RNA–Protein interactions for RNA: ENST00000469601.1

RTN4R-205, Transcript of reticulon 4 receptor, humanhuman

TSL 3

Gene RTN4R, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-205ENST00000469601 TLR3O15455 904 aaKnown RBP24.67■■□□□ 1.54
RTN4R-205ENST00000469601 RAG1P15918 1043 aa24.67■■□□□ 1.54
RTN4R-205ENST00000469601 SMARCA1P28370 1054 aa24.67■■□□□ 1.54
RTN4R-205ENST00000469601 CDK7P50613 346 aa24.67■■□□□ 1.54
RTN4R-205ENST00000469601 GHRHRQ02643 423 aa24.67■■□□□ 1.54
RTN4R-205ENST00000469601 TTLL4Q14679 1199 aa24.67■■□□□ 1.54
RTN4R-205ENST00000469601 CXCL17Q6UXB2 119 aa24.67■■□□□ 1.54
RTN4R-205ENST00000469601 SH3RF1Q7Z6J0 888 aa24.67■■□□□ 1.54
RTN4R-205ENST00000469601 PIGSQ96S52 555 aa24.67■■□□□ 1.54
RTN4R-205ENST00000469601 POLR3EQ9NVU0 708 aa24.67■■□□□ 1.54
RTN4R-205ENST00000469601 MCM3APO60318 1980 aa24.66■■□□□ 1.54
RTN4R-205ENST00000469601 PPP1R11O60927 126 aaPredicted RBP24.66■■□□□ 1.54
RTN4R-205ENST00000469601 FAAP100Q0VG06 881 aa24.66■■□□□ 1.54
RTN4R-205ENST00000469601 BADQ92934 168 aa24.66■■□□□ 1.54
RTN4R-205ENST00000469601 SPZ1Q9BXG8 430 aa24.66■■□□□ 1.54
RTN4R-205ENST00000469601 COL20A1Q9P218 1284 aa24.66■■□□□ 1.54
RTN4R-205ENST00000469601 LRRC37A2A6NM11 1700 aa24.66■■□□□ 1.54
RTN4R-205ENST00000469601 CYTH3O43739 400 aa24.65■■□□□ 1.54
RTN4R-205ENST00000469601 TXNP10599 105 aaKnown RBP24.65■■□□□ 1.54
RTN4R-205ENST00000469601 KRT32Q14532 448 aa24.65■■□□□ 1.54
RTN4R-205ENST00000469601 OR6J1Q8NGC5 347 aa24.65■■□□□ 1.54
RTN4R-205ENST00000469601 RRP36Q96EU6 259 aaKnown RBP24.65■■□□□ 1.54
RTN4R-205ENST00000469601 GPHNQ9NQX3 736 aaPredicted RBP24.65■■□□□ 1.54
RTN4R-205ENST00000469601 PCDH10Q9P2E7 1040 aa24.65■■□□□ 1.54
RTN4R-205ENST00000469601 SLC12A7Q9Y666 1083 aa24.65■■□□□ 1.54
RTN4R-205ENST00000469601 GCOM1H8Y6P7 765 aaPredicted RBP24.64■■□□□ 1.54
RTN4R-205ENST00000469601 OPLAHO14841 1288 aa24.64■■□□□ 1.54
RTN4R-205ENST00000469601 KPNA6O60684 536 aa24.64■■□□□ 1.54
RTN4R-205ENST00000469601 EIF3JO75822 258 aaKnown RBP24.64■■□□□ 1.54
RTN4R-205ENST00000469601 POLR2MP0CAP2 368 aa24.64■■□□□ 1.54
RTN4R-205ENST00000469601 ITGA7Q13683 1181 aa24.64■■□□□ 1.54
RTN4R-205ENST00000469601 TSGA10IPQ3SY00 556 aa24.64■■□□□ 1.54
RTN4R-205ENST00000469601 TMEM63BQ5T3F8 832 aa24.64■■□□□ 1.54
RTN4R-205ENST00000469601 GPR153Q6NV75 609 aa24.64■■□□□ 1.54
RTN4R-205ENST00000469601 SYNE3Q6ZMZ3 975 aa24.64■■□□□ 1.54
RTN4R-205ENST00000469601 NEK1Q96PY6 1258 aa24.64■■□□□ 1.54
RTN4R-205ENST00000469601 SEC63Q9UGP8 760 aaKnown RBP24.64■■□□□ 1.54
RTN4R-205ENST00000469601 LCTP09848 1927 aa24.64■■□□□ 1.53
RTN4R-205ENST00000469601 EIF2AK2P19525 551 aaKnown RBP24.63■■□□□ 1.53
RTN4R-205ENST00000469601 SLC35G1Q2M3R5 365 aa24.63■■□□□ 1.53
RTN4R-205ENST00000469601 SLC43A3Q8NBI5 491 aa24.63■■□□□ 1.53
RTN4R-205ENST00000469601 MYL10Q9BUA6 226 aa24.63■■□□□ 1.53
RTN4R-205ENST00000469601 PXMP2Q9NR77 195 aa24.63■■□□□ 1.53
RTN4R-205ENST00000469601 RANBP2P49792 3224 aaKnown RBP24.63■■□□□ 1.53
RTN4R-205ENST00000469601 NR3C2P08235 984 aa24.62■■□□□ 1.53
RTN4R-205ENST00000469601 HMGB1P09429 215 aaKnown RBP24.62■■□□□ 1.53
RTN4R-205ENST00000469601 SGMS1Q86VZ5 419 aa24.62■■□□□ 1.53
RTN4R-205ENST00000469601 FAM126BQ8IXS8 530 aa24.62■■□□□ 1.53
RTN4R-205ENST00000469601 TBX21Q9UL17 535 aa24.62■■□□□ 1.53
RTN4R-205ENST00000469601 SOX1O00570 391 aaPredicted RBP24.61■■□□□ 1.53
RTN4R-205ENST00000469601 TIMP1P01033 207 aa24.61■■□□□ 1.53
RTN4R-205ENST00000469601 PTGS1P23219 599 aa24.61■■□□□ 1.53
RTN4R-205ENST00000469601 CCDC62Q6P9F0 684 aa24.61■■□□□ 1.53
RTN4R-205ENST00000469601 SEPT14Q6ZU15 432 aa24.61■■□□□ 1.53
RTN4R-205ENST00000469601 A6NJR5 290 aa24.6■■□□□ 1.53
RTN4R-205ENST00000469601 FPGSQ05932 587 aa24.6■■□□□ 1.53
RTN4R-205ENST00000469601 DHX32Q7L7V1 743 aaKnown RBP24.6■■□□□ 1.53
RTN4R-205ENST00000469601 LRCH3Q96II8 777 aa24.6■■□□□ 1.53
RTN4R-205ENST00000469601 PDCD2LQ9BRP1 358 aa24.6■■□□□ 1.53
RTN4R-205ENST00000469601 MTG1Q9BT17 334 aaPredicted RBP24.6■■□□□ 1.53
RTN4R-205ENST00000469601 GH1P01241 217 aa24.59■■□□□ 1.53
RTN4R-205ENST00000469601 MYL3P08590 195 aa24.59■■□□□ 1.53
RTN4R-205ENST00000469601 ITGB8P26012 769 aa24.59■■□□□ 1.53
RTN4R-205ENST00000469601 HOXA13P31271 388 aaPredicted RBP24.59■■□□□ 1.53
RTN4R-205ENST00000469601 PURAQ00577 322 aaKnown RBP24.59■■□□□ 1.53
RTN4R-205ENST00000469601 ERICH6BQ5W0A0 696 aa24.59■■□□□ 1.53
RTN4R-205ENST00000469601 KCNV1Q6PIU1 500 aa24.59■■□□□ 1.53
RTN4R-205ENST00000469601 FANCBQ8NB91 859 aa24.59■■□□□ 1.53
RTN4R-205ENST00000469601 PIBF1Q8WXW3 757 aa24.59■■□□□ 1.53
RTN4R-205ENST00000469601 REC8O95072 547 aa24.58■■□□□ 1.53
RTN4R-205ENST00000469601 ARIH2O95376 493 aa24.58■■□□□ 1.53
RTN4R-205ENST00000469601 CD4P01730 458 aa24.58■■□□□ 1.53
RTN4R-205ENST00000469601 CUL5Q93034 780 aa24.58■■□□□ 1.53
RTN4R-205ENST00000469601 LRRC2Q9BYS8 371 aa24.58■■□□□ 1.53
RTN4R-205ENST00000469601 MRVI1Q9Y6F6 885 aa24.58■■□□□ 1.53
RTN4R-205ENST00000469601 SUPT20HL2P0C7V6 817 aa24.57■■□□□ 1.52
RTN4R-205ENST00000469601 CCND2P30279 289 aa24.57■■□□□ 1.52
RTN4R-205ENST00000469601 PSMC6P62333 389 aa24.57■■□□□ 1.52
RTN4R-205ENST00000469601 EXOSC10Q01780 885 aaKnown RBP24.57■■□□□ 1.52
RTN4R-205ENST00000469601 PGM5Q15124 567 aa24.57■■□□□ 1.52
RTN4R-205ENST00000469601 SHHQ15465 462 aa24.57■■□□□ 1.52
RTN4R-205ENST00000469601 LY6KQ17RY6 165 aa24.57■■□□□ 1.52
RTN4R-205ENST00000469601 MFSD5Q6N075 450 aa24.57■■□□□ 1.52
RTN4R-205ENST00000469601 VSIG10LQ86VR7 867 aa24.57■■□□□ 1.52
RTN4R-205ENST00000469601 FCHSD1Q86WN1 690 aa24.57■■□□□ 1.52
RTN4R-205ENST00000469601 RASEFQ8IZ41 740 aa24.57■■□□□ 1.52
RTN4R-205ENST00000469601 TMEM199Q8N511 208 aa24.57■■□□□ 1.52
RTN4R-205ENST00000469601 SRBD1Q8N5C6 995 aaKnown RBP24.57■■□□□ 1.52
RTN4R-205ENST00000469601 COPS5Q92905 334 aa24.57■■□□□ 1.52
RTN4R-205ENST00000469601 RBM28Q9NW13 759 aaKnown RBP24.57■■□□□ 1.52
RTN4R-205ENST00000469601 GRIN2DO15399 1336 aa24.57■■□□□ 1.52
RTN4R-205ENST00000469601 LTBP2Q14767 1821 aa24.56■■□□□ 1.52
RTN4R-205ENST00000469601 PLEKHA8P1O95397 391 aa24.56■■□□□ 1.52
RTN4R-205ENST00000469601 MYCLP12524 364 aaPredicted RBP24.56■■□□□ 1.52
RTN4R-205ENST00000469601 PPIGQ13427 754 aaKnown RBP eCLIP24.56■■□□□ 1.52
RTN4R-205ENST00000469601 COL9A3Q14050 684 aaPredicted RBP24.56■■□□□ 1.52
RTN4R-205ENST00000469601 MICU3Q86XE3 530 aa24.56■■□□□ 1.52
RTN4R-205ENST00000469601 DDX41Q9UJV9 622 aaKnown RBP24.56■■□□□ 1.52
RTN4R-205ENST00000469601 DNAH12Q6ZR08 3092 aa24.56■■□□□ 1.52
RTN4R-205ENST00000469601 STAM2O75886 525 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms