RNA–Protein interactions for RNA: ENST00000472431.1

NSMCE4A-207, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 819 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-207ENST00000472431 PPP2R5BQ15173 497 aa16.98■□□□□ 0.31
NSMCE4A-207ENST00000472431 PWP2Q15269 919 aaKnown RBP16.98■□□□□ 0.31
NSMCE4A-207ENST00000472431 MCMDC2Q4G0Z9 681 aa16.98■□□□□ 0.31
NSMCE4A-207ENST00000472431 TBC1D10CQ8IV04 446 aa16.98■□□□□ 0.31
NSMCE4A-207ENST00000472431 UHRF1Q96T88 793 aaPredicted RBP16.98■□□□□ 0.31
NSMCE4A-207ENST00000472431 CERS4Q9HA82 394 aa16.98■□□□□ 0.31
NSMCE4A-207ENST00000472431 A6NJR5 290 aa16.97■□□□□ 0.31
NSMCE4A-207ENST00000472431 GOLGA8HP0CJ92 632 aa16.97■□□□□ 0.31
NSMCE4A-207ENST00000472431 KRT40Q6A162 431 aa16.97■□□□□ 0.31
NSMCE4A-207ENST00000472431 TBC1D5Q92609 795 aa16.97■□□□□ 0.31
NSMCE4A-207ENST00000472431 GPHNQ9NQX3 736 aaPredicted RBP16.97■□□□□ 0.31
NSMCE4A-207ENST00000472431 WDR19Q8NEZ3 1342 aa16.96■□□□□ 0.31
NSMCE4A-207ENST00000472431 PFKMP08237 780 aa16.96■□□□□ 0.31
NSMCE4A-207ENST00000472431 IQCF3P0C7M6 154 aa16.96■□□□□ 0.31
NSMCE4A-207ENST00000472431 TXNP10599 105 aaKnown RBP16.96■□□□□ 0.31
NSMCE4A-207ENST00000472431 USH1GQ495M9 461 aa16.96■□□□□ 0.31
NSMCE4A-207ENST00000472431 TMEM67Q5HYA8 995 aa16.96■□□□□ 0.31
NSMCE4A-207ENST00000472431 SPRED2Q7Z698 418 aa16.96■□□□□ 0.31
NSMCE4A-207ENST00000472431 SCFD2Q8WU76 684 aa16.96■□□□□ 0.31
NSMCE4A-207ENST00000472431 CTAGE1Q96RT6 745 aa16.96■□□□□ 0.31
NSMCE4A-207ENST00000472431 ZKSCAN3Q9BRR0 538 aa16.96■□□□□ 0.31
NSMCE4A-207ENST00000472431 UBA5Q9GZZ9 404 aa16.96■□□□□ 0.31
NSMCE4A-207ENST00000472431 MTCH2Q9Y6C9 303 aa16.96■□□□□ 0.31
NSMCE4A-207ENST00000472431 MYH7BA7E2Y1 1941 aa16.96■□□□□ 0.3
NSMCE4A-207ENST00000472431 LAMA4Q16363 1823 aa16.96■□□□□ 0.3
NSMCE4A-207ENST00000472431 ZMYM6O95789 1325 aa16.96■□□□□ 0.3
NSMCE4A-207ENST00000472431 NEDD4P46934 1319 aa16.96■□□□□ 0.3
NSMCE4A-207ENST00000472431 NKRFO15226 690 aaKnown RBP eCLIP16.95■□□□□ 0.3
NSMCE4A-207ENST00000472431 BMP1P13497 986 aa16.95■□□□□ 0.3
NSMCE4A-207ENST00000472431 CHMP4BP1P59074 171 aa16.95■□□□□ 0.3
NSMCE4A-207ENST00000472431 NFRKBQ6P4R8 1299 aa16.95■□□□□ 0.3
NSMCE4A-207ENST00000472431 DNERQ8NFT8 737 aa16.95■□□□□ 0.3
NSMCE4A-207ENST00000472431 CRBNQ96SW2 442 aa16.95■□□□□ 0.3
NSMCE4A-207ENST00000472431 CCDC171Q6TFL3 1326 aa16.95■□□□□ 0.3
NSMCE4A-207ENST00000472431 PITPNM1O00562 1244 aa16.94■□□□□ 0.3
NSMCE4A-207ENST00000472431 KCNQ1P51787 676 aa16.94■□□□□ 0.3
NSMCE4A-207ENST00000472431 TAP1Q03518 808 aa16.94■□□□□ 0.3
NSMCE4A-207ENST00000472431 GPNMBQ14956 572 aa16.94■□□□□ 0.3
NSMCE4A-207ENST00000472431 CCDC62Q6P9F0 684 aa16.94■□□□□ 0.3
NSMCE4A-207ENST00000472431 MFSD6Q6ZSS7 791 aa16.94■□□□□ 0.3
NSMCE4A-207ENST00000472431 TTC14Q96N46 770 aa16.94■□□□□ 0.3
NSMCE4A-207ENST00000472431 COL20A1Q9P218 1284 aa16.94■□□□□ 0.3
NSMCE4A-207ENST00000472431 COL4A4P53420 1690 aaPredicted RBP16.94■□□□□ 0.3
NSMCE4A-207ENST00000472431 RAD50Q92878 1312 aa16.94■□□□□ 0.3
NSMCE4A-207ENST00000472431 KPNA6O60684 536 aa16.93■□□□□ 0.3
NSMCE4A-207ENST00000472431 ACTN1P12814 892 aa16.93■□□□□ 0.3
NSMCE4A-207ENST00000472431 RFC2P35250 354 aa16.93■□□□□ 0.3
NSMCE4A-207ENST00000472431 RRP1P56182 461 aaKnown RBP16.93■□□□□ 0.3
NSMCE4A-207ENST00000472431 BRDTQ58F21 947 aaPredicted RBP16.93■□□□□ 0.3
NSMCE4A-207ENST00000472431 TMCO2Q7Z6W1 182 aaPredicted RBP16.93■□□□□ 0.3
NSMCE4A-207ENST00000472431 HERC6Q8IVU3 1022 aa16.93■□□□□ 0.3
NSMCE4A-207ENST00000472431 RETREG2Q8NC44 543 aa16.93■□□□□ 0.3
NSMCE4A-207ENST00000472431 AFG1LQ8WV93 481 aa16.93■□□□□ 0.3
NSMCE4A-207ENST00000472431 KAT2BQ92831 832 aa16.93■□□□□ 0.3
NSMCE4A-207ENST00000472431 TAAR1Q96RJ0 339 aa16.93■□□□□ 0.3
NSMCE4A-207ENST00000472431 SLC9A7Q96T83 725 aa16.93■□□□□ 0.3
NSMCE4A-207ENST00000472431 FTOQ9C0B1 505 aaKnown RBP eCLIP16.93■□□□□ 0.3
NSMCE4A-207ENST00000472431 ZBTB47Q9UFB7 747 aaPredicted RBP16.93■□□□□ 0.3
NSMCE4A-207ENST00000472431 POU3F3P20264 500 aaPredicted RBP16.92■□□□□ 0.3
NSMCE4A-207ENST00000472431 PTPN11Q06124 597 aaPredicted RBP16.92■□□□□ 0.3
NSMCE4A-207ENST00000472431 ARHGAP1Q07960 439 aa16.92■□□□□ 0.3
NSMCE4A-207ENST00000472431 SKIV2LQ15477 1246 aaKnown RBP16.92■□□□□ 0.3
NSMCE4A-207ENST00000472431 CDC37Q16543 378 aaPredicted RBP16.92■□□□□ 0.3
NSMCE4A-207ENST00000472431 LY6KQ17RY6 165 aa16.92■□□□□ 0.3
NSMCE4A-207ENST00000472431 GDF6Q6KF10 455 aaPredicted RBP16.92■□□□□ 0.3
NSMCE4A-207ENST00000472431 RGS22Q8NE09 1264 aa16.92■□□□□ 0.3
NSMCE4A-207ENST00000472431 IL27Q8NEV9 243 aa16.92■□□□□ 0.3
NSMCE4A-207ENST00000472431 SYTL5Q8TDW5 730 aaPredicted RBP16.92■□□□□ 0.3
NSMCE4A-207ENST00000472431 ARNTL2Q8WYA1 636 aa16.92■□□□□ 0.3
NSMCE4A-207ENST00000472431 DHX38Q92620 1227 aaKnown RBP16.92■□□□□ 0.3
NSMCE4A-207ENST00000472431 MPHOSPH6Q99547 160 aaKnown RBP16.92■□□□□ 0.3
NSMCE4A-207ENST00000472431 PNMA2Q9UL42 364 aa16.92■□□□□ 0.3
NSMCE4A-207ENST00000472431 LCHNA4D1U4 455 aa16.91■□□□□ 0.3
NSMCE4A-207ENST00000472431 TRIM6-TRIM34B2RNG4 842 aa16.91■□□□□ 0.3
NSMCE4A-207ENST00000472431 MMP3P08254 477 aa16.91■□□□□ 0.3
NSMCE4A-207ENST00000472431 BFSP2Q13515 415 aa16.91■□□□□ 0.3
NSMCE4A-207ENST00000472431 HDAC1Q13547 482 aaPredicted RBP16.91■□□□□ 0.3
NSMCE4A-207ENST00000472431 PTGISQ16647 500 aa16.91■□□□□ 0.3
NSMCE4A-207ENST00000472431 TCTN1Q2MV58 587 aa16.91■□□□□ 0.3
NSMCE4A-207ENST00000472431 SEPT14Q6ZU15 432 aa16.91■□□□□ 0.3
NSMCE4A-207ENST00000472431 CHST3Q7LGC8 479 aa16.91■□□□□ 0.3
NSMCE4A-207ENST00000472431 PHOSPHO2Q8TCD6 241 aa16.91■□□□□ 0.3
NSMCE4A-207ENST00000472431 LNPKQ9C0E8 428 aa16.91■□□□□ 0.3
NSMCE4A-207ENST00000472431 TSPYL2Q9H2G4 693 aaPredicted RBP16.91■□□□□ 0.3
NSMCE4A-207ENST00000472431 NOD1Q9Y239 953 aa16.91■□□□□ 0.3
NSMCE4A-207ENST00000472431 GPATCH4Q5T3I0 446 aaKnown RBP16.9■□□□□ 0.3
NSMCE4A-207ENST00000472431 DGKHQ86XP1 1220 aa16.9■□□□□ 0.3
NSMCE4A-207ENST00000472431 ADGRF4Q8IZF3 695 aa16.9■□□□□ 0.3
NSMCE4A-207ENST00000472431 PNMA1Q8ND90 353 aa16.9■□□□□ 0.3
NSMCE4A-207ENST00000472431 ESR2Q92731 530 aa16.9■□□□□ 0.3
NSMCE4A-207ENST00000472431 RILPL2Q969X0 211 aa16.9■□□□□ 0.3
NSMCE4A-207ENST00000472431 GTPBP6O43824 516 aaPredicted RBP16.89■□□□□ 0.29
NSMCE4A-207ENST00000472431 LPXNO60711 386 aa16.89■□□□□ 0.29
NSMCE4A-207ENST00000472431 KDM4AO75164 1064 aa16.89■□□□□ 0.29
NSMCE4A-207ENST00000472431 GH1P01241 217 aa16.89■□□□□ 0.29
NSMCE4A-207ENST00000472431 PCP11498 1178 aaKnown RBP16.89■□□□□ 0.29
NSMCE4A-207ENST00000472431 WDR5P61964 334 aaKnown RBP16.89■□□□□ 0.29
NSMCE4A-207ENST00000472431 GRB10Q13322 594 aa16.89■□□□□ 0.29
NSMCE4A-207ENST00000472431 QRICH1Q2TAL8 776 aa16.89■□□□□ 0.29
NSMCE4A-207ENST00000472431 TICAM2Q86XR7 235 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms