RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 SREBF1P36956 1147 aa11.65□□□□□ -0.54
PRPF38A-202ENST00000474048 HSD17B4P51659 736 aa11.65□□□□□ -0.54
PRPF38A-202ENST00000474048 APLP1P51693 650 aa11.65□□□□□ -0.54
PRPF38A-202ENST00000474048 RPS6P62753 249 aaKnown RBP11.65□□□□□ -0.54
PRPF38A-202ENST00000474048 ERVK-9P63128 1117 aa11.65□□□□□ -0.54
PRPF38A-202ENST00000474048 ERVK-24P63145 666 aa11.65□□□□□ -0.54
PRPF38A-202ENST00000474048 PTGDRQ13258 359 aa11.65□□□□□ -0.54
PRPF38A-202ENST00000474048 DEFB115Q30KQ5 88 aa11.65□□□□□ -0.54
PRPF38A-202ENST00000474048 MUM1L1Q5H9M0 696 aa11.65□□□□□ -0.54
PRPF38A-202ENST00000474048 DTHD1Q6ZMT9 781 aa11.65□□□□□ -0.54
PRPF38A-202ENST00000474048 REPS2Q8NFH8 660 aa11.65□□□□□ -0.54
PRPF38A-202ENST00000474048 MRPS27Q92552 414 aaKnown RBP11.65□□□□□ -0.54
PRPF38A-202ENST00000474048 ZFYVE28Q9HCC9 887 aa11.65□□□□□ -0.54
PRPF38A-202ENST00000474048 LMBRD1Q9NUN5 540 aa11.65□□□□□ -0.54
PRPF38A-202ENST00000474048 ADD3Q9UEY8 706 aaKnown RBP11.65□□□□□ -0.54
PRPF38A-202ENST00000474048 MYH7BA7E2Y1 1941 aa11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 TRAK2O60296 914 aa11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 ATXN8OSP0DMR3 200 aa11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 FCER1AP12319 257 aa11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 CCND2P30279 289 aa11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 TOB1P50616 345 aaPredicted RBP11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 SETQ01105 290 aaPredicted RBP11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 MOGSQ13724 837 aa11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 BAATQ14032 418 aaPredicted RBP11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 EARS2Q5JPH6 523 aaKnown RBP11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 ARL6IP4Q66PJ3 421 aaKnown RBP11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 PPP4R3AQ6IN85 833 aa11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 MOXD1Q6UVY6 613 aa11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 SLC30A10Q6XR72 485 aa11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 FAM43AQ8N2R8 423 aa11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 ANKRD13CQ8N6S4 541 aa11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 SHCBP1Q8NEM2 672 aa11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 NSUN6Q8TEA1 469 aaKnown RBP11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 CLEC4DQ8WXI8 215 aa11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 RMDN3Q96TC7 470 aa11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 MMP19Q99542 508 aa11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 PYM1Q9BRP8 204 aaKnown RBP11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 MOV10L1Q9BXT6 1211 aaKnown RBP11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 BTBD7Q9P203 1132 aa11.64□□□□□ -0.55
PRPF38A-202ENST00000474048 TESPA1A2RU30 521 aaPredicted RBP11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 VWA3AA6NCI4 1184 aa11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 POTEB2H3BUK9 544 aa11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 KINO60870 393 aaKnown RBP11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 MYCLP12524 364 aaPredicted RBP11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 ERCC3P19447 782 aa11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 EIF2AK2P19525 551 aaKnown RBP11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 PRPHP41219 470 aa11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 ATP2C1P98194 919 aaPredicted RBP11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 FAM110CQ1W6H9 321 aa11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 KLHL40Q2TBA0 621 aa11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 PRR16Q569H4 304 aa11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 NOM1Q5C9Z4 860 aaKnown RBP11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 ADALQ6DHV7 355 aa11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 CYP4F22Q6NT55 531 aa11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 XRRA1Q6P2D8 792 aa11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 IFNL1Q8IU54 200 aa11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 SLFN12Q8IYM2 578 aa11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 FSIP1Q8NA03 581 aa11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 CDK5RAP3Q96JB5 506 aa11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 CAPNS2Q96L46 248 aa11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 SLC5A4Q9NY91 659 aa11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 HOOK1Q9UJC3 728 aaKnown RBP11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 PCDHA7Q9UN72 937 aa11.63□□□□□ -0.55
PRPF38A-202ENST00000474048 A0A1W2PQ27 194 aa11.62□□□□□ -0.55
PRPF38A-202ENST00000474048 A0A1W2PQ64 194 aa11.62□□□□□ -0.55
PRPF38A-202ENST00000474048 A0A1W2PQD8 194 aa11.62□□□□□ -0.55
PRPF38A-202ENST00000474048 OPLAHO14841 1288 aa11.62□□□□□ -0.55
PRPF38A-202ENST00000474048 TDP2O95551 362 aa11.62□□□□□ -0.55
PRPF38A-202ENST00000474048 MAPK4P31152 587 aa11.62□□□□□ -0.55
PRPF38A-202ENST00000474048 LONP1P36776 959 aaKnown RBP11.62□□□□□ -0.55
PRPF38A-202ENST00000474048 UBXN2AP68543 259 aa11.62□□□□□ -0.55
PRPF38A-202ENST00000474048 PTPAQ15257 358 aa11.62□□□□□ -0.55
PRPF38A-202ENST00000474048 ZRSR1Q15695 479 aaKnown RBP11.62□□□□□ -0.55
PRPF38A-202ENST00000474048 GNPTABQ3T906 1256 aa11.62□□□□□ -0.55
PRPF38A-202ENST00000474048 NLRX1Q86UT6 975 aa11.62□□□□□ -0.55
PRPF38A-202ENST00000474048 DNERQ8NFT8 737 aa11.62□□□□□ -0.55
PRPF38A-202ENST00000474048 SYTL5Q8TDW5 730 aaPredicted RBP11.62□□□□□ -0.55
PRPF38A-202ENST00000474048 A1CFQ9NQ94 594 aaKnown RBP11.62□□□□□ -0.55
PRPF38A-202ENST00000474048 CYP39A1Q9NYL5 469 aa11.62□□□□□ -0.55
PRPF38A-202ENST00000474048 RIPK3Q9Y572 518 aa11.62□□□□□ -0.55
PRPF38A-202ENST00000474048 SRPRBQ9Y5M8 271 aaKnown RBP11.62□□□□□ -0.55
PRPF38A-202ENST00000474048 STK24Q9Y6E0 443 aa11.62□□□□□ -0.55
PRPF38A-202ENST00000474048 MORC2Q9Y6X9 1032 aaPredicted RBP11.62□□□□□ -0.55
PRPF38A-202ENST00000474048 PLXNB2O15031 1838 aa11.61□□□□□ -0.55
PRPF38A-202ENST00000474048 SMCHD1A6NHR9 2005 aa11.61□□□□□ -0.55
PRPF38A-202ENST00000474048 ADAMTS3O15072 1205 aa11.61□□□□□ -0.55
PRPF38A-202ENST00000474048 GADD45BO75293 160 aaPredicted RBP11.61□□□□□ -0.55
PRPF38A-202ENST00000474048 STAM2O75886 525 aa11.61□□□□□ -0.55
PRPF38A-202ENST00000474048 CYP3A4P08684 503 aa11.61□□□□□ -0.55
PRPF38A-202ENST00000474048 PTPREP23469 700 aa11.61□□□□□ -0.55
PRPF38A-202ENST00000474048 UBA7P41226 1012 aa11.61□□□□□ -0.55
PRPF38A-202ENST00000474048 TXKP42681 527 aa11.61□□□□□ -0.55
PRPF38A-202ENST00000474048 GHRHRQ02643 423 aa11.61□□□□□ -0.55
PRPF38A-202ENST00000474048 PDE4DQ08499 809 aa11.61□□□□□ -0.55
PRPF38A-202ENST00000474048 PCNX4Q63HM2 1172 aa11.61□□□□□ -0.55
PRPF38A-202ENST00000474048 PLA2G4DQ86XP0 818 aa11.61□□□□□ -0.55
PRPF38A-202ENST00000474048 ZNF579Q8NAF0 562 aaKnown RBP11.61□□□□□ -0.55
PRPF38A-202ENST00000474048 ERMNQ8TAM6 284 aa11.61□□□□□ -0.55
PRPF38A-202ENST00000474048 TBC1D5Q92609 795 aa11.61□□□□□ -0.55
PRPF38A-202ENST00000474048 CDHR1Q96JP9 859 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms