.37
RN7SL40P-201ENST00000474689 TRAF7Q6Q0C0 670 aa12.73□□□□□ -0.37
RN7SL40P-201ENST00000474689 TBC1D10CQ8IV04 446 aa12.73□□□□□ -0.37
RN7SL40P-201ENST00000474689 ALG1Q9BT22 464 aa12.73□□□□□ -0.37
RN7SL40P-201ENST00000474689 TCP11L1Q9NUJ3 509 aa12.73□□□□□ -0.37
RN7SL40P-201ENST00000474689 HDAC6Q9UBN7 1215 aa12.73□□□□□ -0.37
RN7SL40P-201ENST00000474689 WDR19Q8NEZ3 1342 aa12.72□□□□□ -0.37
RN7SL40P-201ENST00000474689 LINC01553A4QN01 128 aa12.72□□□□□ -0.37
RN7SL40P-201ENST00000474689 GPR37L1O60883 481 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms