RNA–Protein interactions for RNA: ENST00000468421.1

MSX1-202, Transcript of msh homeobox 1, humanhuman

TSL 3

Gene MSX1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-202ENST00000468421 MORC2Q9Y6X9 1032 aaPredicted RBP12.23□□□□□ -0.45
MSX1-202ENST00000468421 KIAA1217Q5T5P2 1943 aa12.23□□□□□ -0.45
MSX1-202ENST00000468421 FRMPD4Q14CM0 1322 aa12.22□□□□□ -0.45
MSX1-202ENST00000468421 TRAK2O60296 914 aa12.22□□□□□ -0.45
MSX1-202ENST00000468421 BMP15O95972 392 aa12.22□□□□□ -0.45
MSX1-202ENST00000468421 ERCC3P19447 782 aa12.22□□□□□ -0.45
MSX1-202ENST00000468421 PTPREP23469 700 aa12.22□□□□□ -0.45
MSX1-202ENST00000468421 APLP1P51693 650 aa12.22□□□□□ -0.45
MSX1-202ENST00000468421 GRM1Q13255 1194 aa12.22□□□□□ -0.45
MSX1-202ENST00000468421 PAXIP1Q6ZW49 1069 aaPredicted RBP12.22□□□□□ -0.45
MSX1-202ENST00000468421 NCAPG2Q86XI2 1143 aa12.22□□□□□ -0.45
MSX1-202ENST00000468421 POTEDQ86YR6 584 aa12.22□□□□□ -0.45
MSX1-202ENST00000468421 IFNL1Q8IU54 200 aa12.22□□□□□ -0.45
MSX1-202ENST00000468421 SAMD3Q8N6K7 520 aa12.22□□□□□ -0.45
MSX1-202ENST00000468421 ANKRD13CQ8N6S4 541 aa12.22□□□□□ -0.45
MSX1-202ENST00000468421 IL31RAQ8NI17 732 aa12.22□□□□□ -0.45
MSX1-202ENST00000468421 PARK7Q99497 189 aaKnown RBP12.22□□□□□ -0.45
MSX1-202ENST00000468421 PORCNQ9H237 461 aa12.22□□□□□ -0.45
MSX1-202ENST00000468421 GOLPH3LQ9H4A5 285 aa12.22□□□□□ -0.45
MSX1-202ENST00000468421 MAP3K20Q9NYL2 800 aaKnown RBP12.22□□□□□ -0.45
MSX1-202ENST00000468421 CYP39A1Q9NYL5 469 aa12.22□□□□□ -0.45
MSX1-202ENST00000468421 DDX49Q9Y6V7 483 aaKnown RBP12.22□□□□□ -0.45
MSX1-202ENST00000468421 MGAMO43451 1857 aa12.22□□□□□ -0.45
MSX1-202ENST00000468421 PCNTO95613 3336 aa12.22□□□□□ -0.45
MSX1-202ENST00000468421 ZSWIM8A7E2V4 1837 aa12.21□□□□□ -0.45
MSX1-202ENST00000468421 RASSF10A6NK89 507 aa12.21□□□□□ -0.45
MSX1-202ENST00000468421 NEMFO60524 1076 aa12.21□□□□□ -0.45
MSX1-202ENST00000468421 SLC25A27O95847 323 aa12.21□□□□□ -0.45
MSX1-202ENST00000468421 CYP3A4P08684 503 aa12.21□□□□□ -0.45
MSX1-202ENST00000468421 LIG1P18858 919 aa12.21□□□□□ -0.45
MSX1-202ENST00000468421 USP11P51784 963 aa12.21□□□□□ -0.45
MSX1-202ENST00000468421 ORC2Q13416 577 aaPredicted RBP12.21□□□□□ -0.45
MSX1-202ENST00000468421 IL17AQ16552 155 aa12.21□□□□□ -0.45
MSX1-202ENST00000468421 ADALQ6DHV7 355 aa12.21□□□□□ -0.45
MSX1-202ENST00000468421 PPP4R3AQ6IN85 833 aa12.21□□□□□ -0.45
MSX1-202ENST00000468421 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.21□□□□□ -0.45
MSX1-202ENST00000468421 JMYQ8N9B5 988 aa12.21□□□□□ -0.45
MSX1-202ENST00000468421 KRI1Q8N9T8 703 aaKnown RBP12.21□□□□□ -0.45
MSX1-202ENST00000468421 MBOAT7Q96N66 472 aa12.21□□□□□ -0.45
MSX1-202ENST00000468421 CREBZFQ9NS37 354 aa12.21□□□□□ -0.45
MSX1-202ENST00000468421 MORF4L1Q9UBU8 362 aa12.21□□□□□ -0.45
MSX1-202ENST00000468421 SRPRBQ9Y5M8 271 aaKnown RBP12.21□□□□□ -0.45
MSX1-202ENST00000468421 THSD7BQ9C0I4 1608 aa12.21□□□□□ -0.46
MSX1-202ENST00000468421 DOCK5Q9H7D0 1870 aa12.21□□□□□ -0.46
MSX1-202ENST00000468421 ZNF236Q9UL36 1845 aa12.21□□□□□ -0.46
MSX1-202ENST00000468421 MCM3APO60318 1980 aa12.2□□□□□ -0.46
MSX1-202ENST00000468421 CYP3A7-CYP3A51PA0A087WV96 503 aa12.2□□□□□ -0.46
MSX1-202ENST00000468421 A0A1W2PQ27 194 aa12.2□□□□□ -0.46
MSX1-202ENST00000468421 A0A1W2PQ64 194 aa12.2□□□□□ -0.46
MSX1-202ENST00000468421 A0A1W2PQD8 194 aa12.2□□□□□ -0.46
MSX1-202ENST00000468421 FAM86B1E9PN63 330 aa12.2□□□□□ -0.46
MSX1-202ENST00000468421 CUTAO60888 179 aa12.2□□□□□ -0.46
MSX1-202ENST00000468421 AOC2O75106 756 aa12.2□□□□□ -0.46
MSX1-202ENST00000468421 FAM86B2P0C5J1 330 aa12.2□□□□□ -0.46
MSX1-202ENST00000468421 OR52Z1P0C646 297 aa12.2□□□□□ -0.46
MSX1-202ENST00000468421 GCFC2P16383 781 aaKnown RBP12.2□□□□□ -0.46
MSX1-202ENST00000468421 CYP3A7P24462 503 aa12.2□□□□□ -0.46
MSX1-202ENST00000468421 CIITAP33076 1130 aa12.2□□□□□ -0.46
MSX1-202ENST00000468421 GCLCP48506 637 aaPredicted RBP12.2□□□□□ -0.46
MSX1-202ENST00000468421 TAF1CQ15572 869 aaPredicted RBP12.2□□□□□ -0.46
MSX1-202ENST00000468421 KLHL40Q2TBA0 621 aa12.2□□□□□ -0.46
MSX1-202ENST00000468421 SPECC1Q5M775 1068 aa12.2□□□□□ -0.46
MSX1-202ENST00000468421 SHC4Q6S5L8 630 aa12.2□□□□□ -0.46
MSX1-202ENST00000468421 MOXD1Q6UVY6 613 aa12.2□□□□□ -0.46
MSX1-202ENST00000468421 CCAR1Q8IX12 1150 aaKnown RBP12.2□□□□□ -0.46
MSX1-202ENST00000468421 FSIP1Q8NA03 581 aa12.2□□□□□ -0.46
MSX1-202ENST00000468421 SHCBP1Q8NEM2 672 aa12.2□□□□□ -0.46
MSX1-202ENST00000468421 LENG9Q96B70 501 aa12.2□□□□□ -0.46
MSX1-202ENST00000468421 ZFP91Q96JP5 570 aaPredicted RBP12.2□□□□□ -0.46
MSX1-202ENST00000468421 EHMT1Q9H9B1 1298 aa12.2□□□□□ -0.46
MSX1-202ENST00000468421 EFCC1Q9HA90 598 aa12.2□□□□□ -0.46
MSX1-202ENST00000468421 ZCCHC17Q9NP64 241 aaKnown RBP12.2□□□□□ -0.46
MSX1-202ENST00000468421 PXMP2Q9NR77 195 aa12.2□□□□□ -0.46
MSX1-202ENST00000468421 FBXO40Q9UH90 709 aa12.2□□□□□ -0.46
MSX1-202ENST00000468421 DDX25Q9UHL0 483 aaKnown RBP12.2□□□□□ -0.46
MSX1-202ENST00000468421 ASTN1O14525 1302 aa12.19□□□□□ -0.46
MSX1-202ENST00000468421 IGLV3-22A0A075B6J6 115 aa12.19□□□□□ -0.46
MSX1-202ENST00000468421 VWA3AA6NCI4 1184 aa12.19□□□□□ -0.46
MSX1-202ENST00000468421 GOLGA6L4A6NEF3 574 aa12.19□□□□□ -0.46
MSX1-202ENST00000468421 MBD3O95983 291 aa12.19□□□□□ -0.46
MSX1-202ENST00000468421 EIF2AK2P19525 551 aaKnown RBP12.19□□□□□ -0.46
MSX1-202ENST00000468421 COPB2P35606 906 aa12.19□□□□□ -0.46
MSX1-202ENST00000468421 TM4SF4P48230 202 aa12.19□□□□□ -0.46
MSX1-202ENST00000468421 INHBEP58166 350 aa12.19□□□□□ -0.46
MSX1-202ENST00000468421 CNTN2Q02246 1040 aa12.19□□□□□ -0.46
MSX1-202ENST00000468421 SREBF2Q12772 1141 aa12.19□□□□□ -0.46
MSX1-202ENST00000468421 PGM5Q15124 567 aa12.19□□□□□ -0.46
MSX1-202ENST00000468421 CALCRLQ16602 461 aa12.19□□□□□ -0.46
MSX1-202ENST00000468421 FAM110CQ1W6H9 321 aa12.19□□□□□ -0.46
MSX1-202ENST00000468421 DEFB115Q30KQ5 88 aa12.19□□□□□ -0.46
MSX1-202ENST00000468421 RESP18Q5W5W9 173 aa12.19□□□□□ -0.46
MSX1-202ENST00000468421 ARL6IP4Q66PJ3 421 aaKnown RBP12.19□□□□□ -0.46
MSX1-202ENST00000468421 ANKRD35Q8N283 1001 aa12.19□□□□□ -0.46
MSX1-202ENST00000468421 GPRC5AQ8NFJ5 357 aa12.19□□□□□ -0.46
MSX1-202ENST00000468421 CYP2W1Q8TAV3 490 aa12.19□□□□□ -0.46
MSX1-202ENST00000468421 MRPS27Q92552 414 aaKnown RBP12.19□□□□□ -0.46
MSX1-202ENST00000468421 GJA10Q969M2 543 aa12.19□□□□□ -0.46
MSX1-202ENST00000468421 FERMT2Q96AC1 680 aa12.19□□□□□ -0.46
MSX1-202ENST00000468421 CAPNS2Q96L46 248 aa12.19□□□□□ -0.46
MSX1-202ENST00000468421 MTMR9Q96QG7 549 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms