RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 THEGQ9P2T0 379 aa27.22■■□□□ 1.95
SSNA1-203ENST00000463511 TET1Q8NFU7 2136 aa27.22■■□□□ 1.95
SSNA1-203ENST00000463511 TRANK1O15050 2925 aa27.21■■□□□ 1.95
SSNA1-203ENST00000463511 WDR19Q8NEZ3 1342 aa27.21■■□□□ 1.95
SSNA1-203ENST00000463511 TRIM6-TRIM34B2RNG4 842 aa27.21■■□□□ 1.95
SSNA1-203ENST00000463511 SNHG28P0DPA3 235 aa27.21■■□□□ 1.95
SSNA1-203ENST00000463511 DEFB128Q7Z7B8 93 aa27.21■■□□□ 1.95
SSNA1-203ENST00000463511 PNMA2Q9UL42 364 aa27.21■■□□□ 1.95
SSNA1-203ENST00000463511 NEDD4P46934 1319 aa27.2■■□□□ 1.95
SSNA1-203ENST00000463511 RAD50Q92878 1312 aa27.2■■□□□ 1.95
SSNA1-203ENST00000463511 EDNRBP24530 442 aa27.2■■□□□ 1.94
SSNA1-203ENST00000463511 TTLL4Q14679 1199 aa27.2■■□□□ 1.94
SSNA1-203ENST00000463511 NBPF20Q3BBV1 942 aa27.2■■□□□ 1.94
SSNA1-203ENST00000463511 USH1GQ495M9 461 aa27.2■■□□□ 1.94
SSNA1-203ENST00000463511 SCFD2Q8WU76 684 aa27.2■■□□□ 1.94
SSNA1-203ENST00000463511 ATXN2LQ8WWM7 1075 aaKnown RBP27.2■■□□□ 1.94
SSNA1-203ENST00000463511 COPS5Q92905 334 aa27.2■■□□□ 1.94
SSNA1-203ENST00000463511 TTC14Q96N46 770 aa27.2■■□□□ 1.94
SSNA1-203ENST00000463511 MPHOSPH6Q99547 160 aaKnown RBP27.2■■□□□ 1.94
SSNA1-203ENST00000463511 TCF20Q9UGU0 1960 aaKnown RBP27.2■■□□□ 1.94
SSNA1-203ENST00000463511 NKRFO15226 690 aaKnown RBP eCLIP27.19■■□□□ 1.94
SSNA1-203ENST00000463511 ATP2A2P16615 1042 aaKnown RBP27.19■■□□□ 1.94
SSNA1-203ENST00000463511 BRDTQ58F21 947 aaPredicted RBP27.19■■□□□ 1.94
SSNA1-203ENST00000463511 SKAP1Q86WV1 359 aa27.19■■□□□ 1.94
SSNA1-203ENST00000463511 TICAM2Q86XR7 235 aa27.19■■□□□ 1.94
SSNA1-203ENST00000463511 DNERQ8NFT8 737 aa27.19■■□□□ 1.94
SSNA1-203ENST00000463511 RILPL2Q969X0 211 aa27.19■■□□□ 1.94
SSNA1-203ENST00000463511 ZKSCAN3Q9BRR0 538 aa27.19■■□□□ 1.94
SSNA1-203ENST00000463511 CPVLQ9H3G5 476 aa27.19■■□□□ 1.94
SSNA1-203ENST00000463511 PCDHA11Q9Y5I1 949 aa27.19■■□□□ 1.94
SSNA1-203ENST00000463511 MYH7BA7E2Y1 1941 aa27.19■■□□□ 1.94
SSNA1-203ENST00000463511 TNFRSF10AO00220 468 aa27.18■■□□□ 1.94
SSNA1-203ENST00000463511 PFKMP08237 780 aa27.18■■□□□ 1.94
SSNA1-203ENST00000463511 GOLGA8HP0CJ92 632 aa27.18■■□□□ 1.94
SSNA1-203ENST00000463511 PCP11498 1178 aaKnown RBP27.18■■□□□ 1.94
SSNA1-203ENST00000463511 NCOR1O75376 2440 aa27.18■■□□□ 1.94
SSNA1-203ENST00000463511 TXNP10599 105 aaKnown RBP27.17■■□□□ 1.94
SSNA1-203ENST00000463511 ASB2Q96Q27 587 aa27.17■■□□□ 1.94
SSNA1-203ENST00000463511 RNF41Q9H4P4 317 aaPredicted RBP27.17■■□□□ 1.94
SSNA1-203ENST00000463511 XIRP2A4UGR9 3374 aa27.16■■□□□ 1.94
SSNA1-203ENST00000463511 A6NJR5 290 aa27.16■■□□□ 1.94
SSNA1-203ENST00000463511 GPATCH4Q5T3I0 446 aaKnown RBP27.16■■□□□ 1.94
SSNA1-203ENST00000463511 NFRKBQ6P4R8 1299 aa27.16■■□□□ 1.94
SSNA1-203ENST00000463511 MICALL1Q8N3F8 863 aa27.16■■□□□ 1.94
SSNA1-203ENST00000463511 ESR2Q92731 530 aa27.16■■□□□ 1.94
SSNA1-203ENST00000463511 PRRC2BQ5JSZ5 2229 aaKnown RBP27.16■■□□□ 1.94
SSNA1-203ENST00000463511 KPNA6O60684 536 aa27.15■■□□□ 1.94
SSNA1-203ENST00000463511 ARIH2O95376 493 aa27.15■■□□□ 1.94
SSNA1-203ENST00000463511 UBA5Q9GZZ9 404 aa27.15■■□□□ 1.94
SSNA1-203ENST00000463511 COL4A4P53420 1690 aaPredicted RBP27.14■■□□□ 1.94
SSNA1-203ENST00000463511 B4DLN1 442 aa27.14■■□□□ 1.94
SSNA1-203ENST00000463511 ACTN1P12814 892 aa27.14■■□□□ 1.94
SSNA1-203ENST00000463511 MRPL12P52815 198 aaKnown RBP27.14■■□□□ 1.94
SSNA1-203ENST00000463511 CHMP4BP1P59074 171 aa27.14■■□□□ 1.94
SSNA1-203ENST00000463511 MRPS5P82675 430 aaKnown RBP27.14■■□□□ 1.94
SSNA1-203ENST00000463511 TTC22Q5TAA0 569 aa27.14■■□□□ 1.94
SSNA1-203ENST00000463511 PITPNM1O00562 1244 aa27.13■■□□□ 1.93
SSNA1-203ENST00000463511 CA3P07451 260 aa27.13■■□□□ 1.93
SSNA1-203ENST00000463511 RFC2P35250 354 aa27.13■■□□□ 1.93
SSNA1-203ENST00000463511 MFAP1P55081 439 aaKnown RBP27.13■■□□□ 1.93
SSNA1-203ENST00000463511 CDC37Q16543 378 aaPredicted RBP27.13■■□□□ 1.93
SSNA1-203ENST00000463511 TMEM67Q5HYA8 995 aa27.13■■□□□ 1.93
SSNA1-203ENST00000463511 ADAMTS19Q8TE59 1207 aa27.13■■□□□ 1.93
SSNA1-203ENST00000463511 IQCF3P0C7M6 154 aa27.12■■□□□ 1.93
SSNA1-203ENST00000463511 SDSP20132 328 aa27.12■■□□□ 1.93
SSNA1-203ENST00000463511 PTPN11Q06124 597 aaPredicted RBP27.12■■□□□ 1.93
SSNA1-203ENST00000463511 DGKHQ86XP1 1220 aa27.12■■□□□ 1.93
SSNA1-203ENST00000463511 RETREG2Q8NC44 543 aa27.12■■□□□ 1.93
SSNA1-203ENST00000463511 PNMA1Q8ND90 353 aa27.12■■□□□ 1.93
SSNA1-203ENST00000463511 RGS22Q8NE09 1264 aa27.12■■□□□ 1.93
SSNA1-203ENST00000463511 TBC1D5Q92609 795 aa27.12■■□□□ 1.93
SSNA1-203ENST00000463511 NOD1Q9Y239 953 aa27.12■■□□□ 1.93
SSNA1-203ENST00000463511 ZNF213O14771 459 aa27.11■■□□□ 1.93
SSNA1-203ENST00000463511 KDM4AO75164 1064 aa27.11■■□□□ 1.93
SSNA1-203ENST00000463511 GSPT1P15170 499 aaKnown RBP27.11■■□□□ 1.93
SSNA1-203ENST00000463511 SLC9A7Q96T83 725 aa27.11■■□□□ 1.93
SSNA1-203ENST00000463511 COL20A1Q9P218 1284 aa27.11■■□□□ 1.93
SSNA1-203ENST00000463511 ABCB11O95342 1321 aa27.11■■□□□ 1.93
SSNA1-203ENST00000463511 BDP1A6H8Y1 2624 aa27.1■■□□□ 1.93
SSNA1-203ENST00000463511 BFSP2Q13515 415 aa27.1■■□□□ 1.93
SSNA1-203ENST00000463511 CCDC62Q6P9F0 684 aa27.1■■□□□ 1.93
SSNA1-203ENST00000463511 SEPT14Q6ZU15 432 aa27.1■■□□□ 1.93
SSNA1-203ENST00000463511 IQCA1Q86XH1 822 aa27.1■■□□□ 1.93
SSNA1-203ENST00000463511 IL27Q8NEV9 243 aa27.1■■□□□ 1.93
SSNA1-203ENST00000463511 AFG1LQ8WV93 481 aa27.1■■□□□ 1.93
SSNA1-203ENST00000463511 FTOQ9C0B1 505 aaKnown RBP eCLIP27.1■■□□□ 1.93
SSNA1-203ENST00000463511 KAT14Q9H8E8 782 aa27.1■■□□□ 1.93
SSNA1-203ENST00000463511 CERS4Q9HA82 394 aa27.1■■□□□ 1.93
SSNA1-203ENST00000463511 RFXAPO00287 272 aa27.09■■□□□ 1.93
SSNA1-203ENST00000463511 MMP3P08254 477 aa27.09■■□□□ 1.93
SSNA1-203ENST00000463511 LY6KQ17RY6 165 aa27.09■■□□□ 1.93
SSNA1-203ENST00000463511 ADGRF4Q8IZF3 695 aa27.09■■□□□ 1.93
SSNA1-203ENST00000463511 SYTL5Q8TDW5 730 aaPredicted RBP27.09■■□□□ 1.93
SSNA1-203ENST00000463511 TAAR1Q96RJ0 339 aa27.09■■□□□ 1.93
SSNA1-203ENST00000463511 UHRF1Q96T88 793 aaPredicted RBP27.09■■□□□ 1.93
SSNA1-203ENST00000463511 TSPYL2Q9H2G4 693 aaPredicted RBP27.09■■□□□ 1.93
SSNA1-203ENST00000463511 B4E1Z4 1266 aa27.08■■□□□ 1.93
SSNA1-203ENST00000463511 ARHGAP1Q07960 439 aa27.08■■□□□ 1.93
SSNA1-203ENST00000463511 PTGISQ16647 500 aa27.08■■□□□ 1.93
SSNA1-203ENST00000463511 CWC27Q6UX04 472 aaKnown RBP27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms