RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 ZMYM6O95789 1325 aa24.39■■□□□ 1.5
CPSF7-209ENST00000463244 A0A0D9SFI3 127 aa24.39■■□□□ 1.49
CPSF7-209ENST00000463244 KPNA6O60684 536 aa24.39■■□□□ 1.49
CPSF7-209ENST00000463244 SNHG28P0DPA3 235 aa24.39■■□□□ 1.49
CPSF7-209ENST00000463244 PTPN11Q06124 597 aaPredicted RBP24.39■■□□□ 1.49
CPSF7-209ENST00000463244 PPP1R13LQ8WUF5 828 aa24.39■■□□□ 1.49
CPSF7-209ENST00000463244 COPS5Q92905 334 aa24.39■■□□□ 1.49
CPSF7-209ENST00000463244 IQCF3P0C7M6 154 aa24.38■■□□□ 1.49
CPSF7-209ENST00000463244 BMP1P13497 986 aa24.38■■□□□ 1.49
CPSF7-209ENST00000463244 TFF2Q03403 129 aa24.38■■□□□ 1.49
CPSF7-209ENST00000463244 MCMDC2Q4G0Z9 681 aa24.38■■□□□ 1.49
CPSF7-209ENST00000463244 PHOSPHO2Q8TCD6 241 aa24.38■■□□□ 1.49
CPSF7-209ENST00000463244 TTC14Q96N46 770 aa24.38■■□□□ 1.49
CPSF7-209ENST00000463244 MTCH2Q9Y6C9 303 aa24.38■■□□□ 1.49
CPSF7-209ENST00000463244 RFXAPO00287 272 aa24.37■■□□□ 1.49
CPSF7-209ENST00000463244 TXNP10599 105 aaKnown RBP24.37■■□□□ 1.49
CPSF7-209ENST00000463244 HSPD1P10809 573 aaKnown RBP24.37■■□□□ 1.49
CPSF7-209ENST00000463244 PDE1AP54750 535 aa24.37■■□□□ 1.49
CPSF7-209ENST00000463244 ANKRD45Q5TZF3 282 aa24.37■■□□□ 1.49
CPSF7-209ENST00000463244 RETREG2Q8NC44 543 aa24.37■■□□□ 1.49
CPSF7-209ENST00000463244 ZBTB47Q9UFB7 747 aaPredicted RBP24.37■■□□□ 1.49
CPSF7-209ENST00000463244 BRWD1Q9NSI6 2320 aa24.36■■□□□ 1.49
CPSF7-209ENST00000463244 GTPBP6O43824 516 aaPredicted RBP24.36■■□□□ 1.49
CPSF7-209ENST00000463244 ARIH2O95376 493 aa24.36■■□□□ 1.49
CPSF7-209ENST00000463244 HAND2P61296 217 aa24.36■■□□□ 1.49
CPSF7-209ENST00000463244 BFSP2Q13515 415 aa24.36■■□□□ 1.49
CPSF7-209ENST00000463244 AAK1Q2M2I8 961 aa24.36■■□□□ 1.49
CPSF7-209ENST00000463244 ZNF589Q86UQ0 364 aaPredicted RBP24.36■■□□□ 1.49
CPSF7-209ENST00000463244 TICAM2Q86XR7 235 aa24.36■■□□□ 1.49
CPSF7-209ENST00000463244 NECAB3Q96P71 396 aaPredicted RBP24.36■■□□□ 1.49
CPSF7-209ENST00000463244 CERS4Q9HA82 394 aa24.36■■□□□ 1.49
CPSF7-209ENST00000463244 PTPRSQ13332 1948 aa24.35■■□□□ 1.49
CPSF7-209ENST00000463244 EPOPA6NHQ4 379 aa24.35■■□□□ 1.49
CPSF7-209ENST00000463244 B4DLN1 442 aa24.35■■□□□ 1.49
CPSF7-209ENST00000463244 PCP11498 1178 aaKnown RBP24.35■■□□□ 1.49
CPSF7-209ENST00000463244 MRPL12P52815 198 aaKnown RBP24.35■■□□□ 1.49
CPSF7-209ENST00000463244 MFSD6Q6ZSS7 791 aa24.35■■□□□ 1.49
CPSF7-209ENST00000463244 RGS22Q8NE09 1264 aa24.35■■□□□ 1.49
CPSF7-209ENST00000463244 FTOQ9C0B1 505 aaKnown RBP eCLIP24.35■■□□□ 1.49
CPSF7-209ENST00000463244 RAPGEFL1Q9UHV5 662 aa24.35■■□□□ 1.49
CPSF7-209ENST00000463244 TAP1Q03518 808 aa24.34■■□□□ 1.49
CPSF7-209ENST00000463244 SKIV2LQ15477 1246 aaKnown RBP24.34■■□□□ 1.49
CPSF7-209ENST00000463244 HERC6Q8IVU3 1022 aa24.34■■□□□ 1.49
CPSF7-209ENST00000463244 NOD1Q9Y239 953 aa24.34■■□□□ 1.49
CPSF7-209ENST00000463244 KIAA1217Q5T5P2 1943 aa24.33■■□□□ 1.49
CPSF7-209ENST00000463244 BAIAP3O94812 1187 aa24.33■■□□□ 1.49
CPSF7-209ENST00000463244 ARHGEF15O94989 841 aa24.33■■□□□ 1.49
CPSF7-209ENST00000463244 KCNQ1P51787 676 aa24.33■■□□□ 1.49
CPSF7-209ENST00000463244 NMIQ13287 307 aaPredicted RBP24.33■■□□□ 1.49
CPSF7-209ENST00000463244 USH1GQ495M9 461 aa24.33■■□□□ 1.49
CPSF7-209ENST00000463244 GPATCH4Q5T3I0 446 aaKnown RBP24.33■■□□□ 1.49
CPSF7-209ENST00000463244 CCDC62Q6P9F0 684 aa24.33■■□□□ 1.49
CPSF7-209ENST00000463244 TBC1D10CQ8IV04 446 aa24.33■■□□□ 1.49
CPSF7-209ENST00000463244 KIF28PB7ZC32 967 aa24.32■■□□□ 1.48
CPSF7-209ENST00000463244 PTGISQ16647 500 aa24.32■■□□□ 1.48
CPSF7-209ENST00000463244 KRT40Q6A162 431 aa24.32■■□□□ 1.48
CPSF7-209ENST00000463244 CAGE1Q8TC20 777 aa24.32■■□□□ 1.48
CPSF7-209ENST00000463244 ARNTL2Q8WYA1 636 aa24.32■■□□□ 1.48
CPSF7-209ENST00000463244 CTAGE1Q96RT6 745 aa24.32■■□□□ 1.48
CPSF7-209ENST00000463244 CPVLQ9H3G5 476 aa24.32■■□□□ 1.48
CPSF7-209ENST00000463244 CCDC171Q6TFL3 1326 aa24.32■■□□□ 1.48
CPSF7-209ENST00000463244 MYH6P13533 1939 aa24.31■■□□□ 1.48
CPSF7-209ENST00000463244 MMP3P08254 477 aa24.31■■□□□ 1.48
CPSF7-209ENST00000463244 GOLGA8HP0CJ92 632 aa24.31■■□□□ 1.48
CPSF7-209ENST00000463244 SESTD1Q86VW0 696 aa24.31■■□□□ 1.48
CPSF7-209ENST00000463244 AFAP1L1Q8TED9 768 aa24.31■■□□□ 1.48
CPSF7-209ENST00000463244 AFG1LQ8WV93 481 aa24.31■■□□□ 1.48
CPSF7-209ENST00000463244 MAF1Q9H063 256 aa24.31■■□□□ 1.48
CPSF7-209ENST00000463244 RNF41Q9H4P4 317 aaPredicted RBP24.31■■□□□ 1.48
CPSF7-209ENST00000463244 CHMP4BP1P59074 171 aa24.3■■□□□ 1.48
CPSF7-209ENST00000463244 CCDC155Q8N6L0 562 aa24.3■■□□□ 1.48
CPSF7-209ENST00000463244 ESR2Q92731 530 aa24.3■■□□□ 1.48
CPSF7-209ENST00000463244 UBA5Q9GZZ9 404 aa24.3■■□□□ 1.48
CPSF7-209ENST00000463244 COG5Q9UP83 839 aa24.3■■□□□ 1.48
CPSF7-209ENST00000463244 NEDD4P46934 1319 aa24.3■■□□□ 1.48
CPSF7-209ENST00000463244 LAMA4Q16363 1823 aa24.29■■□□□ 1.48
CPSF7-209ENST00000463244 GH1P01241 217 aa24.29■■□□□ 1.48
CPSF7-209ENST00000463244 ARHGAP1Q07960 439 aa24.29■■□□□ 1.48
CPSF7-209ENST00000463244 GPNMBQ14956 572 aa24.29■■□□□ 1.48
CPSF7-209ENST00000463244 CDC37Q16543 378 aaPredicted RBP24.29■■□□□ 1.48
CPSF7-209ENST00000463244 LY6KQ17RY6 165 aa24.29■■□□□ 1.48
CPSF7-209ENST00000463244 GDF6Q6KF10 455 aaPredicted RBP24.29■■□□□ 1.48
CPSF7-209ENST00000463244 SEPT14Q6ZU15 432 aa24.29■■□□□ 1.48
CPSF7-209ENST00000463244 DGKHQ86XP1 1220 aa24.29■■□□□ 1.48
CPSF7-209ENST00000463244 SYTL5Q8TDW5 730 aaPredicted RBP24.29■■□□□ 1.48
CPSF7-209ENST00000463244 TBC1D5Q92609 795 aa24.29■■□□□ 1.48
CPSF7-209ENST00000463244 KAT2BQ92831 832 aa24.29■■□□□ 1.48
CPSF7-209ENST00000463244 ZKSCAN3Q9BRR0 538 aa24.29■■□□□ 1.48
CPSF7-209ENST00000463244 COL4A4P53420 1690 aaPredicted RBP24.29■■□□□ 1.48
CPSF7-209ENST00000463244 TLL1O43897 1013 aa24.28■■□□□ 1.48
CPSF7-209ENST00000463244 KCNJ6P48051 423 aa24.28■■□□□ 1.48
CPSF7-209ENST00000463244 WDR5P61964 334 aaKnown RBP24.28■■□□□ 1.48
CPSF7-209ENST00000463244 NSUN6Q8TEA1 469 aaKnown RBP24.28■■□□□ 1.48
CPSF7-209ENST00000463244 TAAR1Q96RJ0 339 aa24.28■■□□□ 1.48
CPSF7-209ENST00000463244 COL20A1Q9P218 1284 aa24.28■■□□□ 1.48
CPSF7-209ENST00000463244 ABCB11O95342 1321 aa24.28■■□□□ 1.48
CPSF7-209ENST00000463244 LPXNO60711 386 aa24.27■■□□□ 1.48
CPSF7-209ENST00000463244 SELPP16109 830 aa24.27■■□□□ 1.48
CPSF7-209ENST00000463244 RBL2Q08999 1139 aa24.27■■□□□ 1.48
CPSF7-209ENST00000463244 GRB10Q13322 594 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms