RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 PPP2R5BQ15173 497 aa12.16□□□□□ -0.46
GPNMB-206ENST00000465673 TCTN1Q2MV58 587 aa12.16□□□□□ -0.46
GPNMB-206ENST00000465673 RETREG2Q8NC44 543 aa12.16□□□□□ -0.46
GPNMB-206ENST00000465673 TBC1D5Q92609 795 aa12.16□□□□□ -0.46
GPNMB-206ENST00000465673 FAM122AQ96E09 287 aa12.16□□□□□ -0.46
GPNMB-206ENST00000465673 CTAGE1Q96RT6 745 aa12.16□□□□□ -0.46
GPNMB-206ENST00000465673 SLC9A7Q96T83 725 aa12.16□□□□□ -0.46
GPNMB-206ENST00000465673 ANAPC4Q9UJX5 808 aa12.16□□□□□ -0.46
GPNMB-206ENST00000465673 TRANK1O15050 2925 aa12.16□□□□□ -0.46
GPNMB-206ENST00000465673 SCN10AQ9Y5Y9 1956 aa12.16□□□□□ -0.46
GPNMB-206ENST00000465673 A6NJR5 290 aa12.15□□□□□ -0.46
GPNMB-206ENST00000465673 FGAP02671 866 aa12.15□□□□□ -0.46
GPNMB-206ENST00000465673 FGRP09769 529 aa12.15□□□□□ -0.46
GPNMB-206ENST00000465673 GOLGA8HP0CJ92 632 aa12.15□□□□□ -0.46
GPNMB-206ENST00000465673 TXNP10599 105 aaKnown RBP12.15□□□□□ -0.46
GPNMB-206ENST00000465673 PDHBP11177 359 aa12.15□□□□□ -0.46
GPNMB-206ENST00000465673 MX1P20591 662 aa12.15□□□□□ -0.46
GPNMB-206ENST00000465673 EDNRBP24530 442 aa12.15□□□□□ -0.46
GPNMB-206ENST00000465673 HAND2P61296 217 aa12.15□□□□□ -0.46
GPNMB-206ENST00000465673 AAK1Q2M2I8 961 aa12.15□□□□□ -0.46
GPNMB-206ENST00000465673 USH1GQ495M9 461 aa12.15□□□□□ -0.46
GPNMB-206ENST00000465673 PPP4R3BQ5MIZ7 849 aa12.15□□□□□ -0.46
GPNMB-206ENST00000465673 NFRKBQ6P4R8 1299 aa12.15□□□□□ -0.46
GPNMB-206ENST00000465673 PHOSPHO2Q8TCD6 241 aa12.15□□□□□ -0.46
GPNMB-206ENST00000465673 AFG1LQ8WV93 481 aa12.15□□□□□ -0.46
GPNMB-206ENST00000465673 FAM227BQ96M60 508 aa12.15□□□□□ -0.46
GPNMB-206ENST00000465673 LRFN3Q9BTN0 628 aa12.15□□□□□ -0.46
GPNMB-206ENST00000465673 PITPNM1O00562 1244 aa12.14□□□□□ -0.47
GPNMB-206ENST00000465673 RFC2P35250 354 aa12.14□□□□□ -0.47
GPNMB-206ENST00000465673 DEFB103AP81534 67 aa12.14□□□□□ -0.47
GPNMB-206ENST00000465673 ZNF543Q08ER8 600 aa12.14□□□□□ -0.47
GPNMB-206ENST00000465673 PTGISQ16647 500 aa12.14□□□□□ -0.47
GPNMB-206ENST00000465673 LY6KQ17RY6 165 aa12.14□□□□□ -0.47
GPNMB-206ENST00000465673 GDF6Q6KF10 455 aaPredicted RBP12.14□□□□□ -0.47
GPNMB-206ENST00000465673 CHST3Q7LGC8 479 aa12.14□□□□□ -0.47
GPNMB-206ENST00000465673 SCFD2Q8WU76 684 aa12.14□□□□□ -0.47
GPNMB-206ENST00000465673 DHX38Q92620 1227 aaKnown RBP12.14□□□□□ -0.47
GPNMB-206ENST00000465673 C1QTNF1Q9BXJ1 281 aa12.14□□□□□ -0.47
GPNMB-206ENST00000465673 UBA5Q9GZZ9 404 aa12.14□□□□□ -0.47
GPNMB-206ENST00000465673 CD320Q9NPF0 282 aa12.14□□□□□ -0.47
GPNMB-206ENST00000465673 MTUS1Q9ULD2 1270 aa12.14□□□□□ -0.47
GPNMB-206ENST00000465673 NOD1Q9Y239 953 aa12.14□□□□□ -0.47
GPNMB-206ENST00000465673 SALL3Q9BXA9 1300 aa12.13□□□□□ -0.47
GPNMB-206ENST00000465673 PTPRSQ13332 1948 aa12.13□□□□□ -0.47
GPNMB-206ENST00000465673 TRIP12Q14669 1992 aaPredicted RBP12.13□□□□□ -0.47
GPNMB-206ENST00000465673 A0A0D9SFI3 127 aa12.13□□□□□ -0.47
GPNMB-206ENST00000465673 FAM86C2PA6NEL3 165 aa12.13□□□□□ -0.47
GPNMB-206ENST00000465673 WDR5P61964 334 aaKnown RBP12.13□□□□□ -0.47
GPNMB-206ENST00000465673 BFSP2Q13515 415 aa12.13□□□□□ -0.47
GPNMB-206ENST00000465673 ALX1Q15699 326 aa12.13□□□□□ -0.47
GPNMB-206ENST00000465673 BRDTQ58F21 947 aaPredicted RBP12.13□□□□□ -0.47
GPNMB-206ENST00000465673 FAM117BQ6P1L5 589 aa12.13□□□□□ -0.47
GPNMB-206ENST00000465673 CCDC62Q6P9F0 684 aa12.13□□□□□ -0.47
GPNMB-206ENST00000465673 SEPT14Q6ZU15 432 aa12.13□□□□□ -0.47
GPNMB-206ENST00000465673 GDPD5Q8WTR4 605 aa12.13□□□□□ -0.47
GPNMB-206ENST00000465673 KAT2BQ92831 832 aa12.13□□□□□ -0.47
GPNMB-206ENST00000465673 HLA-CQ95604 372 aa12.13□□□□□ -0.47
GPNMB-206ENST00000465673 TAAR1Q96RJ0 339 aa12.13□□□□□ -0.47
GPNMB-206ENST00000465673 ZKSCAN3Q9BRR0 538 aa12.13□□□□□ -0.47
GPNMB-206ENST00000465673 COL20A1Q9P218 1284 aa12.13□□□□□ -0.47
GPNMB-206ENST00000465673 RAD50Q92878 1312 aa12.12□□□□□ -0.47
GPNMB-206ENST00000465673 LOC102724159A0A0B4J2E5 919 aa12.12□□□□□ -0.47
GPNMB-206ENST00000465673 KIF28PB7ZC32 967 aa12.12□□□□□ -0.47
GPNMB-206ENST00000465673 NKRFO15226 690 aaKnown RBP eCLIP12.12□□□□□ -0.47
GPNMB-206ENST00000465673 KPNA6O60684 536 aa12.12□□□□□ -0.47
GPNMB-206ENST00000465673 NBNO60934 754 aa12.12□□□□□ -0.47
GPNMB-206ENST00000465673 MMP3P08254 477 aa12.12□□□□□ -0.47
GPNMB-206ENST00000465673 ARHGAP1Q07960 439 aa12.12□□□□□ -0.47
GPNMB-206ENST00000465673 PWP2Q15269 919 aaKnown RBP12.12□□□□□ -0.47
GPNMB-206ENST00000465673 ZNF589Q86UQ0 364 aaPredicted RBP12.12□□□□□ -0.47
GPNMB-206ENST00000465673 TBC1D10CQ8IV04 446 aa12.12□□□□□ -0.47
GPNMB-206ENST00000465673 DNERQ8NFT8 737 aa12.12□□□□□ -0.47
GPNMB-206ENST00000465673 C11orf16Q9NQ32 467 aa12.12□□□□□ -0.47
GPNMB-206ENST00000465673 TCP11L1Q9NUJ3 509 aa12.12□□□□□ -0.47
GPNMB-206ENST00000465673 COG5Q9UP83 839 aa12.12□□□□□ -0.47
GPNMB-206ENST00000465673 BRWD1Q9NSI6 2320 aa12.12□□□□□ -0.47
GPNMB-206ENST00000465673 TANC1Q9C0D5 1861 aa12.11□□□□□ -0.47
GPNMB-206ENST00000465673 SNHG28P0DPA3 235 aa12.11□□□□□ -0.47
GPNMB-206ENST00000465673 HSPD1P10809 573 aaKnown RBP12.11□□□□□ -0.47
GPNMB-206ENST00000465673 KCNJ6P48051 423 aa12.11□□□□□ -0.47
GPNMB-206ENST00000465673 ZNF200P98182 395 aaPredicted RBP12.11□□□□□ -0.47
GPNMB-206ENST00000465673 PTPN11Q06124 597 aaPredicted RBP12.11□□□□□ -0.47
GPNMB-206ENST00000465673 ANKRD45Q5TZF3 282 aa12.11□□□□□ -0.47
GPNMB-206ENST00000465673 LRRC8DQ7L1W4 858 aa12.11□□□□□ -0.47
GPNMB-206ENST00000465673 SYTL5Q8TDW5 730 aaPredicted RBP12.11□□□□□ -0.47
GPNMB-206ENST00000465673 WNT8BQ93098 351 aa12.11□□□□□ -0.47
GPNMB-206ENST00000465673 EVI5LQ96CN4 794 aa12.11□□□□□ -0.47
GPNMB-206ENST00000465673 ALG1Q9BT22 464 aa12.11□□□□□ -0.47
GPNMB-206ENST00000465673 ZBED2Q9BTP6 218 aa12.11□□□□□ -0.47
GPNMB-206ENST00000465673 SUGCTQ9HAC7 445 aa12.11□□□□□ -0.47
GPNMB-206ENST00000465673 HELLSQ9NRZ9 838 aa12.11□□□□□ -0.47
GPNMB-206ENST00000465673 HDAC6Q9UBN7 1215 aa12.11□□□□□ -0.47
GPNMB-206ENST00000465673 WDR19Q8NEZ3 1342 aa12.11□□□□□ -0.47
GPNMB-206ENST00000465673 COL4A4P53420 1690 aaPredicted RBP12.1□□□□□ -0.47
GPNMB-206ENST00000465673 SORBS3O60504 671 aa12.1□□□□□ -0.47
GPNMB-206ENST00000465673 BAIAP3O94812 1187 aa12.1□□□□□ -0.47
GPNMB-206ENST00000465673 GH1P01241 217 aa12.1□□□□□ -0.47
GPNMB-206ENST00000465673 CKBP12277 381 aa12.1□□□□□ -0.47
GPNMB-206ENST00000465673 SELPP16109 830 aa12.1□□□□□ -0.47
GPNMB-206ENST00000465673 HOXD11P31277 338 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms