RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 SYTL5Q8TDW5 730 aaPredicted RBP21.57■■□□□ 1.04
CCDC171-206ENST00000474193 POLR3EQ9NVU0 708 aa21.57■■□□□ 1.04
CCDC171-206ENST00000474193 DDX49Q9Y6V7 483 aaKnown RBP21.57■■□□□ 1.04
CCDC171-206ENST00000474193 RBM47A0AV96 593 aaKnown RBP21.56■■□□□ 1.04
CCDC171-206ENST00000474193 ARVCFO00192 962 aa21.56■■□□□ 1.04
CCDC171-206ENST00000474193 TBC1D5Q92609 795 aa21.56■■□□□ 1.04
CCDC171-206ENST00000474193 MTMR8Q96EF0 704 aa21.56■■□□□ 1.04
CCDC171-206ENST00000474193 TAAR1Q96RJ0 339 aa21.56■■□□□ 1.04
CCDC171-206ENST00000474193 PIGSQ96S52 555 aa21.56■■□□□ 1.04
CCDC171-206ENST00000474193 TXNP10599 105 aaKnown RBP21.55■■□□□ 1.04
CCDC171-206ENST00000474193 EDNRBP24530 442 aa21.55■■□□□ 1.04
CCDC171-206ENST00000474193 SMARCA1P28370 1054 aa21.55■■□□□ 1.04
CCDC171-206ENST00000474193 LIFRP42702 1097 aa21.55■■□□□ 1.04
CCDC171-206ENST00000474193 CXCL17Q6UXB2 119 aa21.55■■□□□ 1.04
CCDC171-206ENST00000474193 OR6J1Q8NGC5 347 aa21.55■■□□□ 1.04
CCDC171-206ENST00000474193 BADQ92934 168 aa21.55■■□□□ 1.04
CCDC171-206ENST00000474193 RRP36Q96EU6 259 aaKnown RBP21.55■■□□□ 1.04
CCDC171-206ENST00000474193 LY9Q9HBG7 655 aa21.55■■□□□ 1.04
CCDC171-206ENST00000474193 SENP2Q9HC62 589 aa21.55■■□□□ 1.04
CCDC171-206ENST00000474193 SEC63Q9UGP8 760 aaKnown RBP21.55■■□□□ 1.04
CCDC171-206ENST00000474193 SLC12A7Q9Y666 1083 aa21.55■■□□□ 1.04
CCDC171-206ENST00000474193 KPNA6O60684 536 aa21.54■■□□□ 1.04
CCDC171-206ENST00000474193 IRX5P78411 483 aaPredicted RBP21.54■■□□□ 1.04
CCDC171-206ENST00000474193 LRIT3Q3SXY7 679 aa21.54■■□□□ 1.04
CCDC171-206ENST00000474193 TSGA10IPQ3SY00 556 aa21.54■■□□□ 1.04
CCDC171-206ENST00000474193 NEK1Q96PY6 1258 aa21.54■■□□□ 1.04
CCDC171-206ENST00000474193 TRIM43BA6NCK2 446 aa21.53■■□□□ 1.04
CCDC171-206ENST00000474193 GCOM1H8Y6P7 765 aaPredicted RBP21.53■■□□□ 1.04
CCDC171-206ENST00000474193 KIAA0355O15063 1070 aa21.53■■□□□ 1.04
CCDC171-206ENST00000474193 CTAGE5O15320 804 aa21.53■■□□□ 1.04
CCDC171-206ENST00000474193 EIF3JO75822 258 aaKnown RBP21.53■■□□□ 1.04
CCDC171-206ENST00000474193 POLR2MP0CAP2 368 aa21.53■■□□□ 1.04
CCDC171-206ENST00000474193 PSMA5P28066 241 aa21.53■■□□□ 1.04
CCDC171-206ENST00000474193 CDK7P50613 346 aa21.53■■□□□ 1.04
CCDC171-206ENST00000474193 SEPT14Q6ZU15 432 aa21.53■■□□□ 1.04
CCDC171-206ENST00000474193 SH3RF1Q7Z6J0 888 aa21.53■■□□□ 1.04
CCDC171-206ENST00000474193 TRIM43Q96BQ3 446 aaPredicted RBP21.53■■□□□ 1.04
CCDC171-206ENST00000474193 PCDH10Q9P2E7 1040 aa21.53■■□□□ 1.04
CCDC171-206ENST00000474193 SH2B2O14492 632 aaPredicted RBP21.52■■□□□ 1.04
CCDC171-206ENST00000474193 SEC24BO95487 1268 aa21.52■■□□□ 1.04
CCDC171-206ENST00000474193 HMGB1P09429 215 aaKnown RBP21.52■■□□□ 1.04
CCDC171-206ENST00000474193 EIF2AK2P19525 551 aaKnown RBP21.52■■□□□ 1.04
CCDC171-206ENST00000474193 HSD17B4P51659 736 aa21.52■■□□□ 1.04
CCDC171-206ENST00000474193 FAAP100Q0VG06 881 aa21.52■■□□□ 1.04
CCDC171-206ENST00000474193 ITGA7Q13683 1181 aa21.52■■□□□ 1.04
CCDC171-206ENST00000474193 PIBF1Q8WXW3 757 aa21.52■■□□□ 1.04
CCDC171-206ENST00000474193 CUL5Q93034 780 aa21.52■■□□□ 1.04
CCDC171-206ENST00000474193 SPZ1Q9BXG8 430 aa21.52■■□□□ 1.04
CCDC171-206ENST00000474193 LCTP09848 1927 aa21.51■■□□□ 1.03
CCDC171-206ENST00000474193 NR3C2P08235 984 aa21.51■■□□□ 1.03
CCDC171-206ENST00000474193 MYL3P08590 195 aa21.51■■□□□ 1.03
CCDC171-206ENST00000474193 FGD1P98174 961 aa21.51■■□□□ 1.03
CCDC171-206ENST00000474193 RASEFQ8IZ41 740 aa21.51■■□□□ 1.03
CCDC171-206ENST00000474193 KCNB2Q92953 911 aa21.51■■□□□ 1.03
CCDC171-206ENST00000474193 MYL10Q9BUA6 226 aa21.51■■□□□ 1.03
CCDC171-206ENST00000474193 PXMP2Q9NR77 195 aa21.51■■□□□ 1.03
CCDC171-206ENST00000474193 SNX14Q9Y5W7 946 aa21.51■■□□□ 1.03
CCDC171-206ENST00000474193 BAZ2BQ9UIF8 2168 aaKnown RBP21.5■■□□□ 1.03
CCDC171-206ENST00000474193 CYTH3O43739 400 aa21.5■■□□□ 1.03
CCDC171-206ENST00000474193 TIMP1P01033 207 aa21.5■■□□□ 1.03
CCDC171-206ENST00000474193 MYCLP12524 364 aaPredicted RBP21.5■■□□□ 1.03
CCDC171-206ENST00000474193 FPGSQ05932 587 aa21.5■■□□□ 1.03
CCDC171-206ENST00000474193 GPR153Q6NV75 609 aa21.5■■□□□ 1.03
CCDC171-206ENST00000474193 KCNV1Q6PIU1 500 aa21.5■■□□□ 1.03
CCDC171-206ENST00000474193 DHX32Q7L7V1 743 aaKnown RBP21.5■■□□□ 1.03
CCDC171-206ENST00000474193 JAKMIP1Q96N16 626 aaKnown RBP21.5■■□□□ 1.03
CCDC171-206ENST00000474193 MTG1Q9BT17 334 aaPredicted RBP21.5■■□□□ 1.03
CCDC171-206ENST00000474193 COL20A1Q9P218 1284 aa21.5■■□□□ 1.03
CCDC171-206ENST00000474193 PPP1R11O60927 126 aaPredicted RBP21.49■■□□□ 1.03
CCDC171-206ENST00000474193 GH1P01241 217 aa21.49■■□□□ 1.03
CCDC171-206ENST00000474193 GHRHRQ02643 423 aa21.49■■□□□ 1.03
CCDC171-206ENST00000474193 TMEM63BQ5T3F8 832 aa21.49■■□□□ 1.03
CCDC171-206ENST00000474193 FCHSD1Q86WN1 690 aa21.49■■□□□ 1.03
CCDC171-206ENST00000474193 FANCBQ8NB91 859 aa21.49■■□□□ 1.03
CCDC171-206ENST00000474193 SUPT20HL2P0C7V6 817 aa21.48■■□□□ 1.03
CCDC171-206ENST00000474193 CCND2P30279 289 aa21.48■■□□□ 1.03
CCDC171-206ENST00000474193 HOXA13P31271 388 aaPredicted RBP21.48■■□□□ 1.03
CCDC171-206ENST00000474193 ANAPC15P60006 121 aa21.48■■□□□ 1.03
CCDC171-206ENST00000474193 FAM126BQ8IXS8 530 aa21.48■■□□□ 1.03
CCDC171-206ENST00000474193 TMEM199Q8N511 208 aa21.48■■□□□ 1.03
CCDC171-206ENST00000474193 LRRC2Q9BYS8 371 aa21.48■■□□□ 1.03
CCDC171-206ENST00000474193 BACH2Q9BYV9 841 aa21.48■■□□□ 1.03
CCDC171-206ENST00000474193 MRVI1Q9Y6F6 885 aa21.48■■□□□ 1.03
CCDC171-206ENST00000474193 LRRC37A2A6NM11 1700 aa21.48■■□□□ 1.03
CCDC171-206ENST00000474193 DNAH12Q6ZR08 3092 aa21.48■■□□□ 1.03
CCDC171-206ENST00000474193 A6NJR5 290 aa21.47■■□□□ 1.03
CCDC171-206ENST00000474193 ADCK5Q3MIX3 580 aa21.47■■□□□ 1.03
CCDC171-206ENST00000474193 BLOC1S2Q6QNY1 142 aa21.47■■□□□ 1.03
CCDC171-206ENST00000474193 SGMS1Q86VZ5 419 aa21.47■■□□□ 1.03
CCDC171-206ENST00000474193 SLC43A3Q8NBI5 491 aa21.47■■□□□ 1.03
CCDC171-206ENST00000474193 SMARCC2Q8TAQ2 1214 aa21.47■■□□□ 1.03
CCDC171-206ENST00000474193 LRCH3Q96II8 777 aa21.47■■□□□ 1.03
CCDC171-206ENST00000474193 PDCD2LQ9BRP1 358 aa21.47■■□□□ 1.03
CCDC171-206ENST00000474193 C22orf23Q9BZE7 217 aa21.47■■□□□ 1.03
CCDC171-206ENST00000474193 RBM28Q9NW13 759 aaKnown RBP21.47■■□□□ 1.03
CCDC171-206ENST00000474193 SOX1O00570 391 aaPredicted RBP21.46■■□□□ 1.03
CCDC171-206ENST00000474193 OPLAHO14841 1288 aa21.46■■□□□ 1.03
CCDC171-206ENST00000474193 CASTP20810 708 aaKnown RBP21.46■■□□□ 1.03
CCDC171-206ENST00000474193 PTGS1P23219 599 aa21.46■■□□□ 1.03
CCDC171-206ENST00000474193 PURAQ00577 322 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms