RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 CDC37Q16543 378 aaPredicted RBP15.82■□□□□ 0.12
CHD3-209ENST00000473376 TMEM63BQ5T3F8 832 aa15.82■□□□□ 0.12
CHD3-209ENST00000473376 CCDC62Q6P9F0 684 aa15.82■□□□□ 0.12
CHD3-209ENST00000473376 ADGRF4Q8IZF3 695 aa15.82■□□□□ 0.12
CHD3-209ENST00000473376 EMID1Q96A84 441 aaPredicted RBP15.82■□□□□ 0.12
CHD3-209ENST00000473376 GAS2L1Q99501 681 aaPredicted RBP15.82■□□□□ 0.12
CHD3-209ENST00000473376 WNT8AQ9H1J5 351 aa15.82■□□□□ 0.12
CHD3-209ENST00000473376 PARNO95453 639 aaKnown RBP15.81■□□□□ 0.12
CHD3-209ENST00000473376 PSMC6P62333 389 aa15.81■□□□□ 0.12
CHD3-209ENST00000473376 STXBP2Q15833 593 aa15.81■□□□□ 0.12
CHD3-209ENST00000473376 PHOSPHO2Q8TCD6 241 aa15.81■□□□□ 0.12
CHD3-209ENST00000473376 MTMR8Q96EF0 704 aa15.81■□□□□ 0.12
CHD3-209ENST00000473376 UBAC1Q9BSL1 405 aa15.81■□□□□ 0.12
CHD3-209ENST00000473376 PCDHA11Q9Y5I1 949 aa15.81■□□□□ 0.12
CHD3-209ENST00000473376 SLC4A7Q9Y6M7 1214 aa15.81■□□□□ 0.12
CHD3-209ENST00000473376 DDX49Q9Y6V7 483 aaKnown RBP15.81■□□□□ 0.12
CHD3-209ENST00000473376 UMODL1Q5DID0 1318 aa15.8■□□□□ 0.12
CHD3-209ENST00000473376 B4E1Z4 1266 aa15.8■□□□□ 0.12
CHD3-209ENST00000473376 EIF3JO75822 258 aaKnown RBP15.8■□□□□ 0.12
CHD3-209ENST00000473376 ACTN1P12814 892 aa15.8■□□□□ 0.12
CHD3-209ENST00000473376 BFSP2Q13515 415 aa15.8■□□□□ 0.12
CHD3-209ENST00000473376 NBPF20Q3BBV1 942 aa15.8■□□□□ 0.12
CHD3-209ENST00000473376 KCNV1Q6PIU1 500 aa15.8■□□□□ 0.12
CHD3-209ENST00000473376 FBXO11Q86XK2 927 aa15.8■□□□□ 0.12
CHD3-209ENST00000473376 SYTL5Q8TDW5 730 aaPredicted RBP15.8■□□□□ 0.12
CHD3-209ENST00000473376 VWCEQ96DN2 955 aa15.8■□□□□ 0.12
CHD3-209ENST00000473376 ZKSCAN3Q9BRR0 538 aa15.8■□□□□ 0.12
CHD3-209ENST00000473376 AMNQ9BXJ7 453 aa15.8■□□□□ 0.12
CHD3-209ENST00000473376 UBA5Q9GZZ9 404 aa15.8■□□□□ 0.12
CHD3-209ENST00000473376 SLC28A3Q9HAS3 691 aa15.8■□□□□ 0.12
CHD3-209ENST00000473376 CXXC1Q9P0U4 656 aaPredicted RBP15.8■□□□□ 0.12
CHD3-209ENST00000473376 SCN10AQ9Y5Y9 1956 aa15.79■□□□□ 0.12
CHD3-209ENST00000473376 GH1P01241 217 aa15.79■□□□□ 0.12
CHD3-209ENST00000473376 MYL3P08590 195 aa15.79■□□□□ 0.12
CHD3-209ENST00000473376 GOLGA8HP0CJ92 632 aa15.79■□□□□ 0.12
CHD3-209ENST00000473376 CCL23P55773 120 aa15.79■□□□□ 0.12
CHD3-209ENST00000473376 RBL2Q08999 1139 aa15.79■□□□□ 0.12
CHD3-209ENST00000473376 QRICH1Q2TAL8 776 aa15.79■□□□□ 0.12
CHD3-209ENST00000473376 USH1GQ495M9 461 aa15.79■□□□□ 0.12
CHD3-209ENST00000473376 CCDC155Q8N6L0 562 aa15.79■□□□□ 0.12
CHD3-209ENST00000473376 CAGE1Q8TC20 777 aa15.79■□□□□ 0.12
CHD3-209ENST00000473376 ATXN2LQ8WWM7 1075 aaKnown RBP15.79■□□□□ 0.12
CHD3-209ENST00000473376 RUFY2Q8WXA3 655 aa15.79■□□□□ 0.12
CHD3-209ENST00000473376 RMDN3Q96TC7 470 aa15.79■□□□□ 0.12
CHD3-209ENST00000473376 JMJD4Q9H9V9 463 aa15.79■□□□□ 0.12
CHD3-209ENST00000473376 TRMT13Q9NUP7 481 aaKnown RBP15.79■□□□□ 0.12
CHD3-209ENST00000473376 CDH23Q9H251 3354 aa15.78■□□□□ 0.12
CHD3-209ENST00000473376 LAMA4Q16363 1823 aa15.78■□□□□ 0.12
CHD3-209ENST00000473376 BAIAP3O94812 1187 aa15.78■□□□□ 0.12
CHD3-209ENST00000473376 IQCF3P0C7M6 154 aa15.78■□□□□ 0.12
CHD3-209ENST00000473376 TGFB3P10600 412 aa15.78■□□□□ 0.12
CHD3-209ENST00000473376 POU3F3P20264 500 aaPredicted RBP15.78■□□□□ 0.12
CHD3-209ENST00000473376 CASTP20810 708 aaKnown RBP15.78■□□□□ 0.12
CHD3-209ENST00000473376 PTGS1P23219 599 aa15.78■□□□□ 0.12
CHD3-209ENST00000473376 PBX2P40425 430 aa15.78■□□□□ 0.12
CHD3-209ENST00000473376 HSD17B4P51659 736 aa15.78■□□□□ 0.12
CHD3-209ENST00000473376 SEC23AQ15436 765 aa15.78■□□□□ 0.12
CHD3-209ENST00000473376 IFIT1BQ5T764 474 aaKnown RBP15.78■□□□□ 0.12
CHD3-209ENST00000473376 STOX1Q6ZVD7 989 aa15.78■□□□□ 0.12
CHD3-209ENST00000473376 OTOP2Q7RTS6 562 aa15.78■□□□□ 0.12
CHD3-209ENST00000473376 RETREG2Q8NC44 543 aa15.78■□□□□ 0.12
CHD3-209ENST00000473376 SLC9A7Q96T83 725 aa15.78■□□□□ 0.12
CHD3-209ENST00000473376 U3KPZ7 1027 aaPredicted RBP15.78■□□□□ 0.12
CHD3-209ENST00000473376 PALM3A6NDB9 673 aaPredicted RBP15.77■□□□□ 0.12
CHD3-209ENST00000473376 GRXCR1A8MXD5 290 aa15.77■□□□□ 0.12
CHD3-209ENST00000473376 ZBTB5O15062 677 aa15.77■□□□□ 0.12
CHD3-209ENST00000473376 ATP2A2P16615 1042 aaKnown RBP15.77■□□□□ 0.12
CHD3-209ENST00000473376 TRDNQ13061 729 aa15.77■□□□□ 0.12
CHD3-209ENST00000473376 LAMC2Q13753 1193 aa15.77■□□□□ 0.12
CHD3-209ENST00000473376 DGKDQ16760 1214 aa15.77■□□□□ 0.12
CHD3-209ENST00000473376 TJAP1Q5JTD0 557 aa15.77■□□□□ 0.12
CHD3-209ENST00000473376 EXOC6Q8TAG9 804 aa15.77■□□□□ 0.12
CHD3-209ENST00000473376 TAAR1Q96RJ0 339 aa15.77■□□□□ 0.12
CHD3-209ENST00000473376 KATNAL1Q9BW62 490 aa15.77■□□□□ 0.12
CHD3-209ENST00000473376 DDX41Q9UJV9 622 aaKnown RBP15.77■□□□□ 0.12
CHD3-209ENST00000473376 KLRF2D3W0D1 207 aa15.76■□□□□ 0.11
CHD3-209ENST00000473376 ARIH2O95376 493 aa15.76■□□□□ 0.11
CHD3-209ENST00000473376 MMP3P08254 477 aa15.76■□□□□ 0.11
CHD3-209ENST00000473376 CYP2C9P11712 490 aa15.76■□□□□ 0.11
CHD3-209ENST00000473376 HOXD8P13378 290 aaPredicted RBP15.76■□□□□ 0.11
CHD3-209ENST00000473376 ARHGAP1Q07960 439 aa15.76■□□□□ 0.11
CHD3-209ENST00000473376 ARHGEF16Q5VV41 709 aa15.76■□□□□ 0.11
CHD3-209ENST00000473376 PPTC7Q8NI37 304 aa15.76■□□□□ 0.11
CHD3-209ENST00000473376 AFAP1L1Q8TED9 768 aa15.76■□□□□ 0.11
CHD3-209ENST00000473376 MTA3Q9BTC8 594 aa15.76■□□□□ 0.11
CHD3-209ENST00000473376 PXMP2Q9NR77 195 aa15.76■□□□□ 0.11
CHD3-209ENST00000473376 COL20A1Q9P218 1284 aa15.76■□□□□ 0.11
CHD3-209ENST00000473376 CHD9Q3L8U1 2897 aa15.75■□□□□ 0.11
CHD3-209ENST00000473376 PPFIA4O75335 1185 aa15.75■□□□□ 0.11
CHD3-209ENST00000473376 NR3C2P08235 984 aa15.75■□□□□ 0.11
CHD3-209ENST00000473376 FAM47CQ5HY64 1035 aa15.75■□□□□ 0.11
CHD3-209ENST00000473376 TTC22Q5TAA0 569 aa15.75■□□□□ 0.11
CHD3-209ENST00000473376 AFG1LQ8WV93 481 aa15.75■□□□□ 0.11
CHD3-209ENST00000473376 TBC1D5Q92609 795 aa15.75■□□□□ 0.11
CHD3-209ENST00000473376 COPS5Q92905 334 aa15.75■□□□□ 0.11
CHD3-209ENST00000473376 SCLYQ96I15 445 aa15.75■□□□□ 0.11
CHD3-209ENST00000473376 MAP3K14Q99558 947 aa15.75■□□□□ 0.11
CHD3-209ENST00000473376 CPVLQ9H3G5 476 aa15.75■□□□□ 0.11
CHD3-209ENST00000473376 RIOX1Q9H6W3 641 aa15.75■□□□□ 0.11
CHD3-209ENST00000473376 MAD2L2Q9UI95 211 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms